RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 OGFRQ9NZT2 677 aa13.89□□□□□ -0.19
SMPD4-209ENST00000439886 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
SMPD4-209ENST00000439886 BECN2A8MW95 431 aa13.88□□□□□ -0.19
SMPD4-209ENST00000439886 TPM3P06753 285 aa13.88□□□□□ -0.19
SMPD4-209ENST00000439886 CLIP2Q9UDT6 1046 aa13.88□□□□□ -0.19
SMPD4-209ENST00000439886 PNMA6EA0A0J9YXQ4 647 aa13.88□□□□□ -0.19
SMPD4-209ENST00000439886 PPFIA3O75145 1194 aa13.88□□□□□ -0.19
SMPD4-209ENST00000439886 LIMCH1Q9UPQ0 1083 aa13.88□□□□□ -0.19
SMPD4-209ENST00000439886 LRRFIP2Q9Y608 721 aaKnown RBP13.88□□□□□ -0.19
SMPD4-209ENST00000439886 SHPRHQ149N8 1683 aa13.88□□□□□ -0.19
SMPD4-209ENST00000439886 NCBP1Q09161 790 aaKnown RBP13.88□□□□□ -0.19
SMPD4-209ENST00000439886 CUL4AQ13619 759 aa13.88□□□□□ -0.19
SMPD4-209ENST00000439886 MLECQ14165 292 aa13.88□□□□□ -0.19
SMPD4-209ENST00000439886 AXDND1Q5T1B0 1012 aaPredicted RBP13.88□□□□□ -0.19
SMPD4-209ENST00000439886 PRPF40BQ6NWY9 871 aaKnown RBP13.88□□□□□ -0.19
SMPD4-209ENST00000439886 DACT1Q9NYF0 836 aa13.87□□□□□ -0.19
SMPD4-209ENST00000439886 TRPM2O94759 1503 aa13.87□□□□□ -0.19
SMPD4-209ENST00000439886 FAM43BQ6ZT52 329 aaPredicted RBP13.87□□□□□ -0.19
SMPD4-209ENST00000439886 DNAJC25Q9H1X3 360 aa13.87□□□□□ -0.19
SMPD4-209ENST00000439886 PREX2Q70Z35 1606 aa13.87□□□□□ -0.19
SMPD4-209ENST00000439886 RTL1A6NKG5 1358 aa13.87□□□□□ -0.19
SMPD4-209ENST00000439886 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
SMPD4-209ENST00000439886 EIF2S2P20042 333 aaKnown RBP13.86□□□□□ -0.19
SMPD4-209ENST00000439886 TYRO3Q06418 890 aa13.86□□□□□ -0.19
SMPD4-209ENST00000439886 PLCH2O75038 1416 aa13.86□□□□□ -0.19
SMPD4-209ENST00000439886 CEP135Q66GS9 1140 aa13.86□□□□□ -0.19
SMPD4-209ENST00000439886 PDRG1Q9NUG6 133 aa13.86□□□□□ -0.19
SMPD4-209ENST00000439886 CCDC9Q9Y3X0 531 aaKnown RBP13.86□□□□□ -0.19
SMPD4-209ENST00000439886 LIG1P18858 919 aa13.86□□□□□ -0.19
SMPD4-209ENST00000439886 KRT85P78386 507 aa13.86□□□□□ -0.19
SMPD4-209ENST00000439886 BANK1Q8NDB2 785 aa13.86□□□□□ -0.19
SMPD4-209ENST00000439886 ZNF526Q8TF50 670 aaPredicted RBP13.86□□□□□ -0.19
SMPD4-209ENST00000439886 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
SMPD4-209ENST00000439886 IL25Q9H293 177 aa13.86□□□□□ -0.19
SMPD4-209ENST00000439886 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 FAM200AQ8TCP9 573 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 SPTLC3Q9NUV7 552 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 POLR3GO15318 223 aaPredicted RBP13.85□□□□□ -0.19
SMPD4-209ENST00000439886 LARGE1O95461 756 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 ZNF165P49910 485 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 SPATA32Q96LK8 384 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 FEZ1Q99689 392 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 SBNO2Q9Y2G9 1366 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 A0A087WWV3 80 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 FOXO3O43524 673 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 UBTFL1P0CB47 393 aaPredicted RBP13.85□□□□□ -0.19
SMPD4-209ENST00000439886 GTF2F1P35269 517 aaKnown RBP eCLIP13.85□□□□□ -0.197e-8■■□□□ 11.7
SMPD4-209ENST00000439886 PTPN14Q15678 1187 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 ZRSR1Q15695 479 aaKnown RBP13.85□□□□□ -0.19
SMPD4-209ENST00000439886 ST7Q9NRC1 585 aa13.85□□□□□ -0.19
SMPD4-209ENST00000439886 ABCA6Q8N139 1617 aa13.84□□□□□ -0.19
SMPD4-209ENST00000439886 PSEN1P49768 467 aa13.84□□□□□ -0.19
SMPD4-209ENST00000439886 GTF3C6Q969F1 213 aa13.84□□□□□ -0.19
SMPD4-209ENST00000439886 IDI1Q13907 227 aa13.84□□□□□ -0.19
SMPD4-209ENST00000439886 ARID5BQ14865 1188 aa13.84□□□□□ -0.19
SMPD4-209ENST00000439886 SMTNL1A8MU46 457 aa13.83□□□□□ -0.19
SMPD4-209ENST00000439886 ELF2Q15723 593 aa13.83□□□□□ -0.19
SMPD4-209ENST00000439886 KRT222Q8N1A0 295 aa13.83□□□□□ -0.19
SMPD4-209ENST00000439886 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.19
SMPD4-209ENST00000439886 TMX1Q9H3N1 280 aa13.83□□□□□ -0.19
SMPD4-209ENST00000439886 CBX8Q9HC52 389 aa13.83□□□□□ -0.19
SMPD4-209ENST00000439886 SNX14Q9Y5W7 946 aa13.83□□□□□ -0.19
SMPD4-209ENST00000439886 ZNF215Q9UL58 517 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-209ENST00000439886 H3BQV1 296 aa13.83□□□□□ -0.2
SMPD4-209ENST00000439886 CCT4P50991 539 aaKnown RBP13.83□□□□□ -0.2
SMPD4-209ENST00000439886 BRPF1P55201 1214 aaPredicted RBP13.83□□□□□ -0.2
SMPD4-209ENST00000439886 ANAPC15P60006 121 aa13.83□□□□□ -0.2
SMPD4-209ENST00000439886 IFFO2Q5TF58 517 aa13.83□□□□□ -0.2
SMPD4-209ENST00000439886 RUFY3Q7L099 469 aa13.83□□□□□ -0.2
SMPD4-209ENST00000439886 HOMER1Q86YM7 354 aa13.83□□□□□ -0.2
SMPD4-209ENST00000439886 DDX11Q96FC9 970 aa13.83□□□□□ -0.2
SMPD4-209ENST00000439886 CYP46A1Q9Y6A2 500 aa13.83□□□□□ -0.2
SMPD4-209ENST00000439886 MMP14P50281 582 aa13.82□□□□□ -0.2
SMPD4-209ENST00000439886 SPHKAPQ2M3C7 1700 aa13.82□□□□□ -0.2
SMPD4-209ENST00000439886 PTCH1Q13635 1447 aa13.82□□□□□ -0.2
SMPD4-209ENST00000439886 FAM177A1Q8N128 213 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-209ENST00000439886 SRGAP3O43295 1099 aa13.82□□□□□ -0.2
SMPD4-209ENST00000439886 GNAI3P08754 354 aa13.82□□□□□ -0.2
SMPD4-209ENST00000439886 ZKSCAN1P17029 563 aaPredicted RBP13.82□□□□□ -0.2
SMPD4-209ENST00000439886 IL13P35225 146 aa13.82□□□□□ -0.2
SMPD4-209ENST00000439886 CNTROBQ8N137 903 aa13.82□□□□□ -0.2
SMPD4-209ENST00000439886 GPATCH11Q8N954 259 aa13.82□□□□□ -0.2
SMPD4-209ENST00000439886 ZSCAN25Q6NSZ9 544 aa13.81□□□□□ -0.2
SMPD4-209ENST00000439886 CACTINQ8WUQ7 758 aaKnown RBP13.81□□□□□ -0.2
SMPD4-209ENST00000439886 ERCC4Q92889 916 aaPredicted RBP13.81□□□□□ -0.2
SMPD4-209ENST00000439886 CTNNA3Q9UI47 895 aa13.81□□□□□ -0.2
SMPD4-209ENST00000439886 TTC6Q86TZ1 520 aa13.81□□□□□ -0.2
SMPD4-209ENST00000439886 USP16Q9Y5T5 823 aa13.81□□□□□ -0.2
SMPD4-209ENST00000439886 MAP3K4Q9Y6R4 1608 aa13.81□□□□□ -0.2
SMPD4-209ENST00000439886 TCHHQ07283 1943 aa13.8□□□□□ -0.2
SMPD4-209ENST00000439886 ZNF853P0CG23 659 aa13.8□□□□□ -0.2
SMPD4-209ENST00000439886 SKILP12757 684 aa13.8□□□□□ -0.2
SMPD4-209ENST00000439886 CYB5RLQ6IPT4 315 aa13.8□□□□□ -0.2
SMPD4-209ENST00000439886 CCAR2Q8N163 923 aaKnown RBP13.8□□□□□ -0.2
SMPD4-209ENST00000439886 ANKRD7Q92527 254 aa13.8□□□□□ -0.2
SMPD4-209ENST00000439886 GNL2Q13823 731 aaKnown RBP13.8□□□□□ -0.2
SMPD4-209ENST00000439886 ADGRL1O94910 1474 aa13.8□□□□□ -0.2
SMPD4-209ENST00000439886 MED14O60244 1454 aa13.79□□□□□ -0.2
SMPD4-209ENST00000439886 HSPA4P34932 840 aa13.79□□□□□ -0.2
SMPD4-209ENST00000439886 CDC37L1Q7L3B6 337 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms