RNA–Protein interactions for RNA: ENST00000433627.9

LSM14A-201, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LSM14A, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-201ENST00000433627 PRDM11Q9NQV5 511 aa16.84■□□□□ 0.29
LSM14A-201ENST00000433627 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.29
LSM14A-201ENST00000433627 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.29
LSM14A-201ENST00000433627 SSH3Q8TE77 659 aa16.83■□□□□ 0.29
LSM14A-201ENST00000433627 KIF1AQ12756 1690 aa16.83■□□□□ 0.29
LSM14A-201ENST00000433627 NCAPD2Q15021 1401 aa16.83■□□□□ 0.28
LSM14A-201ENST00000433627 IFNL2Q8IZJ0 200 aa16.83■□□□□ 0.28
LSM14A-201ENST00000433627 SLC52A2Q9HAB3 445 aa16.83■□□□□ 0.28
LSM14A-201ENST00000433627 KSR2Q6VAB6 950 aa16.83■□□□□ 0.28
LSM14A-201ENST00000433627 RHPN1Q8TCX5 695 aa16.83■□□□□ 0.28
LSM14A-201ENST00000433627 CACNA1FO60840 1977 aa16.82■□□□□ 0.28
LSM14A-201ENST00000433627 ANO2Q9NQ90 1003 aa16.82■□□□□ 0.28
LSM14A-201ENST00000433627 UNC5CLQ8IV45 518 aa16.82■□□□□ 0.28
LSM14A-201ENST00000433627 PA2G4Q9UQ80 394 aaKnown RBP16.82■□□□□ 0.28
LSM14A-201ENST00000433627 EIF5BO60841 1220 aaKnown RBP16.82■□□□□ 0.28
LSM14A-201ENST00000433627 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
LSM14A-201ENST00000433627 HYPKQ9NX55 129 aa16.82■□□□□ 0.28
LSM14A-201ENST00000433627 LMO7Q8WWI1 1683 aa16.81■□□□□ 0.28
LSM14A-201ENST00000433627 MCM4P33991 863 aa16.81■□□□□ 0.28
LSM14A-201ENST00000433627 RABEP1Q15276 862 aa16.81■□□□□ 0.28
LSM14A-201ENST00000433627 TOM1L2Q6ZVM7 507 aa16.81■□□□□ 0.28
LSM14A-201ENST00000433627 OSBPL3Q9H4L5 887 aa16.81■□□□□ 0.28
LSM14A-201ENST00000433627 SPATA31A3Q5VYP0 1347 aa16.81■□□□□ 0.28
LSM14A-201ENST00000433627 PXDNLA1KZ92 1463 aa16.81■□□□□ 0.28
LSM14A-201ENST00000433627 MEGF6O75095 1541 aa16.81■□□□□ 0.28
LSM14A-201ENST00000433627 DDX58O95786 925 aaKnown RBP16.81■□□□□ 0.28
LSM14A-201ENST00000433627 BRINP3Q76B58 766 aa16.81■□□□□ 0.28
LSM14A-201ENST00000433627 JARID2Q92833 1246 aaPredicted RBP16.81■□□□□ 0.28
LSM14A-201ENST00000433627 TNS3Q68CZ2 1445 aa16.81■□□□□ 0.28
LSM14A-201ENST00000433627 STRN4Q9NRL3 753 aa16.8■□□□□ 0.28
LSM14A-201ENST00000433627 STRCP1A6NGW2 1772 aa16.8■□□□□ 0.28
LSM14A-201ENST00000433627 CYP27B1O15528 508 aa16.8■□□□□ 0.28
LSM14A-201ENST00000433627 NOL8Q76FK4 1167 aaKnown RBP16.8■□□□□ 0.28
LSM14A-201ENST00000433627 KDM3BQ7LBC6 1761 aa16.8■□□□□ 0.28
LSM14A-201ENST00000433627 PHRF1Q9P1Y6 1649 aaKnown RBP16.8■□□□□ 0.28
LSM14A-201ENST00000433627 CABP4P57796 275 aa16.8■□□□□ 0.28
LSM14A-201ENST00000433627 DDX21Q9NR30 783 aaKnown RBP eCLIP16.8■□□□□ 0.28
LSM14A-201ENST00000433627 XAGE3Q8WTP9 111 aa16.79■□□□□ 0.28
LSM14A-201ENST00000433627 ZNF335Q9H4Z2 1342 aaPredicted RBP16.79■□□□□ 0.28
LSM14A-201ENST00000433627 KIF1BPQ96EK5 621 aa16.79■□□□□ 0.28
LSM14A-201ENST00000433627 COPS6Q7L5N1 327 aa16.79■□□□□ 0.28
LSM14A-201ENST00000433627 RAB11FIP3O75154 756 aa16.78■□□□□ 0.28
LSM14A-201ENST00000433627 POLA2Q14181 598 aa16.78■□□□□ 0.28
LSM14A-201ENST00000433627 ESYT1Q9BSJ8 1104 aa16.78■□□□□ 0.28
LSM14A-201ENST00000433627 SIL1Q9H173 461 aa16.78■□□□□ 0.28
LSM14A-201ENST00000433627 USP16Q9Y5T5 823 aa16.78■□□□□ 0.28
LSM14A-201ENST00000433627 KDM6AO15550 1401 aaPredicted RBP16.78■□□□□ 0.28
LSM14A-201ENST00000433627 SALL3Q9BXA9 1300 aa16.78■□□□□ 0.28
LSM14A-201ENST00000433627 MYD88Q99836 296 aa16.77■□□□□ 0.28
LSM14A-201ENST00000433627 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
LSM14A-201ENST00000433627 ALS2Q96Q42 1657 aa16.77■□□□□ 0.28
LSM14A-201ENST00000433627 ST18O60284 1047 aa16.77■□□□□ 0.27
LSM14A-201ENST00000433627 CHMLP26374 656 aa16.77■□□□□ 0.27
LSM14A-201ENST00000433627 NEXNQ0ZGT2 675 aa16.77■□□□□ 0.27
LSM14A-201ENST00000433627 TNPO1Q92973 898 aaKnown RBP16.77■□□□□ 0.27
LSM14A-201ENST00000433627 GRM8O00222 908 aa16.76■□□□□ 0.27
LSM14A-201ENST00000433627 ALDH1L1O75891 902 aa16.76■□□□□ 0.27
LSM14A-201ENST00000433627 LINS1Q8NG48 757 aa16.76■□□□□ 0.27
LSM14A-201ENST00000433627 SUCLG2Q96I99 432 aa16.76■□□□□ 0.27
LSM14A-201ENST00000433627 DCAF5Q96JK2 942 aa16.76■□□□□ 0.27
LSM14A-201ENST00000433627 PDIA6Q15084 440 aa16.76■□□□□ 0.27
LSM14A-201ENST00000433627 SLAIN2Q9P270 581 aa16.76■□□□□ 0.27
LSM14A-201ENST00000433627 DCCP43146 1447 aa16.75■□□□□ 0.27
LSM14A-201ENST00000433627 NEK4P51957 841 aa16.75■□□□□ 0.27
LSM14A-201ENST00000433627 HSP90AB4PQ58FF6 505 aa16.75■□□□□ 0.27
LSM14A-201ENST00000433627 BICC1Q9H694 974 aaKnown RBP16.75■□□□□ 0.27
LSM14A-201ENST00000433627 CLASRPQ8N2M8 674 aaKnown RBP16.75■□□□□ 0.27
LSM14A-201ENST00000433627 STAP2Q9UGK3 403 aa16.75■□□□□ 0.27
LSM14A-201ENST00000433627 MCCP23508 829 aa16.74■□□□□ 0.27
LSM14A-201ENST00000433627 KLHDC4Q8TBB5 520 aa16.74■□□□□ 0.27
LSM14A-201ENST00000433627 SNRPA1P09661 255 aaKnown RBP16.74■□□□□ 0.27
LSM14A-201ENST00000433627 SSFA2P28290 1259 aa16.74■□□□□ 0.27
LSM14A-201ENST00000433627 FMNL2Q96PY5 1086 aa16.74■□□□□ 0.27
LSM14A-201ENST00000433627 ATP5J2-PTCD1G3V325 749 aa16.74■□□□□ 0.27
LSM14A-201ENST00000433627 PTCD1O75127 700 aaKnown RBP16.74■□□□□ 0.27
LSM14A-201ENST00000433627 IFIT2P09913 472 aaKnown RBP16.74■□□□□ 0.27
LSM14A-201ENST00000433627 EVA1CP58658 441 aa16.74■□□□□ 0.27
LSM14A-201ENST00000433627 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
LSM14A-201ENST00000433627 BRPF3Q9ULD4 1205 aa16.74■□□□□ 0.27
LSM14A-201ENST00000433627 HEG1Q9ULI3 1381 aa16.73■□□□□ 0.27
LSM14A-201ENST00000433627 OVOS2A0A0G2JMS6 1433 aa16.73■□□□□ 0.27
LSM14A-201ENST00000433627 TRAK2O60296 914 aa16.73■□□□□ 0.27
LSM14A-201ENST00000433627 PALD1Q9ULE6 856 aa16.73■□□□□ 0.27
LSM14A-201ENST00000433627 ZNF330Q9Y3S2 320 aaPredicted RBP16.73■□□□□ 0.27
LSM14A-201ENST00000433627 NCOA3Q9Y6Q9 1424 aa16.73■□□□□ 0.27
LSM14A-201ENST00000433627 IGKV5-2P06315 115 aa16.73■□□□□ 0.27
LSM14A-201ENST00000433627 AACSQ86V21 672 aa16.73■□□□□ 0.27
LSM14A-201ENST00000433627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.273e-7■■■■□ 25.6
LSM14A-201ENST00000433627 G3BP1Q13283 466 aaKnown RBP eCLIP16.72■□□□□ 0.273e-8■■■■■ 29.9
LSM14A-201ENST00000433627 IL25Q9H293 177 aa16.72■□□□□ 0.27
LSM14A-201ENST00000433627 ZCRB1Q8TBF4 217 aaKnown RBP16.72■□□□□ 0.27
LSM14A-201ENST00000433627 GBP4Q96PP9 640 aa16.72■□□□□ 0.27
LSM14A-201ENST00000433627 UPF3BQ9BZI7 483 aaKnown RBP16.72■□□□□ 0.27
LSM14A-201ENST00000433627 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
LSM14A-201ENST00000433627 CWC27Q6UX04 472 aaKnown RBP16.71■□□□□ 0.27
LSM14A-201ENST00000433627 ANKRD13DQ6ZTN6 518 aa16.71■□□□□ 0.27
LSM14A-201ENST00000433627 PI4K2BQ8TCG2 481 aa16.71■□□□□ 0.27
LSM14A-201ENST00000433627 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
LSM14A-201ENST00000433627 CCDC8Q9H0W5 538 aaPredicted RBP16.71■□□□□ 0.27
LSM14A-201ENST00000433627 RTN4Q9NQC3 1192 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 177 ms