RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SART3Q15020 963 aaKnown RBP19.66■□□□□ 0.74
TCOF1-206ENST00000445265 LRRIQ1Q96JM4 1722 aa19.66■□□□□ 0.74
TCOF1-206ENST00000445265 TULP1O00294 542 aaPredicted RBP19.66■□□□□ 0.74
TCOF1-206ENST00000445265 KIF6Q6ZMV9 814 aa19.65■□□□□ 0.74
TCOF1-206ENST00000445265 CEP57L1Q8IYX8 460 aa19.65■□□□□ 0.74
TCOF1-206ENST00000445265 CCDC8Q9H0W5 538 aaPredicted RBP19.65■□□□□ 0.74
TCOF1-206ENST00000445265 USP25Q9UHP3 1055 aa19.65■□□□□ 0.74
TCOF1-206ENST00000445265 FMNL2Q96PY5 1086 aa19.65■□□□□ 0.74
TCOF1-206ENST00000445265 SOS1Q07889 1333 aaPredicted RBP19.65■□□□□ 0.74
TCOF1-206ENST00000445265 CCP110O43303 1012 aa19.64■□□□□ 0.74
TCOF1-206ENST00000445265 SYTL4Q96C24 671 aaPredicted RBP19.64■□□□□ 0.74
TCOF1-206ENST00000445265 XBP1P17861 261 aa19.64■□□□□ 0.73
TCOF1-206ENST00000445265 CCDC57Q2TAC2 916 aa19.64■□□□□ 0.73
TCOF1-206ENST00000445265 CHL1O00533 1208 aa19.64■□□□□ 0.73
TCOF1-206ENST00000445265 CCDC112Q8NEF3 446 aa19.64■□□□□ 0.73
TCOF1-206ENST00000445265 INTS4Q96HW7 963 aaKnown RBP19.64■□□□□ 0.73
TCOF1-206ENST00000445265 GJB2P29033 226 aa19.64■□□□□ 0.73
TCOF1-206ENST00000445265 MAP3K2Q9Y2U5 619 aa19.64■□□□□ 0.73
TCOF1-206ENST00000445265 KIF24Q5T7B8 1368 aa19.63■□□□□ 0.73
TCOF1-206ENST00000445265 ZSCAN22P10073 491 aaPredicted RBP19.63■□□□□ 0.73
TCOF1-206ENST00000445265 VPS37DQ86XT2 251 aa19.63■□□□□ 0.73
TCOF1-206ENST00000445265 DDX54Q8TDD1 881 aaKnown RBP19.63■□□□□ 0.73
TCOF1-206ENST00000445265 DDX11Q96FC9 970 aa19.63■□□□□ 0.73
TCOF1-206ENST00000445265 PLEKHF1Q96S99 279 aa19.63■□□□□ 0.73
TCOF1-206ENST00000445265 UNC13BO14795 1591 aa19.62■□□□□ 0.73
TCOF1-206ENST00000445265 MSH6P52701 1360 aa19.62■□□□□ 0.73
TCOF1-206ENST00000445265 HMGB1P09429 215 aaKnown RBP19.62■□□□□ 0.73
TCOF1-206ENST00000445265 HS1BP3Q53T59 392 aa19.62■□□□□ 0.73
TCOF1-206ENST00000445265 U3KPZ7 1027 aaPredicted RBP19.62■□□□□ 0.73
TCOF1-206ENST00000445265 ZC3H6P61129 1189 aaKnown RBP19.62■□□□□ 0.73
TCOF1-206ENST00000445265 ZSCAN25Q6NSZ9 544 aa19.62■□□□□ 0.73
TCOF1-206ENST00000445265 IPO7O95373 1038 aaKnown RBP19.62■□□□□ 0.73
TCOF1-206ENST00000445265 MYD88Q99836 296 aa19.62■□□□□ 0.73
TCOF1-206ENST00000445265 DDX19AQ9NUU7 478 aaKnown RBP19.62■□□□□ 0.73
TCOF1-206ENST00000445265 CFAP65Q6ZU64 1925 aaKnown RBP19.61■□□□□ 0.73
TCOF1-206ENST00000445265 CAMK4Q16566 473 aa19.61■□□□□ 0.73
TCOF1-206ENST00000445265 TEX35Q5T0J7 233 aa19.61■□□□□ 0.73
TCOF1-206ENST00000445265 ZGPATQ8N5A5 531 aaKnown RBP19.61■□□□□ 0.73
TCOF1-206ENST00000445265 FKBP4Q02790 459 aaKnown RBP eCLIP19.61■□□□□ 0.73
TCOF1-206ENST00000445265 CCDC47Q96A33 483 aaKnown RBP19.61■□□□□ 0.73
TCOF1-206ENST00000445265 ABCC4O15439 1325 aa19.61■□□□□ 0.73
TCOF1-206ENST00000445265 CEBPAP49715 358 aaPredicted RBP19.61■□□□□ 0.73
TCOF1-206ENST00000445265 LARP6Q9BRS8 491 aaKnown RBP19.61■□□□□ 0.73
TCOF1-206ENST00000445265 SHROOM2Q13796 1616 aa19.6■□□□□ 0.73
TCOF1-206ENST00000445265 ALDH1L1O75891 902 aa19.6■□□□□ 0.73
TCOF1-206ENST00000445265 AMOTL1Q8IY63 956 aa19.6■□□□□ 0.73
TCOF1-206ENST00000445265 BRMS1Q9HCU9 246 aa19.6■□□□□ 0.73
TCOF1-206ENST00000445265 CNNM1Q9NRU3 951 aa19.6■□□□□ 0.73
TCOF1-206ENST00000445265 CHMLP26374 656 aa19.6■□□□□ 0.73
TCOF1-206ENST00000445265 HMG20BQ9P0W2 317 aa19.6■□□□□ 0.73
TCOF1-206ENST00000445265 PRIM1P49642 420 aaKnown RBP19.59■□□□□ 0.73
TCOF1-206ENST00000445265 CDKL5O76039 1030 aa19.59■□□□□ 0.73
TCOF1-206ENST00000445265 CHPF2Q9P2E5 772 aa19.59■□□□□ 0.73
TCOF1-206ENST00000445265 UGGT1Q9NYU2 1555 aa19.59■□□□□ 0.73
TCOF1-206ENST00000445265 FOXO3O43524 673 aa19.59■□□□□ 0.73
TCOF1-206ENST00000445265 PDCL3Q9H2J4 239 aa19.59■□□□□ 0.73
TCOF1-206ENST00000445265 ADCY5O95622 1261 aa19.59■□□□□ 0.73
TCOF1-206ENST00000445265 EYA1Q99502 592 aa19.59■□□□□ 0.73
TCOF1-206ENST00000445265 MAP3K19Q56UN5 1328 aa19.58■□□□□ 0.73
TCOF1-206ENST00000445265 NCKAP5LQ9HCH0 1330 aa19.58■□□□□ 0.73
TCOF1-206ENST00000445265 OTUD7AQ8TE49 926 aaPredicted RBP19.58■□□□□ 0.72
TCOF1-206ENST00000445265 IMMTQ16891 758 aaKnown RBP19.58■□□□□ 0.72
TCOF1-206ENST00000445265 TOM1L2Q6ZVM7 507 aa19.58■□□□□ 0.72
TCOF1-206ENST00000445265 USP48Q86UV5 1035 aa19.58■□□□□ 0.72
TCOF1-206ENST00000445265 PDILTQ8N807 584 aa19.58■□□□□ 0.72
TCOF1-206ENST00000445265 TTC41PQ6P2S7 1318 aa19.57■□□□□ 0.72
TCOF1-206ENST00000445265 TET3O43151 1660 aa19.57■□□□□ 0.72
TCOF1-206ENST00000445265 CTAGE5O15320 804 aa19.57■□□□□ 0.72
TCOF1-206ENST00000445265 MARCH6O60337 910 aa19.57■□□□□ 0.72
TCOF1-206ENST00000445265 NOL10Q9BSC4 688 aaKnown RBP19.57■□□□□ 0.72
TCOF1-206ENST00000445265 A0A0U1RQG5 324 aaPredicted RBP19.57■□□□□ 0.72
TCOF1-206ENST00000445265 ANXA1P04083 346 aa19.57■□□□□ 0.72
TCOF1-206ENST00000445265 TNNT3P45378 269 aaPredicted RBP19.57■□□□□ 0.72
TCOF1-206ENST00000445265 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
TCOF1-206ENST00000445265 ZKSCAN5Q9Y2L8 839 aa19.57■□□□□ 0.72
TCOF1-206ENST00000445265 KIF1BO60333 1816 aa19.56■□□□□ 0.72
TCOF1-206ENST00000445265 FILIP1Q7Z7B0 1213 aa19.56■□□□□ 0.72
TCOF1-206ENST00000445265 TRIM22Q8IYM9 498 aa19.56■□□□□ 0.72
TCOF1-206ENST00000445265 KIAA0232Q92628 1395 aa19.56■□□□□ 0.72
TCOF1-206ENST00000445265 HCLS1P14317 486 aaPredicted RBP19.56■□□□□ 0.72
TCOF1-206ENST00000445265 CCDC70Q6NSX1 233 aa19.56■□□□□ 0.72
TCOF1-206ENST00000445265 MAP3K5Q99683 1374 aa19.56■□□□□ 0.72
TCOF1-206ENST00000445265 SERPINC1P01008 464 aa19.56■□□□□ 0.72
TCOF1-206ENST00000445265 NEO1Q92859 1461 aa19.55■□□□□ 0.72
TCOF1-206ENST00000445265 ANO10Q9NW15 660 aa19.55■□□□□ 0.72
TCOF1-206ENST00000445265 BABAM1Q9NWV8 329 aa19.55■□□□□ 0.72
TCOF1-206ENST00000445265 CLASP1Q7Z460 1538 aa19.55■□□□□ 0.72
TCOF1-206ENST00000445265 G2E3Q7L622 706 aa19.55■□□□□ 0.72
TCOF1-206ENST00000445265 AKAP2Q9Y2D5 859 aa19.55■□□□□ 0.72
TCOF1-206ENST00000445265 POLR1AO95602 1720 aaPredicted RBP19.55■□□□□ 0.72
TCOF1-206ENST00000445265 CAVIN2O95810 425 aa19.55■□□□□ 0.72
TCOF1-206ENST00000445265 NACAP1Q9BZK3 213 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 ZFYVE16Q7Z3T8 1539 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 RRAGDQ9NQL2 400 aaPredicted RBP19.54■□□□□ 0.72
TCOF1-206ENST00000445265 A0A087WZG4 1122 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 CBFA2T2O43439 604 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 IFIT1P09914 478 aaKnown RBP19.54■□□□□ 0.72
TCOF1-206ENST00000445265 KSR2Q6VAB6 950 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 CKAP2LQ8IYA6 745 aa19.54■□□□□ 0.72
TCOF1-206ENST00000445265 PRDM11Q9NQV5 511 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms