RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 GYS1P13807 737 aa15.71■□□□□ 0.11
CSTF3-203ENST00000438862 RC3H1Q5TC82 1133 aaKnown RBP15.71■□□□□ 0.11
CSTF3-203ENST00000438862 ARHGEF1Q92888 912 aaKnown RBP15.71■□□□□ 0.11
CSTF3-203ENST00000438862 SPG7Q9UQ90 795 aa15.71■□□□□ 0.11
CSTF3-203ENST00000438862 RFC4P35249 363 aa15.7■□□□□ 0.1
CSTF3-203ENST00000438862 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
CSTF3-203ENST00000438862 RASEFQ8IZ41 740 aa15.7■□□□□ 0.1
CSTF3-203ENST00000438862 MIER1Q8N108 512 aa15.7■□□□□ 0.1
CSTF3-203ENST00000438862 GLTPD2A6NH11 291 aa15.69■□□□□ 0.1
CSTF3-203ENST00000438862 KIF24Q5T7B8 1368 aa15.69■□□□□ 0.1
CSTF3-203ENST00000438862 SLC39A7Q92504 469 aa15.68■□□□□ 0.1
CSTF3-203ENST00000438862 CARD11Q9BXL7 1154 aa15.68■□□□□ 0.1
CSTF3-203ENST00000438862 PRDM10Q9NQV6 1147 aa15.68■□□□□ 0.1
CSTF3-203ENST00000438862 ATG3Q9NT62 314 aa15.68■□□□□ 0.1
CSTF3-203ENST00000438862 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.68■□□□□ 0.12e-12■■□□□ 14.3
CSTF3-203ENST00000438862 TRPC6Q9Y210 931 aa15.68■□□□□ 0.1
CSTF3-203ENST00000438862 FLT4P35916 1363 aa15.67■□□□□ 0.1
CSTF3-203ENST00000438862 RPS6KA4O75676 772 aa15.67■□□□□ 0.1
CSTF3-203ENST00000438862 ATN1P54259 1190 aaPredicted RBP15.67■□□□□ 0.1
CSTF3-203ENST00000438862 FYB1O15117 783 aa15.66■□□□□ 0.1
CSTF3-203ENST00000438862 SLC24A1O60721 1099 aa15.66■□□□□ 0.1
CSTF3-203ENST00000438862 C7P10643 843 aa15.66■□□□□ 0.1
CSTF3-203ENST00000438862 ZNF831Q5JPB2 1677 aa15.65■□□□□ 0.1
CSTF3-203ENST00000438862 LMNB1P20700 586 aa15.65■□□□□ 0.1
CSTF3-203ENST00000438862 IFNL2Q8IZJ0 200 aa15.65■□□□□ 0.1
CSTF3-203ENST00000438862 CNTNAP4Q9C0A0 1308 aa15.65■□□□□ 0.1
CSTF3-203ENST00000438862 KDM6AO15550 1401 aaPredicted RBP15.64■□□□□ 0.09
CSTF3-203ENST00000438862 GGNBP2Q9H3C7 697 aa15.64■□□□□ 0.09
CSTF3-203ENST00000438862 MAP3K13O43283 966 aa15.63■□□□□ 0.09
CSTF3-203ENST00000438862 CHRNA5P30532 468 aa15.63■□□□□ 0.09
CSTF3-203ENST00000438862 SIN3AQ96ST3 1273 aa15.63■□□□□ 0.09
CSTF3-203ENST00000438862 KDRP35968 1356 aa15.62■□□□□ 0.09
CSTF3-203ENST00000438862 FOXN1O15353 648 aa15.62■□□□□ 0.09
CSTF3-203ENST00000438862 PHKG2P15735 406 aa15.62■□□□□ 0.09
CSTF3-203ENST00000438862 DPY19L2Q6NUT2 758 aa15.62■□□□□ 0.09
CSTF3-203ENST00000438862 SLC4A9Q96Q91 983 aa15.62■□□□□ 0.09
CSTF3-203ENST00000438862 BMP2KQ9NSY1 1161 aaPredicted RBP15.62■□□□□ 0.09
CSTF3-203ENST00000438862 TONSLQ96HA7 1378 aa15.62■□□□□ 0.09
CSTF3-203ENST00000438862 NCAPD2Q15021 1401 aa15.61■□□□□ 0.09
CSTF3-203ENST00000438862 CTCFP49711 727 aaPredicted RBP15.61■□□□□ 0.09
CSTF3-203ENST00000438862 NEUROD1Q13562 356 aa15.61■□□□□ 0.09
CSTF3-203ENST00000438862 COL5A3P25940 1745 aaPredicted RBP15.6■□□□□ 0.09
CSTF3-203ENST00000438862 ERVV-2B6SEH9 535 aa15.6■□□□□ 0.09
CSTF3-203ENST00000438862 RASSF7Q02833 373 aa15.6■□□□□ 0.09
CSTF3-203ENST00000438862 TRIM26Q12899 539 aaPredicted RBP15.6■□□□□ 0.09
CSTF3-203ENST00000438862 AIDAQ96BJ3 306 aa15.6■□□□□ 0.09
CSTF3-203ENST00000438862 MKRN1Q9UHC7 482 aaKnown RBP15.6■□□□□ 0.09
CSTF3-203ENST00000438862 POTECB2RU33 542 aa15.59■□□□□ 0.09
CSTF3-203ENST00000438862 DDR1Q08345 913 aa15.59■□□□□ 0.09
CSTF3-203ENST00000438862 FKBP8Q14318 412 aa15.59■□□□□ 0.09
CSTF3-203ENST00000438862 POTEFA5A3E0 1075 aa15.58■□□□□ 0.08
CSTF3-203ENST00000438862 TM4SF1P30408 202 aa15.58■□□□□ 0.08
CSTF3-203ENST00000438862 USP42Q9H9J4 1324 aaKnown RBP15.58■□□□□ 0.08
CSTF3-203ENST00000438862 MYH14Q7Z406 1995 aaKnown RBP15.58■□□□□ 0.08
CSTF3-203ENST00000438862 CCDC88AQ3V6T2 1871 aa15.57■□□□□ 0.08
CSTF3-203ENST00000438862 FAM161AQ3B820 660 aa15.57■□□□□ 0.08
CSTF3-203ENST00000438862 TESK2Q96S53 571 aa15.57■□□□□ 0.08
CSTF3-203ENST00000438862 POLRMTO00411 1230 aaKnown RBP15.56■□□□□ 0.08
CSTF3-203ENST00000438862 HSP90AB1P08238 724 aaKnown RBP15.56■□□□□ 0.08
CSTF3-203ENST00000438862 SRP68Q9UHB9 627 aaKnown RBP15.56■□□□□ 0.08
CSTF3-203ENST00000438862 CNTNAP1P78357 1384 aa15.56■□□□□ 0.08
CSTF3-203ENST00000438862 TTLL6Q8N841 843 aa15.55■□□□□ 0.08
CSTF3-203ENST00000438862 ABHD8Q96I13 439 aa15.55■□□□□ 0.08
CSTF3-203ENST00000438862 EYA1Q99502 592 aa15.55■□□□□ 0.08
CSTF3-203ENST00000438862 EMILIN1Q9Y6C2 1016 aa15.55■□□□□ 0.08
CSTF3-203ENST00000438862 TIAM2Q8IVF5 1701 aa15.54■□□□□ 0.08
CSTF3-203ENST00000438862 WASHC2AQ641Q2 1341 aa15.54■□□□□ 0.08
CSTF3-203ENST00000438862 CRKLP46109 303 aaKnown RBP15.54■□□□□ 0.08
CSTF3-203ENST00000438862 PPM1GO15355 546 aaPredicted RBP15.53■□□□□ 0.08
CSTF3-203ENST00000438862 ZPR1O75312 459 aa15.53■□□□□ 0.08
CSTF3-203ENST00000438862 LBX1P52954 281 aa15.53■□□□□ 0.08
CSTF3-203ENST00000438862 MLLT1Q03111 559 aaPredicted RBP15.53■□□□□ 0.08
CSTF3-203ENST00000438862 PLCD3Q8N3E9 789 aa15.53■□□□□ 0.08
CSTF3-203ENST00000438862 WBP1LQ9NX94 342 aa15.53■□□□□ 0.08
CSTF3-203ENST00000438862 KIF20BQ96Q89 1820 aa15.52■□□□□ 0.08
CSTF3-203ENST00000438862 ST20-MTHFSA0A0A6YYL1 179 aa15.52■□□□□ 0.08
CSTF3-203ENST00000438862 TIE1P35590 1138 aa15.52■□□□□ 0.08
CSTF3-203ENST00000438862 CABP4P57796 275 aa15.52■□□□□ 0.08
CSTF3-203ENST00000438862 NFKBIEO00221 500 aa15.51■□□□□ 0.07
CSTF3-203ENST00000438862 VEGFBP49765 207 aa15.51■□□□□ 0.07
CSTF3-203ENST00000438862 RGS19P49795 217 aa15.51■□□□□ 0.07
CSTF3-203ENST00000438862 NUBP1P53384 320 aa15.51■□□□□ 0.07
CSTF3-203ENST00000438862 PASKQ96RG2 1323 aa15.5■□□□□ 0.07
CSTF3-203ENST00000438862 DLEC1Q9Y238 1755 aa15.5■□□□□ 0.07
CSTF3-203ENST00000438862 H0YIN7 160 aa15.5■□□□□ 0.07
CSTF3-203ENST00000438862 PTCD1O75127 700 aaKnown RBP15.5■□□□□ 0.07
CSTF3-203ENST00000438862 ERFEQ4G0M1 354 aa15.5■□□□□ 0.07
CSTF3-203ENST00000438862 DICER1Q9UPY3 1922 aaKnown RBP15.5■□□□□ 0.07
CSTF3-203ENST00000438862 POTEMA6NI47 508 aa15.49■□□□□ 0.07
CSTF3-203ENST00000438862 TMEM88BA6NKF7 163 aa15.49■□□□□ 0.07
CSTF3-203ENST00000438862 USPL1Q5W0Q7 1092 aa15.49■□□□□ 0.07
CSTF3-203ENST00000438862 PLSCR2Q9NRY7 297 aa15.49■□□□□ 0.07
CSTF3-203ENST00000438862 AFDNP55196 1824 aaKnown RBP15.49■□□□□ 0.07
CSTF3-203ENST00000438862 VIRMAQ69YN4 1812 aaKnown RBP15.48■□□□□ 0.07
CSTF3-203ENST00000438862 INTS5Q6P9B9 1019 aaKnown RBP15.48■□□□□ 0.07
CSTF3-203ENST00000438862 C2CD5Q86YS7 1000 aa15.48■□□□□ 0.07
CSTF3-203ENST00000438862 IQCA1LA6NCM1 817 aa15.47■□□□□ 0.07
CSTF3-203ENST00000438862 SERPINB2P05120 415 aa15.47■□□□□ 0.07
CSTF3-203ENST00000438862 MAP2K1Q02750 393 aaPredicted RBP15.47■□□□□ 0.07
CSTF3-203ENST00000438862 NFIXQ14938 502 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms