RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ALDH1L1O75891 902 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 BEND3Q5T5X7 828 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 KSR2Q6VAB6 950 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 TBC1D32Q96NH3 1257 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 SNRPA1P09661 255 aaKnown RBP19.46■□□□□ 0.71
SNX13-204ENST00000444712 IBTKQ9P2D0 1353 aaPredicted RBP19.46■□□□□ 0.71
SNX13-204ENST00000444712 PLCH1Q4KWH8 1693 aa19.46■□□□□ 0.71
SNX13-204ENST00000444712 ERVV-2B6SEH9 535 aa19.46■□□□□ 0.71
SNX13-204ENST00000444712 NKX1-1Q15270 411 aaPredicted RBP19.46■□□□□ 0.71
SNX13-204ENST00000444712 PLEKHM2Q8IWE5 1019 aa19.45■□□□□ 0.7
SNX13-204ENST00000444712 LRRFIP2Q9Y608 721 aaKnown RBP19.45■□□□□ 0.7
SNX13-204ENST00000444712 SLC39A6Q13433 755 aa19.44■□□□□ 0.7
SNX13-204ENST00000444712 STRN4Q9NRL3 753 aa19.44■□□□□ 0.7
SNX13-204ENST00000444712 BECN1Q14457 450 aa19.43■□□□□ 0.7
SNX13-204ENST00000444712 ZNF496Q96IT1 587 aaPredicted RBP19.43■□□□□ 0.7
SNX13-204ENST00000444712 PHLPP1O60346 1717 aa19.42■□□□□ 0.7
SNX13-204ENST00000444712 ANXA1P04083 346 aa19.42■□□□□ 0.7
SNX13-204ENST00000444712 LARP1Q6PKG0 1096 aaKnown RBP19.42■□□□□ 0.7
SNX13-204ENST00000444712 MAP3K2Q9Y2U5 619 aa19.42■□□□□ 0.7
SNX13-204ENST00000444712 WNK3Q9BYP7 1800 aa19.42■□□□□ 0.7
SNX13-204ENST00000444712 GLI3P10071 1580 aa19.42■□□□□ 0.7
SNX13-204ENST00000444712 ERBB4Q15303 1308 aa19.42■□□□□ 0.7
SNX13-204ENST00000444712 TTC22Q5TAA0 569 aa19.42■□□□□ 0.7
SNX13-204ENST00000444712 COL16A1Q07092 1604 aaPredicted RBP19.41■□□□□ 0.7
SNX13-204ENST00000444712 PRAMEF22A3QJZ6 481 aa19.41■□□□□ 0.7
SNX13-204ENST00000444712 SSH3Q8TE77 659 aa19.41■□□□□ 0.7
SNX13-204ENST00000444712 LRRCC1Q9C099 1032 aa19.41■□□□□ 0.7
SNX13-204ENST00000444712 CDC45O75419 566 aa19.41■□□□□ 0.7
SNX13-204ENST00000444712 MFAP1P55081 439 aaKnown RBP19.41■□□□□ 0.7
SNX13-204ENST00000444712 PDIA6Q15084 440 aa19.41■□□□□ 0.7
SNX13-204ENST00000444712 PROSER3Q2NL68 480 aa19.41■□□□□ 0.7
SNX13-204ENST00000444712 LINS1Q8NG48 757 aa19.41■□□□□ 0.7
SNX13-204ENST00000444712 RAB11FIP3O75154 756 aa19.4■□□□□ 0.7
SNX13-204ENST00000444712 C22orf23Q9BZE7 217 aa19.4■□□□□ 0.7
SNX13-204ENST00000444712 OSBPL3Q9H4L5 887 aa19.4■□□□□ 0.7
SNX13-204ENST00000444712 PNMA6EA0A0J9YXQ4 647 aa19.39■□□□□ 0.69
SNX13-204ENST00000444712 NEXNQ0ZGT2 675 aa19.39■□□□□ 0.69
SNX13-204ENST00000444712 POLA2Q14181 598 aa19.39■□□□□ 0.69
SNX13-204ENST00000444712 HSP90AB4PQ58FF6 505 aa19.39■□□□□ 0.69
SNX13-204ENST00000444712 BTG4Q9NY30 223 aa19.39■□□□□ 0.69
SNX13-204ENST00000444712 C9orf78Q9NZ63 289 aaPredicted RBP19.39■□□□□ 0.69
SNX13-204ENST00000444712 ARFGEF2Q9Y6D5 1785 aa19.38■□□□□ 0.69
SNX13-204ENST00000444712 TOGARAM1Q9Y4F4 1720 aa19.38■□□□□ 0.69
SNX13-204ENST00000444712 AFDNP55196 1824 aaKnown RBP19.38■□□□□ 0.69
SNX13-204ENST00000444712 RIC3Q7Z5B4 369 aa19.37■□□□□ 0.69
SNX13-204ENST00000444712 EXOC6BQ9Y2D4 811 aa19.37■□□□□ 0.69
SNX13-204ENST00000444712 TUBGCP6Q96RT7 1819 aa19.37■□□□□ 0.69
SNX13-204ENST00000444712 APBB1O00213 710 aa19.37■□□□□ 0.69
SNX13-204ENST00000444712 NBPF7P0C2Y1 421 aaPredicted RBP19.37■□□□□ 0.69
SNX13-204ENST00000444712 MTX1Q13505 466 aa19.37■□□□□ 0.69
SNX13-204ENST00000444712 CASC1Q6TDU7 716 aa19.37■□□□□ 0.69
SNX13-204ENST00000444712 KCPQ6ZWJ8 1503 aa19.37■□□□□ 0.69
SNX13-204ENST00000444712 LRP6O75581 1613 aa19.37■□□□□ 0.69
SNX13-204ENST00000444712 SMARCA5O60264 1052 aaPredicted RBP19.36■□□□□ 0.69
SNX13-204ENST00000444712 GSPT1P15170 499 aaKnown RBP19.36■□□□□ 0.69
SNX13-204ENST00000444712 PPP1R42Q7Z4L9 355 aa19.36■□□□□ 0.69
SNX13-204ENST00000444712 UTYO14607 1347 aa19.36■□□□□ 0.69
SNX13-204ENST00000444712 TBC1D9Q6ZT07 1266 aa19.35■□□□□ 0.69
SNX13-204ENST00000444712 DISP2A7MBM2 1401 aa19.35■□□□□ 0.69
SNX13-204ENST00000444712 TNS2Q63HR2 1409 aa19.35■□□□□ 0.69
SNX13-204ENST00000444712 AIMP1Q12904 312 aaKnown RBP19.35■□□□□ 0.69
SNX13-204ENST00000444712 AEBP2Q6ZN18 517 aaPredicted RBP19.35■□□□□ 0.69
SNX13-204ENST00000444712 C16orf71Q8IYS4 520 aaPredicted RBP19.35■□□□□ 0.69
SNX13-204ENST00000444712 DDX54Q8TDD1 881 aaKnown RBP19.35■□□□□ 0.69
SNX13-204ENST00000444712 AOX1Q06278 1338 aa19.35■□□□□ 0.69
SNX13-204ENST00000444712 SRGAP3O43295 1099 aa19.34■□□□□ 0.69
SNX13-204ENST00000444712 MYL6BP14649 208 aa19.34■□□□□ 0.69
SNX13-204ENST00000444712 RBM25P49756 843 aaKnown RBP19.34■□□□□ 0.69
SNX13-204ENST00000444712 XAGE3Q8WTP9 111 aa19.34■□□□□ 0.69
SNX13-204ENST00000444712 USP16Q9Y5T5 823 aa19.34■□□□□ 0.69
SNX13-204ENST00000444712 ITGB4P16144 1822 aa19.34■□□□□ 0.69
SNX13-204ENST00000444712 GRM8O00222 908 aa19.34■□□□□ 0.69
SNX13-204ENST00000444712 PDE1AP54750 535 aa19.34■□□□□ 0.69
SNX13-204ENST00000444712 METTL22Q9BUU2 404 aaPredicted RBP19.34■□□□□ 0.69
SNX13-204ENST00000444712 NRAPQ86VF7 1730 aa19.33■□□□□ 0.69
SNX13-204ENST00000444712 COPS6Q7L5N1 327 aa19.33■□□□□ 0.68
SNX13-204ENST00000444712 ANKRD13DQ6ZTN6 518 aa19.32■□□□□ 0.68
SNX13-204ENST00000444712 KIF1BPQ96EK5 621 aa19.32■□□□□ 0.68
SNX13-204ENST00000444712 SALL3Q9BXA9 1300 aa19.32■□□□□ 0.68
SNX13-204ENST00000444712 NWD2Q9ULI1 1742 aa19.32■□□□□ 0.68
SNX13-204ENST00000444712 SURF6O75683 361 aaKnown RBP19.32■□□□□ 0.68
SNX13-204ENST00000444712 LRP10Q7Z4F1 713 aa19.32■□□□□ 0.68
SNX13-204ENST00000444712 OTUD7AQ8TE49 926 aaPredicted RBP19.32■□□□□ 0.68
SNX13-204ENST00000444712 TMOD3Q9NYL9 352 aa19.32■□□□□ 0.68
SNX13-204ENST00000444712 NUP188Q5SRE5 1749 aa19.31■□□□□ 0.68
SNX13-204ENST00000444712 MX1P20591 662 aa19.31■□□□□ 0.68
SNX13-204ENST00000444712 MYT1Q01538 1121 aa19.31■□□□□ 0.68
SNX13-204ENST00000444712 CWF19L2Q2TBE0 894 aaKnown RBP19.3■□□□□ 0.68
SNX13-204ENST00000444712 CDCA7Q9BWT1 371 aaPredicted RBP19.3■□□□□ 0.68
SNX13-204ENST00000444712 STAP2Q9UGK3 403 aa19.3■□□□□ 0.68
SNX13-204ENST00000444712 AK9Q5TCS8 1911 aa19.3■□□□□ 0.68
SNX13-204ENST00000444712 SDSP20132 328 aa19.3■□□□□ 0.68
SNX13-204ENST00000444712 ERC1Q8IUD2 1116 aa19.3■□□□□ 0.68
SNX13-204ENST00000444712 USP35Q9P2H5 1018 aa19.3■□□□□ 0.68
SNX13-204ENST00000444712 NEURL1BA8MQ27 555 aa19.29■□□□□ 0.68
SNX13-204ENST00000444712 TOM1O60784 492 aa19.29■□□□□ 0.68
SNX13-204ENST00000444712 PLBD2Q8NHP8 589 aa19.29■□□□□ 0.68
SNX13-204ENST00000444712 RHPN1Q8TCX5 695 aa19.29■□□□□ 0.68
SNX13-204ENST00000444712 TEX13AQ9BXU3 409 aaPredicted RBP19.29■□□□□ 0.68
SNX13-204ENST00000444712 BCL11AQ9H165 835 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms