RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 TMPOP42166 694 aaKnown RBP23.29■■□□□ 1.32
CCDC188-201ENST00000439765 RIPK4P57078 832 aa23.29■■□□□ 1.32
CCDC188-201ENST00000439765 NEUROD2Q15784 382 aa23.29■■□□□ 1.32
CCDC188-201ENST00000439765 TRAPPC3LQ5T215 181 aa23.29■■□□□ 1.32
CCDC188-201ENST00000439765 ZNF790Q6PG37 636 aa23.29■■□□□ 1.32
CCDC188-201ENST00000439765 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
CCDC188-201ENST00000439765 BRCA1P38398 1863 aaKnown RBP23.28■■□□□ 1.32
CCDC188-201ENST00000439765 GRIN3BO60391 1043 aa23.27■■□□□ 1.32
CCDC188-201ENST00000439765 DNAJC10Q8IXB1 793 aa23.27■■□□□ 1.32
CCDC188-201ENST00000439765 ZNF496Q96IT1 587 aaPredicted RBP23.27■■□□□ 1.32
CCDC188-201ENST00000439765 LAMB4A4D0S4 1761 aa23.27■■□□□ 1.31
CCDC188-201ENST00000439765 KCNQ3O43525 872 aa23.26■■□□□ 1.31
CCDC188-201ENST00000439765 ARHGEF1Q92888 912 aaKnown RBP23.26■■□□□ 1.31
CCDC188-201ENST00000439765 N4BP2Q86UW6 1770 aaPredicted RBP23.26■■□□□ 1.31
CCDC188-201ENST00000439765 HEG1Q9ULI3 1381 aa23.25■■□□□ 1.31
CCDC188-201ENST00000439765 MMP10P09238 476 aa23.24■■□□□ 1.31
CCDC188-201ENST00000439765 CRKLP46109 303 aaKnown RBP23.24■■□□□ 1.31
CCDC188-201ENST00000439765 NLGN1Q8N2Q7 840 aa23.24■■□□□ 1.31
CCDC188-201ENST00000439765 RFC4P35249 363 aa23.23■■□□□ 1.31
CCDC188-201ENST00000439765 LMOD3Q0VAK6 560 aa23.23■■□□□ 1.31
CCDC188-201ENST00000439765 TAF7Q15545 349 aaPredicted RBP23.23■■□□□ 1.31
CCDC188-201ENST00000439765 PNISRQ8TF01 805 aaKnown RBP23.23■■□□□ 1.31
CCDC188-201ENST00000439765 MIS18AQ9NYP9 233 aa23.23■■□□□ 1.31
CCDC188-201ENST00000439765 GYS1P13807 737 aa23.22■■□□□ 1.31
CCDC188-201ENST00000439765 VSIG10Q8N0Z9 540 aa23.22■■□□□ 1.31
CCDC188-201ENST00000439765 FMNL2Q96PY5 1086 aa23.22■■□□□ 1.31
CCDC188-201ENST00000439765 C10orf71Q711Q0 1435 aa23.21■■□□□ 1.31
CCDC188-201ENST00000439765 APAF1O14727 1248 aa23.2■■□□□ 1.3
CCDC188-201ENST00000439765 CYP19A1P11511 503 aaPredicted RBP23.19■■□□□ 1.3
CCDC188-201ENST00000439765 TRIM35Q9UPQ4 493 aa23.19■■□□□ 1.3
CCDC188-201ENST00000439765 PXDNLA1KZ92 1463 aa23.19■■□□□ 1.3
CCDC188-201ENST00000439765 ARFGEF1Q9Y6D6 1849 aa23.18■■□□□ 1.3
CCDC188-201ENST00000439765 SENP3-EIF4A1A0A087X0R7 540 aa23.18■■□□□ 1.3
CCDC188-201ENST00000439765 INTS5Q6P9B9 1019 aaKnown RBP23.18■■□□□ 1.3
CCDC188-201ENST00000439765 CCDC87Q9NVE4 849 aa23.18■■□□□ 1.3
CCDC188-201ENST00000439765 USP42Q9H9J4 1324 aaKnown RBP23.18■■□□□ 1.3
CCDC188-201ENST00000439765 AFDNP55196 1824 aaKnown RBP23.18■■□□□ 1.3
CCDC188-201ENST00000439765 ZBTB1Q9Y2K1 713 aa23.17■■□□□ 1.3
CCDC188-201ENST00000439765 PRAMEF22A3QJZ6 481 aa23.16■■□□□ 1.3
CCDC188-201ENST00000439765 STARD3NLO95772 234 aa23.15■■□□□ 1.3
CCDC188-201ENST00000439765 SOS1Q07889 1333 aaPredicted RBP23.15■■□□□ 1.3
CCDC188-201ENST00000439765 SCN7AQ01118 1682 aa23.14■■□□□ 1.3
CCDC188-201ENST00000439765 TGFB2P61812 414 aa23.14■■□□□ 1.29
CCDC188-201ENST00000439765 TSPYL4Q9UJ04 414 aa23.14■■□□□ 1.29
CCDC188-201ENST00000439765 NRXN2Q9P2S2 1712 aa23.13■■□□□ 1.29
CCDC188-201ENST00000439765 COL15A1P39059 1388 aa23.13■■□□□ 1.29
CCDC188-201ENST00000439765 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
CCDC188-201ENST00000439765 SRP68Q9UHB9 627 aaKnown RBP23.13■■□□□ 1.29
CCDC188-201ENST00000439765 SNRPA1P09661 255 aaKnown RBP23.12■■□□□ 1.29
CCDC188-201ENST00000439765 CANXP27824 592 aaKnown RBP23.12■■□□□ 1.29
CCDC188-201ENST00000439765 TEX13AQ9BXU3 409 aaPredicted RBP23.12■■□□□ 1.29
CCDC188-201ENST00000439765 PARP3Q9Y6F1 533 aa23.12■■□□□ 1.29
CCDC188-201ENST00000439765 FKBP8Q14318 412 aa23.11■■□□□ 1.29
CCDC188-201ENST00000439765 LAS1LQ9Y4W2 734 aaKnown RBP23.11■■□□□ 1.29
CCDC188-201ENST00000439765 BCORQ6W2J9 1755 aa23.11■■□□□ 1.29
CCDC188-201ENST00000439765 ADCY9O60503 1353 aa23.11■■□□□ 1.29
CCDC188-201ENST00000439765 EIF4A1P60842 406 aaKnown RBP23.11■■□□□ 1.29
CCDC188-201ENST00000439765 USP16Q9Y5T5 823 aa23.11■■□□□ 1.29
CCDC188-201ENST00000439765 ZNF330Q9Y3S2 320 aaPredicted RBP23.1■■□□□ 1.29
CCDC188-201ENST00000439765 DLEC1Q9Y238 1755 aa23.09■■□□□ 1.29
CCDC188-201ENST00000439765 PIP4K2AP48426 406 aaPredicted RBP23.09■■□□□ 1.29
CCDC188-201ENST00000439765 DDR1Q08345 913 aa23.09■■□□□ 1.29
CCDC188-201ENST00000439765 WWC3Q9ULE0 1092 aa23.09■■□□□ 1.29
CCDC188-201ENST00000439765 A1BGP04217 495 aa23.08■■□□□ 1.29
CCDC188-201ENST00000439765 ATP10DQ9P241 1426 aa23.08■■□□□ 1.29
CCDC188-201ENST00000439765 ZPR1O75312 459 aa23.07■■□□□ 1.28
CCDC188-201ENST00000439765 USPL1Q5W0Q7 1092 aa23.07■■□□□ 1.28
CCDC188-201ENST00000439765 NARFQ9UHQ1 456 aa23.07■■□□□ 1.28
CCDC188-201ENST00000439765 GIGYF1O75420 1035 aaPredicted RBP23.06■■□□□ 1.28
CCDC188-201ENST00000439765 TM4SF1P30408 202 aa23.06■■□□□ 1.28
CCDC188-201ENST00000439765 BABAM1Q9NWV8 329 aa23.06■■□□□ 1.28
CCDC188-201ENST00000439765 A0A0G2JLW4 131 aa23.05■■□□□ 1.28
CCDC188-201ENST00000439765 POLRMTO00411 1230 aaKnown RBP23.05■■□□□ 1.28
CCDC188-201ENST00000439765 DPEP1P16444 411 aa23.05■■□□□ 1.28
CCDC188-201ENST00000439765 CHL1O00533 1208 aa23.04■■□□□ 1.28
CCDC188-201ENST00000439765 EIF5P55010 431 aaKnown RBP23.04■■□□□ 1.28
CCDC188-201ENST00000439765 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
CCDC188-201ENST00000439765 SBF1O95248 1867 aa23.04■■□□□ 1.28
CCDC188-201ENST00000439765 IL6STP40189 918 aaPredicted RBP23.03■■□□□ 1.28
CCDC188-201ENST00000439765 C1QTNF8P60827 252 aa23.03■■□□□ 1.28
CCDC188-201ENST00000439765 CFAP44Q96MT7 982 aa23.03■■□□□ 1.28
CCDC188-201ENST00000439765 KCNA3P22001 575 aa23.02■■□□□ 1.28
CCDC188-201ENST00000439765 CALD1Q05682 793 aaKnown RBP23.02■■□□□ 1.28
CCDC188-201ENST00000439765 KRT24Q2M2I5 525 aa23.02■■□□□ 1.28
CCDC188-201ENST00000439765 BCL2L12Q9HB09 334 aa23.02■■□□□ 1.28
CCDC188-201ENST00000439765 MBIPQ9NS73 344 aa23.02■■□□□ 1.28
CCDC188-201ENST00000439765 BCS1LQ9Y276 419 aa23.02■■□□□ 1.28
CCDC188-201ENST00000439765 ANKRD31Q8N7Z5 1873 aa23.01■■□□□ 1.27
CCDC188-201ENST00000439765 NBPF26B4DH59 902 aa23.01■■□□□ 1.27
CCDC188-201ENST00000439765 NBPF10Q6P3W6 841 aaKnown RBP23.01■■□□□ 1.27
CCDC188-201ENST00000439765 NBPF15Q8N660 670 aa23.01■■□□□ 1.27
CCDC188-201ENST00000439765 IFT57Q9NWB7 429 aa23.01■■□□□ 1.27
CCDC188-201ENST00000439765 NFIXQ14938 502 aa23■■□□□ 1.27
CCDC188-201ENST00000439765 CCDC27Q2M243 656 aa23■■□□□ 1.27
CCDC188-201ENST00000439765 NPM2Q86SE8 214 aaKnown RBP23■■□□□ 1.27
CCDC188-201ENST00000439765 WWC1Q8IX03 1113 aa23■■□□□ 1.27
CCDC188-201ENST00000439765 A0A087WZG4 1122 aa22.99■■□□□ 1.27
CCDC188-201ENST00000439765 TBC1D2BQ9UPU7 963 aa22.99■■□□□ 1.27
CCDC188-201ENST00000439765 ZNF853P0CG23 659 aa22.98■■□□□ 1.27
CCDC188-201ENST00000439765 GNAI1P63096 354 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms