RNA–Protein interactions for RNA: ENST00000439424.6

C17orf49-201, Transcript of chromosome 17 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C17orf49, Length 850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C17orf49-201ENST00000439424 MMP10P09238 476 aa31.9■■■□□ 2.7
C17orf49-201ENST00000439424 USP42Q9H9J4 1324 aaKnown RBP31.89■■■□□ 2.7
C17orf49-201ENST00000439424 COL15A1P39059 1388 aa31.89■■■□□ 2.7
C17orf49-201ENST00000439424 N4BP2Q86UW6 1770 aaPredicted RBP31.89■■■□□ 2.69
C17orf49-201ENST00000439424 FMNL2Q96PY5 1086 aa31.88■■■□□ 2.69
C17orf49-201ENST00000439424 AFDNP55196 1824 aaKnown RBP31.86■■■□□ 2.69
C17orf49-201ENST00000439424 PNNQ9H307 717 aaKnown RBP31.86■■■□□ 2.69
C17orf49-201ENST00000439424 NLGN1Q8N2Q7 840 aa31.85■■■□□ 2.69
C17orf49-201ENST00000439424 THUMPD2Q9BTF0 503 aaKnown RBP31.85■■■□□ 2.69
C17orf49-201ENST00000439424 CD2APQ9Y5K6 639 aa31.85■■■□□ 2.69
C17orf49-201ENST00000439424 BCORQ6W2J9 1755 aa31.85■■■□□ 2.69
C17orf49-201ENST00000439424 ZNF316A6NFI3 1004 aaPredicted RBP31.83■■■□□ 2.69
C17orf49-201ENST00000439424 STARD3NLO95772 234 aa31.82■■■□□ 2.68
C17orf49-201ENST00000439424 CANXP27824 592 aaKnown RBP31.82■■■□□ 2.68
C17orf49-201ENST00000439424 FKBP8Q14318 412 aa31.82■■■□□ 2.68
C17orf49-201ENST00000439424 BRCA1P38398 1863 aaKnown RBP31.82■■■□□ 2.68
C17orf49-201ENST00000439424 C10orf71Q711Q0 1435 aa31.82■■■□□ 2.68
C17orf49-201ENST00000439424 CCDC146Q8IYE0 955 aa31.81■■■□□ 2.68
C17orf49-201ENST00000439424 PRAMEF22A3QJZ6 481 aa31.8■■■□□ 2.68
C17orf49-201ENST00000439424 TAF7Q15545 349 aaPredicted RBP31.8■■■□□ 2.68
C17orf49-201ENST00000439424 PELP1Q8IZL8 1130 aaKnown RBP31.8■■■□□ 2.68
C17orf49-201ENST00000439424 MIS18AQ9NYP9 233 aa31.8■■■□□ 2.68
C17orf49-201ENST00000439424 WDR43Q15061 677 aaKnown RBP eCLIP31.79■■■□□ 2.68
C17orf49-201ENST00000439424 GPR162Q16538 588 aa31.79■■■□□ 2.68
C17orf49-201ENST00000439424 USPL1Q5W0Q7 1092 aa31.79■■■□□ 2.68
C17orf49-201ENST00000439424 TEX13AQ9BXU3 409 aaPredicted RBP31.79■■■□□ 2.68
C17orf49-201ENST00000439424 NRXN2Q9P2S2 1712 aa31.79■■■□□ 2.68
C17orf49-201ENST00000439424 PXDNLA1KZ92 1463 aa31.77■■■□□ 2.68
C17orf49-201ENST00000439424 ZPR1O75312 459 aa31.76■■■□□ 2.67
C17orf49-201ENST00000439424 TMPOP42166 694 aaKnown RBP31.76■■■□□ 2.67
C17orf49-201ENST00000439424 EIF5P55010 431 aaKnown RBP31.76■■■□□ 2.67
C17orf49-201ENST00000439424 DDR1Q08345 913 aa31.76■■■□□ 2.67
C17orf49-201ENST00000439424 NARFQ9UHQ1 456 aa31.76■■■□□ 2.67
C17orf49-201ENST00000439424 A1BGP04217 495 aa31.75■■■□□ 2.67
C17orf49-201ENST00000439424 YBX3P16989 372 aaKnown RBP eCLIP31.75■■■□□ 2.673e-7■■■■□ 20.4
C17orf49-201ENST00000439424 RIPK4P57078 832 aa31.75■■■□□ 2.67
C17orf49-201ENST00000439424 ADAMTS8Q9UP79 889 aa31.75■■■□□ 2.67
C17orf49-201ENST00000439424 RRP7AQ9Y3A4 280 aaKnown RBP31.75■■■□□ 2.67
C17orf49-201ENST00000439424 USP16Q9Y5T5 823 aa31.75■■■□□ 2.67
C17orf49-201ENST00000439424 PARP3Q9Y6F1 533 aa31.75■■■□□ 2.67
C17orf49-201ENST00000439424 BCL2L12Q9HB09 334 aa31.74■■■□□ 2.67
C17orf49-201ENST00000439424 YY1P25490 414 aa31.73■■■□□ 2.67
C17orf49-201ENST00000439424 ZNF330Q9Y3S2 320 aaPredicted RBP31.73■■■□□ 2.67
C17orf49-201ENST00000439424 SNRPA1P09661 255 aaKnown RBP31.72■■■□□ 2.67
C17orf49-201ENST00000439424 PIP4K2AP48426 406 aaPredicted RBP31.72■■■□□ 2.67
C17orf49-201ENST00000439424 RUNDC1Q96C34 613 aa31.71■■■□□ 2.67
C17orf49-201ENST00000439424 WWC3Q9ULE0 1092 aa31.71■■■□□ 2.67
C17orf49-201ENST00000439424 IL6STP40189 918 aaPredicted RBP31.7■■■□□ 2.67
C17orf49-201ENST00000439424 PNISRQ8TF01 805 aaKnown RBP31.7■■■□□ 2.67
C17orf49-201ENST00000439424 POLRMTO00411 1230 aaKnown RBP31.69■■■□□ 2.66
C17orf49-201ENST00000439424 TM4SF1P30408 202 aa31.69■■■□□ 2.66
C17orf49-201ENST00000439424 NEUROD2Q15784 382 aa31.68■■■□□ 2.66
C17orf49-201ENST00000439424 CCDC184Q52MB2 194 aa31.68■■■□□ 2.66
C17orf49-201ENST00000439424 ANKRD31Q8N7Z5 1873 aa31.67■■■□□ 2.66
C17orf49-201ENST00000439424 DLEC1Q9Y238 1755 aa31.67■■■□□ 2.66
C17orf49-201ENST00000439424 NFIXQ14938 502 aa31.67■■■□□ 2.66
C17orf49-201ENST00000439424 A0A087WZG4 1122 aa31.66■■■□□ 2.66
C17orf49-201ENST00000439424 LMOD3Q0VAK6 560 aa31.66■■■□□ 2.66
C17orf49-201ENST00000439424 TBC1D2BQ9UPU7 963 aa31.66■■■□□ 2.66
C17orf49-201ENST00000439424 ARFGEF1Q9Y6D6 1849 aa31.65■■■□□ 2.66
C17orf49-201ENST00000439424 EIF4A1P60842 406 aaKnown RBP31.65■■■□□ 2.66
C17orf49-201ENST00000439424 NBPF26B4DH59 902 aa31.63■■■□□ 2.65
C17orf49-201ENST00000439424 NBPF10Q6P3W6 841 aaKnown RBP31.63■■■□□ 2.65
C17orf49-201ENST00000439424 NBPF15Q8N660 670 aa31.63■■■□□ 2.65
C17orf49-201ENST00000439424 TRIM35Q9UPQ4 493 aa31.63■■■□□ 2.65
C17orf49-201ENST00000439424 GIGYF1O75420 1035 aaPredicted RBP31.62■■■□□ 2.65
C17orf49-201ENST00000439424 TSPYL4Q9UJ04 414 aa31.62■■■□□ 2.65
C17orf49-201ENST00000439424 A0A0G2JLW4 131 aa31.61■■■□□ 2.65
C17orf49-201ENST00000439424 TGFB2P61812 414 aa31.61■■■□□ 2.65
C17orf49-201ENST00000439424 NUP98P52948 1817 aa31.61■■■□□ 2.65
C17orf49-201ENST00000439424 CAMTA2O94983 1202 aa31.6■■■□□ 2.65
C17orf49-201ENST00000439424 BICDL1Q6ZP65 573 aa31.6■■■□□ 2.65
C17orf49-201ENST00000439424 DZIP3Q86Y13 1208 aaKnown RBP31.6■■■□□ 2.65
C17orf49-201ENST00000439424 COL11A2P13942 1736 aaPredicted RBP31.59■■■□□ 2.65
C17orf49-201ENST00000439424 DPEP1P16444 411 aa31.59■■■□□ 2.65
C17orf49-201ENST00000439424 TBC1D9BQ66K14 1250 aa31.59■■■□□ 2.65
C17orf49-201ENST00000439424 CARMIL3Q8ND23 1372 aa31.58■■■□□ 2.65
C17orf49-201ENST00000439424 GRIN3BO60391 1043 aa31.58■■■□□ 2.65
C17orf49-201ENST00000439424 NPM2Q86SE8 214 aaKnown RBP31.57■■■□□ 2.64
C17orf49-201ENST00000439424 SERPINB2P05120 415 aa31.56■■■□□ 2.64
C17orf49-201ENST00000439424 CACNA1SQ13698 1873 aa31.55■■■□□ 2.64
C17orf49-201ENST00000439424 ANP32CO43423 234 aa31.54■■■□□ 2.64
C17orf49-201ENST00000439424 KCNA3P22001 575 aa31.54■■■□□ 2.64
C17orf49-201ENST00000439424 APAF1O14727 1248 aa31.53■■■□□ 2.64
C17orf49-201ENST00000439424 BABAM1Q9NWV8 329 aa31.53■■■□□ 2.64
C17orf49-201ENST00000439424 CHRNA5P30532 468 aa31.52■■■□□ 2.64
C17orf49-201ENST00000439424 BCS1LQ9Y276 419 aa31.5■■■□□ 2.63
C17orf49-201ENST00000439424 LAS1LQ9Y4W2 734 aaKnown RBP31.5■■■□□ 2.63
C17orf49-201ENST00000439424 CHL1O00533 1208 aa31.49■■■□□ 2.63
C17orf49-201ENST00000439424 KRT24Q2M2I5 525 aa31.48■■■□□ 2.63
C17orf49-201ENST00000439424 NGEFQ8N5V2 710 aa31.48■■■□□ 2.63
C17orf49-201ENST00000439424 MRS2Q9HD23 443 aa31.48■■■□□ 2.63
C17orf49-201ENST00000439424 ANKRD36CQ5JPF3 1778 aa31.47■■■□□ 2.63
C17orf49-201ENST00000439424 MYL6BP14649 208 aa31.46■■■□□ 2.63
C17orf49-201ENST00000439424 PRR5LQ6MZQ0 368 aa31.46■■■□□ 2.63
C17orf49-201ENST00000439424 CCDC24Q8N4L8 307 aa31.46■■■□□ 2.63
C17orf49-201ENST00000439424 ZNF784Q8NCA9 323 aaPredicted RBP31.46■■■□□ 2.63
C17orf49-201ENST00000439424 SETDB2Q96T68 719 aa31.45■■■□□ 2.63
C17orf49-201ENST00000439424 ARFGEF2Q9Y6D5 1785 aa31.45■■■□□ 2.62
C17orf49-201ENST00000439424 HLFQ16534 295 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms