RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 KDM3BQ7LBC6 1761 aa24.81■■□□□ 1.56
HDAC4-203ENST00000445704 TMPOP42166 694 aaKnown RBP24.81■■□□□ 1.56
HDAC4-203ENST00000445704 MIS18AQ9NYP9 233 aa24.81■■□□□ 1.56
HDAC4-203ENST00000445704 COL15A1P39059 1388 aa24.8■■□□□ 1.56
HDAC4-203ENST00000445704 PRAMEF22A3QJZ6 481 aa24.8■■□□□ 1.56
HDAC4-203ENST00000445704 STARD3NLO95772 234 aa24.8■■□□□ 1.56
HDAC4-203ENST00000445704 MMP10P09238 476 aa24.8■■□□□ 1.56
HDAC4-203ENST00000445704 RIPK4P57078 832 aa24.8■■□□□ 1.56
HDAC4-203ENST00000445704 CCDC184Q52MB2 194 aa24.8■■□□□ 1.56
HDAC4-203ENST00000445704 CANXP27824 592 aaKnown RBP24.79■■□□□ 1.56
HDAC4-203ENST00000445704 NLGN1Q8N2Q7 840 aa24.79■■□□□ 1.56
HDAC4-203ENST00000445704 TEX13AQ9BXU3 409 aaPredicted RBP24.79■■□□□ 1.56
HDAC4-203ENST00000445704 RRP7AQ9Y3A4 280 aaKnown RBP24.79■■□□□ 1.56
HDAC4-203ENST00000445704 RUNDC1Q96C34 613 aa24.78■■□□□ 1.56
HDAC4-203ENST00000445704 FKBP8Q14318 412 aa24.77■■□□□ 1.56
HDAC4-203ENST00000445704 USP16Q9Y5T5 823 aa24.77■■□□□ 1.56
HDAC4-203ENST00000445704 EIF5P55010 431 aaKnown RBP24.76■■□□□ 1.55
HDAC4-203ENST00000445704 USPL1Q5W0Q7 1092 aa24.76■■□□□ 1.55
HDAC4-203ENST00000445704 CD2APQ9Y5K6 639 aa24.76■■□□□ 1.55
HDAC4-203ENST00000445704 A1BGP04217 495 aa24.75■■□□□ 1.55
HDAC4-203ENST00000445704 DCAF8L1A6NGE4 600 aa24.74■■□□□ 1.55
HDAC4-203ENST00000445704 SNRPA1P09661 255 aaKnown RBP24.74■■□□□ 1.55
HDAC4-203ENST00000445704 NEUROD2Q15784 382 aa24.74■■□□□ 1.55
HDAC4-203ENST00000445704 PNISRQ8TF01 805 aaKnown RBP24.74■■□□□ 1.55
HDAC4-203ENST00000445704 NARFQ9UHQ1 456 aa24.74■■□□□ 1.55
HDAC4-203ENST00000445704 ZPR1O75312 459 aa24.73■■□□□ 1.55
HDAC4-203ENST00000445704 ANP32CO43423 234 aa24.72■■□□□ 1.55
HDAC4-203ENST00000445704 PIP4K2AP48426 406 aaPredicted RBP24.72■■□□□ 1.55
HDAC4-203ENST00000445704 DDR1Q08345 913 aa24.72■■□□□ 1.55
HDAC4-203ENST00000445704 LMOD3Q0VAK6 560 aa24.72■■□□□ 1.55
HDAC4-203ENST00000445704 BCL2L12Q9HB09 334 aa24.72■■□□□ 1.55
HDAC4-203ENST00000445704 TRIM35Q9UPQ4 493 aa24.72■■□□□ 1.55
HDAC4-203ENST00000445704 LAMB4A4D0S4 1761 aa24.72■■□□□ 1.55
HDAC4-203ENST00000445704 KIF13BQ9NQT8 1826 aa24.71■■□□□ 1.55
HDAC4-203ENST00000445704 SCN7AQ01118 1682 aa24.71■■□□□ 1.55
HDAC4-203ENST00000445704 C10orf71Q711Q0 1435 aa24.7■■□□□ 1.55
HDAC4-203ENST00000445704 IL6STP40189 918 aaPredicted RBP24.7■■□□□ 1.54
HDAC4-203ENST00000445704 EIF4A1P60842 406 aaKnown RBP24.7■■□□□ 1.54
HDAC4-203ENST00000445704 ZNF330Q9Y3S2 320 aaPredicted RBP24.7■■□□□ 1.54
HDAC4-203ENST00000445704 PARP3Q9Y6F1 533 aa24.7■■□□□ 1.54
HDAC4-203ENST00000445704 KIAA1551Q9HCM1 1747 aa24.69■■□□□ 1.54
HDAC4-203ENST00000445704 TM4SF1P30408 202 aa24.69■■□□□ 1.54
HDAC4-203ENST00000445704 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
HDAC4-203ENST00000445704 TSPYL4Q9UJ04 414 aa24.68■■□□□ 1.54
HDAC4-203ENST00000445704 A0A087WZG4 1122 aa24.67■■□□□ 1.54
HDAC4-203ENST00000445704 NBPF26B4DH59 902 aa24.67■■□□□ 1.54
HDAC4-203ENST00000445704 POLRMTO00411 1230 aaKnown RBP24.67■■□□□ 1.54
HDAC4-203ENST00000445704 GIGYF1O75420 1035 aaPredicted RBP24.67■■□□□ 1.54
HDAC4-203ENST00000445704 GPR162Q16538 588 aa24.67■■□□□ 1.54
HDAC4-203ENST00000445704 NBPF10Q6P3W6 841 aaKnown RBP24.67■■□□□ 1.54
HDAC4-203ENST00000445704 NBPF15Q8N660 670 aa24.67■■□□□ 1.54
HDAC4-203ENST00000445704 TBC1D2BQ9UPU7 963 aa24.67■■□□□ 1.54
HDAC4-203ENST00000445704 PXDNLA1KZ92 1463 aa24.66■■□□□ 1.54
HDAC4-203ENST00000445704 YBX3P16989 372 aaKnown RBP eCLIP24.66■■□□□ 1.54
HDAC4-203ENST00000445704 NFIXQ14938 502 aa24.66■■□□□ 1.54
HDAC4-203ENST00000445704 BCORQ6W2J9 1755 aa24.65■■□□□ 1.54
HDAC4-203ENST00000445704 APAF1O14727 1248 aa24.65■■□□□ 1.54
HDAC4-203ENST00000445704 MRS2Q9HD23 443 aa24.64■■□□□ 1.54
HDAC4-203ENST00000445704 N4BP2Q86UW6 1770 aaPredicted RBP24.63■■□□□ 1.53
HDAC4-203ENST00000445704 CAMTA2O94983 1202 aa24.63■■□□□ 1.53
HDAC4-203ENST00000445704 BABAM1Q9NWV8 329 aa24.63■■□□□ 1.53
HDAC4-203ENST00000445704 WWC3Q9ULE0 1092 aa24.63■■□□□ 1.53
HDAC4-203ENST00000445704 NRXN2Q9P2S2 1712 aa24.62■■□□□ 1.53
HDAC4-203ENST00000445704 DZIP3Q86Y13 1208 aaKnown RBP24.62■■□□□ 1.53
HDAC4-203ENST00000445704 AFDNP55196 1824 aaKnown RBP24.62■■□□□ 1.53
HDAC4-203ENST00000445704 CHL1O00533 1208 aa24.6■■□□□ 1.53
HDAC4-203ENST00000445704 TBC1D9BQ66K14 1250 aa24.6■■□□□ 1.53
HDAC4-203ENST00000445704 BICDL1Q6ZP65 573 aa24.6■■□□□ 1.53
HDAC4-203ENST00000445704 NPM2Q86SE8 214 aaKnown RBP24.6■■□□□ 1.53
HDAC4-203ENST00000445704 TGFB2P61812 414 aa24.59■■□□□ 1.53
HDAC4-203ENST00000445704 LAS1LQ9Y4W2 734 aaKnown RBP24.59■■□□□ 1.53
HDAC4-203ENST00000445704 A0A0G2JLW4 131 aa24.58■■□□□ 1.53
HDAC4-203ENST00000445704 SERPINB2P05120 415 aa24.58■■□□□ 1.53
HDAC4-203ENST00000445704 YY1P25490 414 aa24.58■■□□□ 1.53
HDAC4-203ENST00000445704 SENP3-EIF4A1A0A087X0R7 540 aa24.57■■□□□ 1.52
HDAC4-203ENST00000445704 DPEP1P16444 411 aa24.57■■□□□ 1.52
HDAC4-203ENST00000445704 KRT24Q2M2I5 525 aa24.57■■□□□ 1.52
HDAC4-203ENST00000445704 CARMIL3Q8ND23 1372 aa24.55■■□□□ 1.52
HDAC4-203ENST00000445704 BRCA1P38398 1863 aaKnown RBP24.55■■□□□ 1.52
HDAC4-203ENST00000445704 CHD4Q14839 1912 aa24.55■■□□□ 1.52
HDAC4-203ENST00000445704 KCNA3P22001 575 aa24.54■■□□□ 1.52
HDAC4-203ENST00000445704 NGEFQ8N5V2 710 aa24.54■■□□□ 1.52
HDAC4-203ENST00000445704 CFAP44Q96MT7 982 aa24.54■■□□□ 1.52
HDAC4-203ENST00000445704 GRIN3BO60391 1043 aa24.53■■□□□ 1.52
HDAC4-203ENST00000445704 MYL6BP14649 208 aa24.53■■□□□ 1.52
HDAC4-203ENST00000445704 EIF2S2P20042 333 aaKnown RBP24.53■■□□□ 1.52
HDAC4-203ENST00000445704 UTRNP46939 3433 aa24.52■■□□□ 1.52
HDAC4-203ENST00000445704 ZNF853P0CG23 659 aa24.52■■□□□ 1.52
HDAC4-203ENST00000445704 CHRNA5P30532 468 aa24.52■■□□□ 1.52
HDAC4-203ENST00000445704 MBIPQ9NS73 344 aa24.52■■□□□ 1.52
HDAC4-203ENST00000445704 ERBB4Q15303 1308 aa24.52■■□□□ 1.52
HDAC4-203ENST00000445704 PDIA6Q15084 440 aa24.51■■□□□ 1.51
HDAC4-203ENST00000445704 CLEC4GQ6UXB4 293 aa24.51■■□□□ 1.51
HDAC4-203ENST00000445704 GOLGB1Q14789 3259 aaKnown RBP24.51■■□□□ 1.51
HDAC4-203ENST00000445704 HLFQ16534 295 aa24.5■■□□□ 1.51
HDAC4-203ENST00000445704 PROSER3Q2NL68 480 aa24.5■■□□□ 1.51
HDAC4-203ENST00000445704 TTLL7Q6ZT98 887 aa24.5■■□□□ 1.51
HDAC4-203ENST00000445704 LRP10Q7Z4F1 713 aa24.5■■□□□ 1.51
HDAC4-203ENST00000445704 NECTIN2Q92692 538 aa24.5■■□□□ 1.51
HDAC4-203ENST00000445704 SETDB2Q96T68 719 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms