RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 CCDC30Q5VVM6 783 aa12.78□□□□□ -0.36
CBX5-202ENST00000439541 KRT27Q7Z3Y8 459 aa12.78□□□□□ -0.36
CBX5-202ENST00000439541 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
CBX5-202ENST00000439541 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
CBX5-202ENST00000439541 USP16Q9Y5T5 823 aa12.78□□□□□ -0.36
CBX5-202ENST00000439541 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
CBX5-202ENST00000439541 SOS1Q07889 1333 aaPredicted RBP12.78□□□□□ -0.36
CBX5-202ENST00000439541 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
CBX5-202ENST00000439541 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
CBX5-202ENST00000439541 SLC4A9Q96Q91 983 aa12.78□□□□□ -0.36
CBX5-202ENST00000439541 RBM42Q9BTD8 480 aaKnown RBP12.78□□□□□ -0.36
CBX5-202ENST00000439541 STK31Q9BXU1 1019 aa12.78□□□□□ -0.36
CBX5-202ENST00000439541 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
CBX5-202ENST00000439541 EXOC6Q8TAG9 804 aa12.77□□□□□ -0.37
CBX5-202ENST00000439541 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
CBX5-202ENST00000439541 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
CBX5-202ENST00000439541 PHAXQ9H814 394 aaKnown RBP12.76□□□□□ -0.37
CBX5-202ENST00000439541 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
CBX5-202ENST00000439541 PDIA6Q15084 440 aa12.75□□□□□ -0.37
CBX5-202ENST00000439541 FTSJ3Q8IY81 847 aaKnown RBP12.75□□□□□ -0.37
CBX5-202ENST00000439541 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
CBX5-202ENST00000439541 MYL6BP14649 208 aa12.74□□□□□ -0.37
CBX5-202ENST00000439541 FLIIQ13045 1269 aa12.74□□□□□ -0.37
CBX5-202ENST00000439541 F6X3S4 739 aa12.74□□□□□ -0.37
CBX5-202ENST00000439541 A1BGP04217 495 aa12.74□□□□□ -0.37
CBX5-202ENST00000439541 KCNQ4P56696 695 aa12.74□□□□□ -0.37
CBX5-202ENST00000439541 DZIP1LQ8IYY4 767 aaKnown RBP12.74□□□□□ -0.37
CBX5-202ENST00000439541 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
CBX5-202ENST00000439541 ABCC4O15439 1325 aa12.73□□□□□ -0.37
CBX5-202ENST00000439541 FKBP5Q13451 457 aaPredicted RBP12.73□□□□□ -0.37
CBX5-202ENST00000439541 PDE3AQ14432 1141 aa12.73□□□□□ -0.37
CBX5-202ENST00000439541 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
CBX5-202ENST00000439541 CICQ96RK0 1608 aaPredicted RBP12.72□□□□□ -0.37
CBX5-202ENST00000439541 LOC102724428A0A0B4J2F2 783 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
CBX5-202ENST00000439541 TRIM37O94972 964 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 SIK1P57059 783 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 ITPK1Q13572 414 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 NBPF10Q6P3W6 841 aaKnown RBP12.72□□□□□ -0.37
CBX5-202ENST00000439541 FAM196AQ6ZSG2 479 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 NBPF15Q8N660 670 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
CBX5-202ENST00000439541 PTPRCP08575 1304 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 LRP10Q7Z4F1 713 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 VSIG10Q8N0Z9 540 aa12.72□□□□□ -0.37
CBX5-202ENST00000439541 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.38
CBX5-202ENST00000439541 ATP6V1AP38606 617 aa12.71□□□□□ -0.38
CBX5-202ENST00000439541 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.38
CBX5-202ENST00000439541 ARHGAP45Q92619 1136 aa12.71□□□□□ -0.38
CBX5-202ENST00000439541 API5Q9BZZ5 524 aaKnown RBP12.71□□□□□ -0.38
CBX5-202ENST00000439541 ADCY9O60503 1353 aa12.7□□□□□ -0.38
CBX5-202ENST00000439541 MVPQ14764 893 aaKnown RBP12.7□□□□□ -0.38
CBX5-202ENST00000439541 SLC4A10Q6U841 1118 aa12.7□□□□□ -0.38
CBX5-202ENST00000439541 XAGE3Q8WTP9 111 aa12.7□□□□□ -0.38
CBX5-202ENST00000439541 SMARCC1Q92922 1105 aaPredicted RBP12.7□□□□□ -0.38
CBX5-202ENST00000439541 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
CBX5-202ENST00000439541 LY75O60449 1722 aa12.7□□□□□ -0.38
CBX5-202ENST00000439541 CYP19A1P11511 503 aaPredicted RBP12.69□□□□□ -0.38
CBX5-202ENST00000439541 ERICH6Q7L0X2 663 aa12.69□□□□□ -0.38
CBX5-202ENST00000439541 HYPKQ9NX55 129 aa12.69□□□□□ -0.38
CBX5-202ENST00000439541 ZBTB1Q9Y2K1 713 aa12.69□□□□□ -0.38
CBX5-202ENST00000439541 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
CBX5-202ENST00000439541 TNS1Q9HBL0 1735 aaKnown RBP12.69□□□□□ -0.38
CBX5-202ENST00000439541 LINC00116Q8NCU8 138 aa12.69□□□□□ -0.38
CBX5-202ENST00000439541 CACNA1FO60840 1977 aa12.69□□□□□ -0.38
CBX5-202ENST00000439541 N4BP2Q86UW6 1770 aaPredicted RBP12.69□□□□□ -0.38
CBX5-202ENST00000439541 ZNF831Q5JPB2 1677 aa12.68□□□□□ -0.38
CBX5-202ENST00000439541 RREB1Q92766 1687 aa12.68□□□□□ -0.38
CBX5-202ENST00000439541 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
CBX5-202ENST00000439541 COPS6Q7L5N1 327 aa12.68□□□□□ -0.38
CBX5-202ENST00000439541 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
CBX5-202ENST00000439541 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
CBX5-202ENST00000439541 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
CBX5-202ENST00000439541 PXDNLA1KZ92 1463 aa12.68□□□□□ -0.38
CBX5-202ENST00000439541 STARD3NLO95772 234 aa12.67□□□□□ -0.38
CBX5-202ENST00000439541 B4GALNT3Q6L9W6 998 aa12.67□□□□□ -0.38
CBX5-202ENST00000439541 TTLL7Q6ZT98 887 aa12.67□□□□□ -0.38
CBX5-202ENST00000439541 ARFGEF2Q9Y6D5 1785 aa12.67□□□□□ -0.38
CBX5-202ENST00000439541 NUP188Q5SRE5 1749 aa12.67□□□□□ -0.38
CBX5-202ENST00000439541 MS4A1P11836 297 aa12.67□□□□□ -0.38
CBX5-202ENST00000439541 CRKLP46109 303 aaKnown RBP12.67□□□□□ -0.38
CBX5-202ENST00000439541 TEX13AQ9BXU3 409 aaPredicted RBP12.67□□□□□ -0.38
CBX5-202ENST00000439541 CCNL1Q9UK58 526 aaPredicted RBP12.67□□□□□ -0.38
CBX5-202ENST00000439541 MAP3K2Q9Y2U5 619 aa12.67□□□□□ -0.38
CBX5-202ENST00000439541 MYH14Q7Z406 1995 aaKnown RBP12.66□□□□□ -0.38
CBX5-202ENST00000439541 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
CBX5-202ENST00000439541 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.38
CBX5-202ENST00000439541 SMIM5Q71RC9 77 aa12.65□□□□□ -0.38
CBX5-202ENST00000439541 DNAAF4Q8WXU2 420 aa12.65□□□□□ -0.38
CBX5-202ENST00000439541 ZBTB3Q9H5J0 574 aa12.65□□□□□ -0.38
CBX5-202ENST00000439541 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
CBX5-202ENST00000439541 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
CBX5-202ENST00000439541 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.38
CBX5-202ENST00000439541 MSH5O43196 834 aa12.65□□□□□ -0.39
CBX5-202ENST00000439541 KSR2Q6VAB6 950 aa12.65□□□□□ -0.39
CBX5-202ENST00000439541 LRRC4BQ9NT99 713 aa12.65□□□□□ -0.39
CBX5-202ENST00000439541 DDX19BQ9UMR2 479 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms