RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 ATAD2Q6PL18 1390 aa9.16□□□□□ -0.94
SPEN-202ENST00000438066 ERVH48-1M5A8F1 160 aa9.15□□□□□ -0.94
SPEN-202ENST00000438066 SCAMP3O14828 347 aaKnown RBP9.15□□□□□ -0.94
SPEN-202ENST00000438066 MAPK8P45983 427 aa9.15□□□□□ -0.94
SPEN-202ENST00000438066 SCNN1DP51172 638 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 GDF10P55107 478 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 ZNF516Q92618 1163 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 SERTAD1Q9UHV2 236 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 GRIN2AQ12879 1464 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 LRRIQ1Q96JM4 1722 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 CASKIN1Q8WXD9 1431 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 S1PR4O95977 384 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 CDK11BP21127 795 aaKnown RBP9.14□□□□□ -0.95
SPEN-202ENST00000438066 XPCQ01831 940 aaPredicted RBP9.14□□□□□ -0.95
SPEN-202ENST00000438066 FMR1Q06787 632 aaKnown RBP eCLIP9.14□□□□□ -0.95
SPEN-202ENST00000438066 SF3A1Q15459 793 aaKnown RBP9.14□□□□□ -0.95
SPEN-202ENST00000438066 INTS6LQ5JSJ4 861 aaKnown RBP9.14□□□□□ -0.95
SPEN-202ENST00000438066 C16orf46Q6P387 395 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 UBXN4Q92575 508 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 CCDC87Q9NVE4 849 aa9.14□□□□□ -0.95
SPEN-202ENST00000438066 CDK11AQ9UQ88 783 aaPredicted RBP9.14□□□□□ -0.95
SPEN-202ENST00000438066 UGGT2Q9NYU1 1516 aa9.13□□□□□ -0.95
SPEN-202ENST00000438066 FMN1Q68DA7 1419 aa9.13□□□□□ -0.95
SPEN-202ENST00000438066 BACH1O14867 736 aa9.13□□□□□ -0.95
SPEN-202ENST00000438066 LDHBP07195 334 aaKnown RBP9.13□□□□□ -0.95
SPEN-202ENST00000438066 LDLRAD1Q5T700 205 aa9.13□□□□□ -0.95
SPEN-202ENST00000438066 THSD4Q6ZMP0 1018 aa9.13□□□□□ -0.95
SPEN-202ENST00000438066 SMARCA5O60264 1052 aaPredicted RBP9.12□□□□□ -0.95
SPEN-202ENST00000438066 EIF1AXP47813 144 aaKnown RBP9.12□□□□□ -0.95
SPEN-202ENST00000438066 VASH1Q7L8A9 365 aaPredicted RBP9.12□□□□□ -0.95
SPEN-202ENST00000438066 TMEM87AQ8NBN3 555 aa9.12□□□□□ -0.95
SPEN-202ENST00000438066 MRS2Q9HD23 443 aa9.12□□□□□ -0.95
SPEN-202ENST00000438066 RNF19AQ9NV58 838 aa9.12□□□□□ -0.95
SPEN-202ENST00000438066 PARP2Q9UGN5 583 aa9.12□□□□□ -0.95
SPEN-202ENST00000438066 SYNJ2O15056 1496 aa9.12□□□□□ -0.95
SPEN-202ENST00000438066 LRRC9Q6ZRR7 1453 aa9.12□□□□□ -0.95
SPEN-202ENST00000438066 A0A1W2PRU2 124 aa9.11□□□□□ -0.95
SPEN-202ENST00000438066 ERVK-9P63128 1117 aa9.11□□□□□ -0.95
SPEN-202ENST00000438066 TBCELQ5QJ74 424 aa9.11□□□□□ -0.95
SPEN-202ENST00000438066 CC2D2BQ6DHV5 1058 aa9.11□□□□□ -0.95
SPEN-202ENST00000438066 DUSP9Q99956 384 aaKnown RBP9.11□□□□□ -0.95
SPEN-202ENST00000438066 PRKD2Q9BZL6 878 aa9.11□□□□□ -0.95
SPEN-202ENST00000438066 OSBPL3Q9H4L5 887 aa9.11□□□□□ -0.95
SPEN-202ENST00000438066 RRBP1Q9P2E9 1410 aaKnown RBP9.11□□□□□ -0.95
SPEN-202ENST00000438066 KIAA0586Q9BVV6 1533 aa9.11□□□□□ -0.95
SPEN-202ENST00000438066 PPP1R12BO60237 982 aaPredicted RBP9.11□□□□□ -0.95
SPEN-202ENST00000438066 EPHA4P54764 986 aa9.11□□□□□ -0.95
SPEN-202ENST00000438066 PLCB3Q01970 1234 aa9.11□□□□□ -0.95
SPEN-202ENST00000438066 EHHADHQ08426 723 aa9.11□□□□□ -0.95
SPEN-202ENST00000438066 CEP170Q5SW79 1584 aa9.1□□□□□ -0.95
SPEN-202ENST00000438066 FZD6O60353 706 aa9.1□□□□□ -0.95
SPEN-202ENST00000438066 INHAP05111 366 aa9.1□□□□□ -0.95
SPEN-202ENST00000438066 DSC3Q14574 896 aa9.1□□□□□ -0.95
SPEN-202ENST00000438066 PIK3R5Q8WYR1 880 aa9.1□□□□□ -0.95
SPEN-202ENST00000438066 CYLDQ9NQC7 956 aa9.1□□□□□ -0.95
SPEN-202ENST00000438066 PRPF40AO75400 957 aaKnown RBP9.09□□□□□ -0.95
SPEN-202ENST00000438066 COX20Q5RI15 118 aa9.09□□□□□ -0.95
SPEN-202ENST00000438066 NT5DC4Q86YG4 428 aa9.09□□□□□ -0.95
SPEN-202ENST00000438066 NKX2-3Q8TAU0 364 aa9.09□□□□□ -0.95
SPEN-202ENST00000438066 CITED4Q96RK1 184 aa9.09□□□□□ -0.95
SPEN-202ENST00000438066 ETNK1Q9HBU6 452 aa9.09□□□□□ -0.95
SPEN-202ENST00000438066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.09□□□□□ -0.955e-7■■■■■ 26.9
SPEN-202ENST00000438066 TMPRSS4Q9NRS4 437 aa9.09□□□□□ -0.95
SPEN-202ENST00000438066 STIM2Q9P246 746 aa9.09□□□□□ -0.95
SPEN-202ENST00000438066 WWC3Q9ULE0 1092 aa9.09□□□□□ -0.95
SPEN-202ENST00000438066 KIAA0556O60303 1618 aa9.09□□□□□ -0.95
SPEN-202ENST00000438066 WASLO00401 505 aaPredicted RBP9.08□□□□□ -0.96
SPEN-202ENST00000438066 RAD51AP2Q09MP3 1159 aa9.08□□□□□ -0.96
SPEN-202ENST00000438066 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
SPEN-202ENST00000438066 DMRTB1Q96MA1 342 aa9.08□□□□□ -0.96
SPEN-202ENST00000438066 IL21Q9HBE4 155 aa9.08□□□□□ -0.96
SPEN-202ENST00000438066 GPR182O15218 404 aa9.08□□□□□ -0.96
SPEN-202ENST00000438066 ARID5BQ14865 1188 aa9.08□□□□□ -0.96
SPEN-202ENST00000438066 ALKBH2Q6NS38 261 aa9.08□□□□□ -0.96
SPEN-202ENST00000438066 KCTD12Q96CX2 325 aaKnown RBP9.08□□□□□ -0.96
SPEN-202ENST00000438066 SETDB2Q96T68 719 aa9.08□□□□□ -0.96
SPEN-202ENST00000438066 NUP160Q12769 1436 aa9.07□□□□□ -0.96
SPEN-202ENST00000438066 DISP1Q96F81 1524 aa9.07□□□□□ -0.96
SPEN-202ENST00000438066 HECW1Q76N89 1606 aa9.07□□□□□ -0.96
SPEN-202ENST00000438066 TNFRSF10BO14763 440 aa9.07□□□□□ -0.96
SPEN-202ENST00000438066 SORBS3O60504 671 aa9.07□□□□□ -0.96
SPEN-202ENST00000438066 ZEB1P37275 1124 aaPredicted RBP9.07□□□□□ -0.96
SPEN-202ENST00000438066 NYAP1Q6ZVC0 841 aa9.07□□□□□ -0.96
SPEN-202ENST00000438066 VTI1BQ9UEU0 232 aa9.07□□□□□ -0.96
SPEN-202ENST00000438066 IGHA2P01877 340 aa9.06□□□□□ -0.96
SPEN-202ENST00000438066 PSMD2Q13200 908 aa9.06□□□□□ -0.96
SPEN-202ENST00000438066 TMC4Q7Z404 712 aa9.06□□□□□ -0.96
SPEN-202ENST00000438066 METTL16Q86W50 562 aaKnown RBP9.06□□□□□ -0.96
SPEN-202ENST00000438066 ATCAYQ86WG3 371 aa9.06□□□□□ -0.96
SPEN-202ENST00000438066 SLC9A9Q8IVB4 645 aa9.06□□□□□ -0.96
SPEN-202ENST00000438066 C2orf49Q9BVC5 232 aaPredicted RBP9.06□□□□□ -0.96
SPEN-202ENST00000438066 MAP4K5Q9Y4K4 846 aa9.06□□□□□ -0.96
SPEN-202ENST00000438066 FGD1P98174 961 aa9.05□□□□□ -0.96
SPEN-202ENST00000438066 SPATA32Q96LK8 384 aa9.05□□□□□ -0.96
SPEN-202ENST00000438066 FAM129BQ96TA1 746 aa9.05□□□□□ -0.96
SPEN-202ENST00000438066 LRFN2Q9ULH4 789 aa9.05□□□□□ -0.96
SPEN-202ENST00000438066 ZBTB39O15060 712 aa9.05□□□□□ -0.96
SPEN-202ENST00000438066 ZBTB24O43167 697 aaPredicted RBP9.05□□□□□ -0.96
SPEN-202ENST00000438066 VARSP26640 1264 aaKnown RBP9.05□□□□□ -0.96
SPEN-202ENST00000438066 DAB2P98082 770 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms