RNA–Protein interactions for RNA: ENST00000440234.6

RBM38-205, Transcript of RNA binding motif protein 38, humanhuman

TSL 2 BASIC

Gene RBM38, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-205ENST00000440234 TEFQ10587 303 aa29.43■■■□□ 2.3
RBM38-205ENST00000440234 USPL1Q5W0Q7 1092 aa29.43■■■□□ 2.3
RBM38-205ENST00000440234 GPBP1L1Q9HC44 474 aaPredicted RBP29.43■■■□□ 2.3
RBM38-205ENST00000440234 ZBTB1Q9Y2K1 713 aa29.43■■■□□ 2.3
RBM38-205ENST00000440234 PHACTR3Q96KR7 559 aa29.42■■■□□ 2.3
RBM38-205ENST00000440234 NARFQ9UHQ1 456 aa29.42■■■□□ 2.3
RBM38-205ENST00000440234 NUDCQ9Y266 331 aa29.42■■■□□ 2.3
RBM38-205ENST00000440234 POLRMTO00411 1230 aaKnown RBP29.4■■■□□ 2.3
RBM38-205ENST00000440234 FCHSD2O94868 740 aa29.4■■■□□ 2.3
RBM38-205ENST00000440234 STARD3NLO95772 234 aa29.4■■■□□ 2.3
RBM38-205ENST00000440234 PRKAR2BP31323 418 aa29.4■■■□□ 2.3
RBM38-205ENST00000440234 ZNF790Q6PG37 636 aa29.4■■■□□ 2.3
RBM38-205ENST00000440234 RSPH6AQ9H0K4 717 aa29.4■■■□□ 2.3
RBM38-205ENST00000440234 ZNF496Q96IT1 587 aaPredicted RBP29.39■■■□□ 2.3
RBM38-205ENST00000440234 KIAA1551Q9HCM1 1747 aa29.39■■■□□ 2.3
RBM38-205ENST00000440234 ARHGAP27Q6ZUM4 889 aa29.38■■■□□ 2.29
RBM38-205ENST00000440234 ZNF526Q8TF50 670 aaPredicted RBP29.38■■■□□ 2.29
RBM38-205ENST00000440234 PIM2Q9P1W9 311 aa29.38■■■□□ 2.29
RBM38-205ENST00000440234 N4BP2Q86UW6 1770 aaPredicted RBP29.37■■■□□ 2.29
RBM38-205ENST00000440234 CANXP27824 592 aaKnown RBP29.37■■■□□ 2.29
RBM38-205ENST00000440234 COL15A1P39059 1388 aa29.37■■■□□ 2.29
RBM38-205ENST00000440234 NFIXQ14938 502 aa29.36■■■□□ 2.29
RBM38-205ENST00000440234 TEX13AQ9BXU3 409 aaPredicted RBP29.36■■■□□ 2.29
RBM38-205ENST00000440234 U2AF1L5P0DN76 240 aaPredicted RBP29.35■■■□□ 2.29
RBM38-205ENST00000440234 U2AF1Q01081 240 aaKnown RBP eCLIP29.35■■■□□ 2.29
RBM38-205ENST00000440234 BCL2L12Q9HB09 334 aa29.35■■■□□ 2.29
RBM38-205ENST00000440234 EIF5P55010 431 aaKnown RBP29.34■■■□□ 2.29
RBM38-205ENST00000440234 CEMIPQ8WUJ3 1361 aa29.34■■■□□ 2.29
RBM38-205ENST00000440234 HEG1Q9ULI3 1381 aa29.34■■■□□ 2.29
RBM38-205ENST00000440234 VIRMAQ69YN4 1812 aaKnown RBP29.34■■■□□ 2.29
RBM38-205ENST00000440234 CHRNA5P30532 468 aa29.32■■■□□ 2.28
RBM38-205ENST00000440234 DALRD3Q5D0E6 543 aaKnown RBP29.32■■■□□ 2.28
RBM38-205ENST00000440234 A0A087WZG4 1122 aa29.31■■■□□ 2.28
RBM38-205ENST00000440234 FMNL2Q96PY5 1086 aa29.31■■■□□ 2.28
RBM38-205ENST00000440234 BTBD11A6QL63 1104 aa29.3■■■□□ 2.28
RBM38-205ENST00000440234 UBR2Q8IWV8 1755 aa29.29■■■□□ 2.28
RBM38-205ENST00000440234 SERPINB2P05120 415 aa29.29■■■□□ 2.28
RBM38-205ENST00000440234 MRS2Q9HD23 443 aa29.29■■■□□ 2.28
RBM38-205ENST00000440234 KCNQ3O43525 872 aa29.28■■■□□ 2.28
RBM38-205ENST00000440234 RTF1Q92541 710 aaKnown RBP29.27■■■□□ 2.28
RBM38-205ENST00000440234 IL6STP40189 918 aaPredicted RBP29.26■■■□□ 2.27
RBM38-205ENST00000440234 MIER1Q8N108 512 aa29.26■■■□□ 2.27
RBM38-205ENST00000440234 KIF3CO14782 793 aa29.24■■■□□ 2.27
RBM38-205ENST00000440234 A1BGP04217 495 aa29.24■■■□□ 2.27
RBM38-205ENST00000440234 WDR43Q15061 677 aaKnown RBP eCLIP29.24■■■□□ 2.27
RBM38-205ENST00000440234 CCDC184Q52MB2 194 aa29.24■■■□□ 2.27
RBM38-205ENST00000440234 BRCA1P38398 1863 aaKnown RBP29.23■■■□□ 2.27
RBM38-205ENST00000440234 CCER2I3L3R5 266 aa29.23■■■□□ 2.27
RBM38-205ENST00000440234 HTATSF1O43719 755 aaKnown RBP29.23■■■□□ 2.27
RBM38-205ENST00000440234 C9orf131Q5VYM1 1079 aa29.23■■■□□ 2.27
RBM38-205ENST00000440234 BICDL1Q6ZP65 573 aa29.23■■■□□ 2.27
RBM38-205ENST00000440234 MCM10Q7L590 875 aa29.23■■■□□ 2.27
RBM38-205ENST00000440234 TBC1D2BQ9UPU7 963 aa29.23■■■□□ 2.27
RBM38-205ENST00000440234 ZNF330Q9Y3S2 320 aaPredicted RBP29.22■■■□□ 2.27
RBM38-205ENST00000440234 SIPA1L3O60292 1781 aaPredicted RBP29.21■■■□□ 2.27
RBM38-205ENST00000440234 TBC1D9BQ66K14 1250 aa29.21■■■□□ 2.27
RBM38-205ENST00000440234 NPM2Q86SE8 214 aaKnown RBP29.21■■■□□ 2.27
RBM38-205ENST00000440234 USP16Q9Y5T5 823 aa29.21■■■□□ 2.27
RBM38-205ENST00000440234 DCTN1Q14203 1278 aa29.19■■■□□ 2.26
RBM38-205ENST00000440234 H0YIN7 160 aa29.17■■■□□ 2.26
RBM38-205ENST00000440234 SNRPA1P09661 255 aaKnown RBP29.17■■■□□ 2.26
RBM38-205ENST00000440234 C2CD5Q86YS7 1000 aa29.17■■■□□ 2.26
RBM38-205ENST00000440234 ARFGEF1Q9Y6D6 1849 aa29.17■■■□□ 2.26
RBM38-205ENST00000440234 TTLL6Q8N841 843 aa29.16■■■□□ 2.26
RBM38-205ENST00000440234 NRXN2Q9P2S2 1712 aa29.16■■■□□ 2.26
RBM38-205ENST00000440234 AFDNP55196 1824 aaKnown RBP29.15■■■□□ 2.26
RBM38-205ENST00000440234 PRAMEF22A3QJZ6 481 aa29.15■■■□□ 2.26
RBM38-205ENST00000440234 CAMTA2O94983 1202 aa29.15■■■□□ 2.26
RBM38-205ENST00000440234 HSPA6P17066 643 aa29.15■■■□□ 2.26
RBM38-205ENST00000440234 TAF7Q15545 349 aaPredicted RBP29.15■■■□□ 2.26
RBM38-205ENST00000440234 NEFMP07197 916 aa29.14■■■□□ 2.26
RBM38-205ENST00000440234 PNNQ9H307 717 aaKnown RBP29.14■■■□□ 2.26
RBM38-205ENST00000440234 RNF181Q9P0P0 153 aa29.14■■■□□ 2.26
RBM38-205ENST00000440234 CARMIL3Q8ND23 1372 aa29.13■■■□□ 2.25
RBM38-205ENST00000440234 DZIP3Q86Y13 1208 aaKnown RBP29.13■■■□□ 2.25
RBM38-205ENST00000440234 SETDB2Q96T68 719 aa29.13■■■□□ 2.25
RBM38-205ENST00000440234 BRIP1Q9BX63 1249 aa29.13■■■□□ 2.25
RBM38-205ENST00000440234 NMRK2Q9NPI5 230 aa29.13■■■□□ 2.25
RBM38-205ENST00000440234 TOMM70O94826 608 aa29.12■■■□□ 2.25
RBM38-205ENST00000440234 PRR5LQ6MZQ0 368 aa29.12■■■□□ 2.25
RBM38-205ENST00000440234 PNISRQ8TF01 805 aaKnown RBP29.12■■■□□ 2.25
RBM38-205ENST00000440234 PDZRN3Q9UPQ7 1066 aa29.12■■■□□ 2.25
RBM38-205ENST00000440234 PDE6BP35913 854 aa29.11■■■□□ 2.25
RBM38-205ENST00000440234 PIP4K2AP48426 406 aaPredicted RBP29.11■■■□□ 2.25
RBM38-205ENST00000440234 PLEKHF1Q96S99 279 aa29.1■■■□□ 2.25
RBM38-205ENST00000440234 ADAMTS8Q9UP79 889 aa29.1■■■□□ 2.25
RBM38-205ENST00000440234 CCDC24Q8N4L8 307 aa29.09■■■□□ 2.25
RBM38-205ENST00000440234 MIS18AQ9NYP9 233 aa29.09■■■□□ 2.25
RBM38-205ENST00000440234 CLEC4GQ6UXB4 293 aa29.08■■■□□ 2.25
RBM38-205ENST00000440234 RASSF7Q02833 373 aa29.07■■■□□ 2.24
RBM38-205ENST00000440234 KDM2BQ8NHM5 1336 aa29.06■■■□□ 2.24
RBM38-205ENST00000440234 NBPF26B4DH59 902 aa29.06■■■□□ 2.24
RBM38-205ENST00000440234 LMNB1P20700 586 aa29.06■■■□□ 2.24
RBM38-205ENST00000440234 NBPF10Q6P3W6 841 aaKnown RBP29.06■■■□□ 2.24
RBM38-205ENST00000440234 NBPF15Q8N660 670 aa29.06■■■□□ 2.24
RBM38-205ENST00000440234 CNBD1Q8NA66 436 aa29.06■■■□□ 2.24
RBM38-205ENST00000440234 ZNF622Q969S3 477 aaKnown RBP eCLIP29.06■■■□□ 2.24
RBM38-205ENST00000440234 MAPK8IP3Q9UPT6 1336 aa29.05■■■□□ 2.24
RBM38-205ENST00000440234 FAM9BQ8IZU0 186 aa29.05■■■□□ 2.24
RBM38-205ENST00000440234 NPHP1O15259 732 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms