RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 EXOC6BQ9Y2D4 811 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 SARNPP82979 210 aaKnown RBP9.13□□□□□ -0.95
SMG1-202ENST00000446231 SYT10Q6XYQ8 523 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 CTAGE9A4FU28 777 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 CTCFLQ8NI51 663 aaPredicted RBP9.13□□□□□ -0.95
SMG1-202ENST00000446231 TXLNAP40222 546 aa9.13□□□□□ -0.95
SMG1-202ENST00000446231 A0A0G2JS52 829 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 IL1RAPL2Q9NP60 686 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 CBX8Q9HC52 389 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 SYCP1Q15431 976 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 NECAB1Q8N987 351 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 TERF2Q15554 542 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 FAM76AQ8TAV0 307 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 INPP5BP32019 993 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 CEP89Q96ST8 783 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 PYCARDQ9ULZ3 195 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 STIM1Q13586 685 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 CEP112Q8N8E3 955 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 USP16Q9Y5T5 823 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 MARCH6O60337 910 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 ABCC11Q96J66 1382 aa9.12□□□□□ -0.95
SMG1-202ENST00000446231 YEATS4O95619 227 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 EZRP15311 586 aaKnown RBP9.11□□□□□ -0.95
SMG1-202ENST00000446231 NEK11Q8NG66 645 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 OAS2P29728 719 aaKnown RBP9.11□□□□□ -0.95
SMG1-202ENST00000446231 UBASH3AP57075 661 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 ESYT1Q9BSJ8 1104 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 DDX41Q9UJV9 622 aaKnown RBP9.11□□□□□ -0.95
SMG1-202ENST00000446231 NEXNQ0ZGT2 675 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 CNTRLQ7Z7A1 2325 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 CLSTN1O94985 981 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 TAF4BQ92750 862 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 ZNF215Q9UL58 517 aaPredicted RBP9.11□□□□□ -0.95
SMG1-202ENST00000446231 EVCP57679 992 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 MRPL50Q8N5N7 158 aaKnown RBP9.11□□□□□ -0.95
SMG1-202ENST00000446231 INSRP06213 1382 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 PHACTR2O75167 634 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 CCDC50Q8IVM0 306 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 SMARCA2P51531 1590 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 CTNNA3Q9UI47 895 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 ICE2Q659A1 982 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 MSL1Q68DK7 614 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 TMEM132EQ6IEE7 984 aa9.11□□□□□ -0.95
SMG1-202ENST00000446231 LOC102724159A0A0B4J2E5 919 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 NAA25Q14CX7 972 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 PWP2Q15269 919 aaKnown RBP9.1□□□□□ -0.95
SMG1-202ENST00000446231 IFNKQ9P0W0 207 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 FGD5Q6ZNL6 1462 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 CDKL5O76039 1030 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 U3KPZ7 1027 aaPredicted RBP9.1□□□□□ -0.95
SMG1-202ENST00000446231 CCDC181Q5TID7 509 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 TUBB2AQ13885 445 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 WASHC4Q2M389 1173 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 TUBB2BQ9BVA1 445 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 SPG7Q9UQ90 795 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 JRKLQ9Y4A0 524 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 SRGAP3O43295 1099 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 OPA1O60313 960 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 GLRX3O76003 335 aaKnown RBP9.1□□□□□ -0.95
SMG1-202ENST00000446231 CHMP4BP1P59074 171 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 SPA17Q15506 151 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 DDX58O95786 925 aaKnown RBP9.1□□□□□ -0.95
SMG1-202ENST00000446231 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMG1-202ENST00000446231 ATP2C2O75185 946 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 AFAP1L1Q8TED9 768 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 EHBP1Q8NDI1 1231 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 SIL1Q9H173 461 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 CLSTN2Q9H4D0 955 aa9.1□□□□□ -0.95
SMG1-202ENST00000446231 BRD3Q15059 726 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 CPLX3Q8WVH0 158 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 CCDC12Q8WUD4 166 aaPredicted RBP9.09□□□□□ -0.95
SMG1-202ENST00000446231 KIAA1524Q8TCG1 905 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 CADPSQ9ULU8 1353 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 RSRC1Q96IZ7 334 aaKnown RBP9.09□□□□□ -0.95
SMG1-202ENST00000446231 DCTPP1Q9H773 170 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 PDE1AP54750 535 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 POTEDQ86YR6 584 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 ATRIPQ8WXE1 791 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 JPH4Q96JJ6 628 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 CCDC114Q96M63 670 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 CKAP4Q07065 602 aaKnown RBP9.09□□□□□ -0.95
SMG1-202ENST00000446231 BRD1O95696 1058 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 SSR1P43307 286 aaKnown RBP9.09□□□□□ -0.95
SMG1-202ENST00000446231 CARMIL2Q6F5E8 1435 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 TAX1BP1Q86VP1 789 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 MIS18AQ9NYP9 233 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 TNNQ9UQP3 1299 aa9.09□□□□□ -0.95
SMG1-202ENST00000446231 HSF2BPO75031 334 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 ZBTB9Q96C00 473 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 LUC7LQ9NQ29 371 aaKnown RBP9.08□□□□□ -0.96
SMG1-202ENST00000446231 C16orf71Q8IYS4 520 aaPredicted RBP9.08□□□□□ -0.96
SMG1-202ENST00000446231 A0A1B0GUA9 196 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 OTUD7AQ8TE49 926 aaPredicted RBP9.08□□□□□ -0.96
SMG1-202ENST00000446231 ERCC6LQ2NKX8 1250 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 EPS15P42566 896 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 NEBLO76041 1014 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 SMC1AQ14683 1233 aaKnown RBP9.08□□□□□ -0.96
SMG1-202ENST00000446231 STK11IPQ8N1F8 1099 aa9.08□□□□□ -0.96
SMG1-202ENST00000446231 IFFO1Q0D2I5 559 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms