RNA–Protein interactions for RNA: ENST00000436949.5

SEMA3A-204, Transcript of semaphorin 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA3A, Length 2,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-204ENST00000436949 CHMLP26374 656 aa8.15□□□□□ -1.1
SEMA3A-204ENST00000436949 MX1P20591 662 aa8.15□□□□□ -1.11
SEMA3A-204ENST00000436949 C17orf53Q8N3J3 647 aaPredicted RBP8.15□□□□□ -1.11
SEMA3A-204ENST00000436949 TSC1Q92574 1164 aa8.15□□□□□ -1.11
SEMA3A-204ENST00000436949 NGLY1Q96IV0 654 aa8.15□□□□□ -1.11
SEMA3A-204ENST00000436949 ATRNO75882 1429 aa8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 MAP3K19Q56UN5 1328 aa8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 GNAI2P04899 355 aa8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 PTMAP06454 111 aaKnown RBP8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 USP48Q86UV5 1035 aa8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 NUTM1Q86Y26 1132 aa8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 LRRCC1Q9C099 1032 aa8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 OSBPL3Q9H4L5 887 aa8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 MST1RQ04912 1400 aa8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 FKBP5Q13451 457 aaPredicted RBP8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 HS1BP3Q53T59 392 aa8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 LRRFIP2Q9Y608 721 aaKnown RBP8.14□□□□□ -1.11
SEMA3A-204ENST00000436949 CRB1P82279 1406 aa8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 SALL3Q9BXA9 1300 aa8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 CPA1P15085 419 aa8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 CUL4AQ13619 759 aa8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 TSPY26PQ9H489 355 aa8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 ACEP12821 1306 aa8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 TTC21BQ7Z4L5 1316 aa8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 KIAA0232Q92628 1395 aa8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 FAM177BA6PVY3 158 aa8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 ATF3P18847 181 aa8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 RTF1Q92541 710 aaKnown RBP8.13□□□□□ -1.11
SEMA3A-204ENST00000436949 CCT4P50991 539 aaKnown RBP8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 FLIIQ13045 1269 aa8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 BRINP3Q76B58 766 aa8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 LRRC59Q96AG4 307 aaKnown RBP8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 CCDC39Q9UFE4 941 aa8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 USP25Q9UHP3 1055 aa8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 CNPY2Q9Y2B0 182 aa8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 MBD3O95983 291 aa8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 DDX54Q8TDD1 881 aaKnown RBP8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 SLC26A8Q96RN1 970 aa8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 SRCIN1Q9C0H9 1055 aa8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 TTC12Q9H892 705 aaPredicted RBP8.12□□□□□ -1.11
SEMA3A-204ENST00000436949 MCCP23508 829 aa8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 HAP1P54257 671 aaPredicted RBP8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 NUTM2GQ5VZR2 741 aa8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 STK31Q9BXU1 1019 aa8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 MARF1Q9Y4F3 1742 aaKnown RBP8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 ADGRL3Q9HAR2 1447 aa8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 DLC1Q96QB1 1528 aa8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 HCLS1P14317 486 aaPredicted RBP8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 ATP8B2P98198 1209 aa8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 PLCB2Q00722 1185 aa8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 DNTTIP2Q5QJE6 756 aaKnown RBP8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 RASEFQ8IZ41 740 aa8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 PHAXQ9H814 394 aaKnown RBP8.11□□□□□ -1.11
SEMA3A-204ENST00000436949 ROBO2Q9HCK4 1378 aa8.1□□□□□ -1.11
SEMA3A-204ENST00000436949 EYA1Q99502 592 aa8.1□□□□□ -1.11
SEMA3A-204ENST00000436949 USP44Q9H0E7 712 aa8.1□□□□□ -1.11
SEMA3A-204ENST00000436949 SPG7Q9UQ90 795 aa8.1□□□□□ -1.11
SEMA3A-204ENST00000436949 NRXN3Q9Y4C0 1643 aa8.1□□□□□ -1.11
SEMA3A-204ENST00000436949 MCM2P49736 904 aa8.1□□□□□ -1.11
SEMA3A-204ENST00000436949 LTV1Q96GA3 475 aaPredicted RBP8.1□□□□□ -1.11
SEMA3A-204ENST00000436949 QTRT2Q9H974 415 aaKnown RBP8.1□□□□□ -1.11
SEMA3A-204ENST00000436949 PRDM10Q9NQV6 1147 aa8.1□□□□□ -1.11
SEMA3A-204ENST00000436949 RPAP1Q9BWH6 1393 aaPredicted RBP8.09□□□□□ -1.11
SEMA3A-204ENST00000436949 FIBPO43427 364 aa8.09□□□□□ -1.11
SEMA3A-204ENST00000436949 SURF6O75683 361 aaKnown RBP8.09□□□□□ -1.11
SEMA3A-204ENST00000436949 LARGE1O95461 756 aa8.09□□□□□ -1.11
SEMA3A-204ENST00000436949 TERF1P54274 439 aa8.09□□□□□ -1.11
SEMA3A-204ENST00000436949 FNBP4Q8N3X1 1017 aaPredicted RBP8.09□□□□□ -1.11
SEMA3A-204ENST00000436949 INTS4Q96HW7 963 aaKnown RBP8.09□□□□□ -1.11
SEMA3A-204ENST00000436949 TRPC5Q9UL62 973 aaPredicted RBP8.09□□□□□ -1.11
SEMA3A-204ENST00000436949 ADCY5O95622 1261 aa8.09□□□□□ -1.12
SEMA3A-204ENST00000436949 HSPA4P34932 840 aa8.09□□□□□ -1.12
SEMA3A-204ENST00000436949 AK2P54819 239 aa8.09□□□□□ -1.12
SEMA3A-204ENST00000436949 KIAA2012Q0VF49 1180 aa8.09□□□□□ -1.12
SEMA3A-204ENST00000436949 GIMAP6Q6P9H5 292 aa8.09□□□□□ -1.12
SEMA3A-204ENST00000436949 SASS6Q6UVJ0 657 aa8.09□□□□□ -1.12
SEMA3A-204ENST00000436949 CWC27Q6UX04 472 aaKnown RBP8.09□□□□□ -1.12
SEMA3A-204ENST00000436949 PPP1R42Q7Z4L9 355 aa8.09□□□□□ -1.12
SEMA3A-204ENST00000436949 SNX14Q9Y5W7 946 aa8.09□□□□□ -1.12
SEMA3A-204ENST00000436949 GNAI3P08754 354 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 UBTFL1P0CB47 393 aaPredicted RBP8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 AMPHP49418 695 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 ANAPC15P60006 121 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 COL9A3Q14050 684 aaPredicted RBP8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 CSPP1Q1MSJ5 1256 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 RUFY3Q7L099 469 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 WDR33Q9C0J8 1336 aaKnown RBP8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 STAP2Q9UGK3 403 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 CHMP3Q9Y3E7 222 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 PEAK1Q9H792 1746 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 PTPRUQ92729 1446 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 AP5Z1O43299 807 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 ANXA1P04083 346 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 NBPF7P0C2Y1 421 aaPredicted RBP8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 EIF2S2P20042 333 aaKnown RBP8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 SYT1P21579 422 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 MCM5P33992 734 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 USHBP1Q8N6Y0 703 aa8.08□□□□□ -1.12
SEMA3A-204ENST00000436949 IL17REQ8NFR9 667 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms