RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 C8orf58Q8NAV2 365 aa21.29■■□□□ 1
CTDSPL-204ENST00000435525 LINC00116Q8NCU8 138 aa21.29■■□□□ 1
CTDSPL-204ENST00000435525 STK31Q9BXU1 1019 aa21.28■■□□□ 1
CTDSPL-204ENST00000435525 TFCP2L1Q9NZI6 479 aa21.28■■□□□ 1
CTDSPL-204ENST00000435525 USP16Q9Y5T5 823 aa21.28■■□□□ 1
CTDSPL-204ENST00000435525 LY75O60449 1722 aa21.27■■□□□ 1
CTDSPL-204ENST00000435525 GNPATO15228 680 aa21.27■■□□□ 1
CTDSPL-204ENST00000435525 KRT24Q2M2I5 525 aa21.27■■□□□ 1
CTDSPL-204ENST00000435525 FLAD1Q8NFF5 587 aa21.27■■□□□ 1
CTDSPL-204ENST00000435525 ZNF428Q96B54 188 aa21.27■■□□□ 1
CTDSPL-204ENST00000435525 RTCBQ9Y3I0 505 aaKnown RBP21.27■■□□□ 1
CTDSPL-204ENST00000435525 ZNF831Q5JPB2 1677 aa21.27■■□□□ 1
CTDSPL-204ENST00000435525 UBR2Q8IWV8 1755 aa21.26■□□□□ 0.99
CTDSPL-204ENST00000435525 A0A087WZG4 1122 aa21.25■□□□□ 0.99
CTDSPL-204ENST00000435525 PRAMEF22A3QJZ6 481 aa21.25■□□□□ 0.99
CTDSPL-204ENST00000435525 DBF4Q9UBU7 674 aaPredicted RBP21.25■□□□□ 0.99
CTDSPL-204ENST00000435525 EP400Q96L91 3159 aa21.24■□□□□ 0.99
CTDSPL-204ENST00000435525 RPS6KA4O75676 772 aa21.24■□□□□ 0.99
CTDSPL-204ENST00000435525 ADRA2BP18089 450 aa21.24■□□□□ 0.99
CTDSPL-204ENST00000435525 CANXP27824 592 aaKnown RBP21.24■□□□□ 0.99
CTDSPL-204ENST00000435525 SLC15A2Q16348 729 aa21.24■□□□□ 0.99
CTDSPL-204ENST00000435525 TSPYL6Q8N831 410 aa21.24■□□□□ 0.99
CTDSPL-204ENST00000435525 NECTIN2Q92692 538 aa21.24■□□□□ 0.99
CTDSPL-204ENST00000435525 A1BGP04217 495 aa21.23■□□□□ 0.99
CTDSPL-204ENST00000435525 IL6STP40189 918 aaPredicted RBP21.23■□□□□ 0.99
CTDSPL-204ENST00000435525 AKT1S1Q96B36 256 aa21.23■□□□□ 0.99
CTDSPL-204ENST00000435525 VAMP4O75379 141 aa21.22■□□□□ 0.99
CTDSPL-204ENST00000435525 SSFA2P28290 1259 aa21.22■□□□□ 0.99
CTDSPL-204ENST00000435525 INTS5Q6P9B9 1019 aaKnown RBP21.22■□□□□ 0.99
CTDSPL-204ENST00000435525 DDX21Q9NR30 783 aaKnown RBP eCLIP21.22■□□□□ 0.99
CTDSPL-204ENST00000435525 HYPKQ9NX55 129 aa21.22■□□□□ 0.99
CTDSPL-204ENST00000435525 ZBTB1Q9Y2K1 713 aa21.22■□□□□ 0.99
CTDSPL-204ENST00000435525 ZNF330Q9Y3S2 320 aaPredicted RBP21.22■□□□□ 0.99
CTDSPL-204ENST00000435525 CICQ96RK0 1608 aaPredicted RBP21.22■□□□□ 0.99
CTDSPL-204ENST00000435525 TRAPPC3LQ5T215 181 aa21.21■□□□□ 0.99
CTDSPL-204ENST00000435525 C5P01031 1676 aa21.21■□□□□ 0.99
CTDSPL-204ENST00000435525 MSH5O43196 834 aa21.2■□□□□ 0.98
CTDSPL-204ENST00000435525 ZNF827Q17R98 1081 aa21.2■□□□□ 0.98
CTDSPL-204ENST00000435525 ARXQ96QS3 562 aa21.2■□□□□ 0.98
CTDSPL-204ENST00000435525 RREB1Q92766 1687 aa21.19■□□□□ 0.98
CTDSPL-204ENST00000435525 PHF14O94880 888 aa21.19■□□□□ 0.98
CTDSPL-204ENST00000435525 MYL6BP14649 208 aa21.19■□□□□ 0.98
CTDSPL-204ENST00000435525 ANO8Q9HCE9 1232 aaPredicted RBP21.19■□□□□ 0.98
CTDSPL-204ENST00000435525 CHPF2Q9P2E5 772 aa21.19■□□□□ 0.98
CTDSPL-204ENST00000435525 C4BP0C0L5 1744 aa21.18■□□□□ 0.98
CTDSPL-204ENST00000435525 TJP1Q07157 1748 aa21.18■□□□□ 0.98
CTDSPL-204ENST00000435525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.18■□□□□ 0.98
CTDSPL-204ENST00000435525 RFC4P35249 363 aa21.18■□□□□ 0.98
CTDSPL-204ENST00000435525 ALDH1L2Q3SY69 923 aa21.18■□□□□ 0.98
CTDSPL-204ENST00000435525 ZPR1O75312 459 aa21.17■□□□□ 0.98
CTDSPL-204ENST00000435525 EIF5P55010 431 aaKnown RBP21.17■□□□□ 0.98
CTDSPL-204ENST00000435525 KIF6Q6ZMV9 814 aa21.17■□□□□ 0.98
CTDSPL-204ENST00000435525 COL15A1P39059 1388 aa21.16■□□□□ 0.98
CTDSPL-204ENST00000435525 NBPF26B4DH59 902 aa21.16■□□□□ 0.98
CTDSPL-204ENST00000435525 DDX58O95786 925 aaKnown RBP21.16■□□□□ 0.98
CTDSPL-204ENST00000435525 SLC4A2P04920 1241 aa21.16■□□□□ 0.98
CTDSPL-204ENST00000435525 NBPF10Q6P3W6 841 aaKnown RBP21.16■□□□□ 0.98
CTDSPL-204ENST00000435525 NBPF15Q8N660 670 aa21.16■□□□□ 0.98
CTDSPL-204ENST00000435525 PIP4K2AP48426 406 aaPredicted RBP21.15■□□□□ 0.98
CTDSPL-204ENST00000435525 SMC4Q9NTJ3 1288 aa21.15■□□□□ 0.98
CTDSPL-204ENST00000435525 R3HDM1Q15032 1099 aaKnown RBP21.14■□□□□ 0.97
CTDSPL-204ENST00000435525 DZIP3Q86Y13 1208 aaKnown RBP21.14■□□□□ 0.97
CTDSPL-204ENST00000435525 ARHGEF1Q92888 912 aaKnown RBP21.14■□□□□ 0.97
CTDSPL-204ENST00000435525 LAMB4A4D0S4 1761 aa21.14■□□□□ 0.97
CTDSPL-204ENST00000435525 NUP188Q5SRE5 1749 aa21.14■□□□□ 0.97
CTDSPL-204ENST00000435525 TCERG1O14776 1098 aaKnown RBP21.13■□□□□ 0.97
CTDSPL-204ENST00000435525 PDIA6Q15084 440 aa21.13■□□□□ 0.97
CTDSPL-204ENST00000435525 SLC16A10Q8TF71 515 aa21.13■□□□□ 0.97
CTDSPL-204ENST00000435525 ZNF652Q9Y2D9 606 aa21.13■□□□□ 0.97
CTDSPL-204ENST00000435525 COL5A3P25940 1745 aaPredicted RBP21.12■□□□□ 0.97
CTDSPL-204ENST00000435525 AIMP1Q12904 312 aaKnown RBP21.12■□□□□ 0.97
CTDSPL-204ENST00000435525 XAGE3Q8WTP9 111 aa21.12■□□□□ 0.97
CTDSPL-204ENST00000435525 PNPLA7Q6ZV29 1317 aa21.11■□□□□ 0.97
CTDSPL-204ENST00000435525 ANXA1P04083 346 aa21.11■□□□□ 0.97
CTDSPL-204ENST00000435525 RARSP54136 660 aaKnown RBP21.11■□□□□ 0.97
CTDSPL-204ENST00000435525 PROSER3Q2NL68 480 aa21.11■□□□□ 0.97
CTDSPL-204ENST00000435525 COPS6Q7L5N1 327 aa21.11■□□□□ 0.97
CTDSPL-204ENST00000435525 COL23A1Q86Y22 540 aaPredicted RBP21.11■□□□□ 0.97
CTDSPL-204ENST00000435525 NARFQ9UHQ1 456 aa21.11■□□□□ 0.97
CTDSPL-204ENST00000435525 TAF1LQ8IZX4 1826 aa21.11■□□□□ 0.97
CTDSPL-204ENST00000435525 RGL2O15211 777 aa21.1■□□□□ 0.97
CTDSPL-204ENST00000435525 SSH1Q8WYL5 1049 aa21.1■□□□□ 0.97
CTDSPL-204ENST00000435525 TBC1D2BQ9UPU7 963 aa21.1■□□□□ 0.97
CTDSPL-204ENST00000435525 KIF16BQ96L93 1317 aa21.09■□□□□ 0.97
CTDSPL-204ENST00000435525 ERVV-1B6SEH8 477 aa21.09■□□□□ 0.97
CTDSPL-204ENST00000435525 IPO8O15397 1037 aaKnown RBP21.09■□□□□ 0.97
CTDSPL-204ENST00000435525 FLIIQ13045 1269 aa21.09■□□□□ 0.97
CTDSPL-204ENST00000435525 MAP3K15Q6ZN16 1313 aa21.08■□□□□ 0.97
CTDSPL-204ENST00000435525 PSDA5PKW4 1024 aaPredicted RBP21.08■□□□□ 0.97
CTDSPL-204ENST00000435525 FKBP5Q13451 457 aaPredicted RBP21.08■□□□□ 0.97
CTDSPL-204ENST00000435525 HSP90AB3PQ58FF7 597 aa21.08■□□□□ 0.97
CTDSPL-204ENST00000435525 CLEC4GQ6UXB4 293 aa21.08■□□□□ 0.97
CTDSPL-204ENST00000435525 ANKRD13DQ6ZTN6 518 aa21.08■□□□□ 0.97
CTDSPL-204ENST00000435525 RIC3Q7Z5B4 369 aa21.08■□□□□ 0.97
CTDSPL-204ENST00000435525 NLGN1Q8N2Q7 840 aa21.08■□□□□ 0.97
CTDSPL-204ENST00000435525 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.97
CTDSPL-204ENST00000435525 USP42Q9H9J4 1324 aaKnown RBP21.07■□□□□ 0.96
CTDSPL-204ENST00000435525 MRPL50Q8N5N7 158 aaKnown RBP21.07■□□□□ 0.96
CTDSPL-204ENST00000435525 PLBD2Q8NHP8 589 aa21.07■□□□□ 0.96
CTDSPL-204ENST00000435525 BCL2L13Q9BXK5 485 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms