RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TBC1D9Q6ZT07 1266 aa21.67■■□□□ 1.06
SMC6-206ENST00000446852 NBPF7P0C2Y1 421 aaPredicted RBP21.67■■□□□ 1.06
SMC6-206ENST00000446852 ZNF496Q96IT1 587 aaPredicted RBP21.67■■□□□ 1.06
SMC6-206ENST00000446852 HYPKQ9NX55 129 aa21.66■■□□□ 1.06
SMC6-206ENST00000446852 TUBGCP6Q96RT7 1819 aa21.66■■□□□ 1.06
SMC6-206ENST00000446852 HSP90AB1P08238 724 aaKnown RBP21.66■■□□□ 1.06
SMC6-206ENST00000446852 DDX21Q9NR30 783 aaKnown RBP eCLIP21.66■■□□□ 1.06
SMC6-206ENST00000446852 MAP3K2Q9Y2U5 619 aa21.66■■□□□ 1.06
SMC6-206ENST00000446852 ROBO1Q9Y6N7 1651 aa21.65■■□□□ 1.06
SMC6-206ENST00000446852 IBTKQ9P2D0 1353 aaPredicted RBP21.65■■□□□ 1.06
SMC6-206ENST00000446852 KSR2Q6VAB6 950 aa21.65■■□□□ 1.06
SMC6-206ENST00000446852 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.06
SMC6-206ENST00000446852 PCDH11XQ9BZA7 1347 aa21.64■■□□□ 1.05
SMC6-206ENST00000446852 PCDH11YQ9BZA8 1340 aa21.64■■□□□ 1.05
SMC6-206ENST00000446852 LARP1Q6PKG0 1096 aaKnown RBP21.64■■□□□ 1.05
SMC6-206ENST00000446852 ZCRB1Q8TBF4 217 aaKnown RBP21.64■■□□□ 1.05
SMC6-206ENST00000446852 CARD10Q9BWT7 1032 aa21.64■■□□□ 1.05
SMC6-206ENST00000446852 SSH3Q8TE77 659 aa21.63■■□□□ 1.05
SMC6-206ENST00000446852 STRN4Q9NRL3 753 aa21.63■■□□□ 1.05
SMC6-206ENST00000446852 CDC45O75419 566 aa21.63■■□□□ 1.05
SMC6-206ENST00000446852 UBR2Q8IWV8 1755 aa21.63■■□□□ 1.05
SMC6-206ENST00000446852 CABP4P57796 275 aa21.62■■□□□ 1.05
SMC6-206ENST00000446852 TTC5Q8N0Z6 440 aa21.62■■□□□ 1.05
SMC6-206ENST00000446852 BECN1Q14457 450 aa21.62■■□□□ 1.05
SMC6-206ENST00000446852 PPP1R42Q7Z4L9 355 aa21.62■■□□□ 1.05
SMC6-206ENST00000446852 LRRCC1Q9C099 1032 aa21.62■■□□□ 1.05
SMC6-206ENST00000446852 SALL3Q9BXA9 1300 aa21.61■■□□□ 1.05
SMC6-206ENST00000446852 IL2RBP14784 551 aa21.61■■□□□ 1.05
SMC6-206ENST00000446852 RBM25P49756 843 aaKnown RBP21.61■■□□□ 1.05
SMC6-206ENST00000446852 PAPPAQ13219 1627 aa21.6■■□□□ 1.05
SMC6-206ENST00000446852 AIMP1Q12904 312 aaKnown RBP21.6■■□□□ 1.05
SMC6-206ENST00000446852 POLA2Q14181 598 aa21.6■■□□□ 1.05
SMC6-206ENST00000446852 CWF19L2Q2TBE0 894 aaKnown RBP21.6■■□□□ 1.05
SMC6-206ENST00000446852 ALDH1L1O75891 902 aa21.6■■□□□ 1.05
SMC6-206ENST00000446852 SNRPA1P09661 255 aaKnown RBP21.6■■□□□ 1.05
SMC6-206ENST00000446852 USP16Q9Y5T5 823 aa21.6■■□□□ 1.05
SMC6-206ENST00000446852 MYL6BP14649 208 aa21.59■■□□□ 1.05
SMC6-206ENST00000446852 SDSP20132 328 aa21.59■■□□□ 1.05
SMC6-206ENST00000446852 PDE1AP54750 535 aa21.59■■□□□ 1.05
SMC6-206ENST00000446852 FMNL2Q96PY5 1086 aa21.59■■□□□ 1.05
SMC6-206ENST00000446852 TBC1D2Q9BYX2 928 aa21.59■■□□□ 1.05
SMC6-206ENST00000446852 OSBPL3Q9H4L5 887 aa21.59■■□□□ 1.05
SMC6-206ENST00000446852 TOGARAM1Q9Y4F4 1720 aa21.59■■□□□ 1.05
SMC6-206ENST00000446852 EVA1CP58658 441 aa21.58■■□□□ 1.05
SMC6-206ENST00000446852 AHDC1Q5TGY3 1603 aaPredicted RBP21.58■■□□□ 1.04
SMC6-206ENST00000446852 SRGAP3O43295 1099 aa21.57■■□□□ 1.04
SMC6-206ENST00000446852 DDX58O95786 925 aaKnown RBP21.57■■□□□ 1.04
SMC6-206ENST00000446852 LRP10Q7Z4F1 713 aa21.57■■□□□ 1.04
SMC6-206ENST00000446852 COL22A1Q8NFW1 1626 aaPredicted RBP21.57■■□□□ 1.04
SMC6-206ENST00000446852 COL14A1Q05707 1796 aaKnown RBP21.57■■□□□ 1.04
SMC6-206ENST00000446852 NKX1-1Q15270 411 aaPredicted RBP21.56■■□□□ 1.04
SMC6-206ENST00000446852 LINS1Q8NG48 757 aa21.56■■□□□ 1.04
SMC6-206ENST00000446852 ARFGEF2Q9Y6D5 1785 aa21.56■■□□□ 1.04
SMC6-206ENST00000446852 PIP4K2AP48426 406 aaPredicted RBP21.56■■□□□ 1.04
SMC6-206ENST00000446852 XAGE3Q8WTP9 111 aa21.56■■□□□ 1.04
SMC6-206ENST00000446852 COL16A1Q07092 1604 aaPredicted RBP21.56■■□□□ 1.04
SMC6-206ENST00000446852 TSHZ3Q63HK5 1081 aa21.55■■□□□ 1.04
SMC6-206ENST00000446852 C9orf78Q9NZ63 289 aaPredicted RBP21.55■■□□□ 1.04
SMC6-206ENST00000446852 LTBP4Q8N2S1 1624 aa21.55■■□□□ 1.04
SMC6-206ENST00000446852 AFDNP55196 1824 aaKnown RBP21.55■■□□□ 1.04
SMC6-206ENST00000446852 DDX54Q8TDD1 881 aaKnown RBP21.55■■□□□ 1.04
SMC6-206ENST00000446852 KCPQ6ZWJ8 1503 aa21.55■■□□□ 1.04
SMC6-206ENST00000446852 ERVV-2B6SEH9 535 aa21.54■■□□□ 1.04
SMC6-206ENST00000446852 COPS6Q7L5N1 327 aa21.54■■□□□ 1.04
SMC6-206ENST00000446852 BTG4Q9NY30 223 aa21.54■■□□□ 1.04
SMC6-206ENST00000446852 SURF6O75683 361 aaKnown RBP21.54■■□□□ 1.04
SMC6-206ENST00000446852 IGKV5-2P06315 115 aa21.54■■□□□ 1.04
SMC6-206ENST00000446852 RIC3Q7Z5B4 369 aa21.54■■□□□ 1.04
SMC6-206ENST00000446852 USP35Q9P2H5 1018 aa21.54■■□□□ 1.04
SMC6-206ENST00000446852 MX1P20591 662 aa21.53■■□□□ 1.04
SMC6-206ENST00000446852 MTX1Q13505 466 aa21.53■■□□□ 1.04
SMC6-206ENST00000446852 KIF2CQ99661 725 aa21.53■■□□□ 1.04
SMC6-206ENST00000446852 IL1RAPL2Q9NP60 686 aa21.53■■□□□ 1.04
SMC6-206ENST00000446852 UTYO14607 1347 aa21.52■■□□□ 1.04
SMC6-206ENST00000446852 GRM8O00222 908 aa21.52■■□□□ 1.04
SMC6-206ENST00000446852 RAB11FIP3O75154 756 aa21.52■■□□□ 1.04
SMC6-206ENST00000446852 KAZALD1Q96I82 304 aa21.51■■□□□ 1.03
SMC6-206ENST00000446852 STAP2Q9UGK3 403 aa21.51■■□□□ 1.03
SMC6-206ENST00000446852 MYT1Q01538 1121 aa21.5■■□□□ 1.03
SMC6-206ENST00000446852 RHPN1Q8TCX5 695 aa21.5■■□□□ 1.03
SMC6-206ENST00000446852 AK9Q5TCS8 1911 aa21.5■■□□□ 1.03
SMC6-206ENST00000446852 METTL22Q9BUU2 404 aaPredicted RBP21.5■■□□□ 1.03
SMC6-206ENST00000446852 TNS2Q63HR2 1409 aa21.49■■□□□ 1.03
SMC6-206ENST00000446852 PLCH1Q4KWH8 1693 aa21.49■■□□□ 1.03
SMC6-206ENST00000446852 NEURL1BA8MQ27 555 aa21.49■■□□□ 1.03
SMC6-206ENST00000446852 SUCLG2Q96I99 432 aa21.49■■□□□ 1.03
SMC6-206ENST00000446852 ITGB4P16144 1822 aa21.49■■□□□ 1.03
SMC6-206ENST00000446852 ANKRD13DQ6ZTN6 518 aa21.49■■□□□ 1.03
SMC6-206ENST00000446852 NUP188Q5SRE5 1749 aa21.48■■□□□ 1.03
SMC6-206ENST00000446852 WNK3Q9BYP7 1800 aa21.48■■□□□ 1.03
SMC6-206ENST00000446852 MYD88Q99836 296 aa21.48■■□□□ 1.03
SMC6-206ENST00000446852 SLKQ9H2G2 1235 aaPredicted RBP21.48■■□□□ 1.03
SMC6-206ENST00000446852 NEXNQ0ZGT2 675 aa21.48■■□□□ 1.03
SMC6-206ENST00000446852 KIF1BPQ96EK5 621 aa21.48■■□□□ 1.03
SMC6-206ENST00000446852 NBPF26B4DH59 902 aa21.47■■□□□ 1.03
SMC6-206ENST00000446852 NBPF14Q5TI25 921 aa21.47■■□□□ 1.03
SMC6-206ENST00000446852 NBPF10Q6P3W6 841 aaKnown RBP21.47■■□□□ 1.03
SMC6-206ENST00000446852 NUTM1Q86Y26 1132 aa21.47■■□□□ 1.03
SMC6-206ENST00000446852 NBPF15Q8N660 670 aa21.47■■□□□ 1.03
SMC6-206ENST00000446852 ANTXR1Q9H6X2 564 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms