RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 BEND3Q5T5X7 828 aa24.35■■□□□ 1.49
VRK2-205ENST00000432057 PLEKHM2Q8IWE5 1019 aa24.34■■□□□ 1.49
VRK2-205ENST00000432057 ZCRB1Q8TBF4 217 aaKnown RBP24.34■■□□□ 1.49
VRK2-205ENST00000432057 TBC1D32Q96NH3 1257 aa24.34■■□□□ 1.49
VRK2-205ENST00000432057 C16orf71Q8IYS4 520 aaPredicted RBP24.34■■□□□ 1.49
VRK2-205ENST00000432057 ZNF496Q96IT1 587 aaPredicted RBP24.34■■□□□ 1.49
VRK2-205ENST00000432057 PNMA6EA0A0J9YXQ4 647 aa24.33■■□□□ 1.49
VRK2-205ENST00000432057 MFAP1P55081 439 aaKnown RBP24.33■■□□□ 1.49
VRK2-205ENST00000432057 HYPKQ9NX55 129 aa24.33■■□□□ 1.49
VRK2-205ENST00000432057 IL2RBP14784 551 aa24.32■■□□□ 1.48
VRK2-205ENST00000432057 CABP4P57796 275 aa24.32■■□□□ 1.48
VRK2-205ENST00000432057 EVA1CP58658 441 aa24.32■■□□□ 1.48
VRK2-205ENST00000432057 ATP8B2P98198 1209 aa24.32■■□□□ 1.48
VRK2-205ENST00000432057 AEBP2Q6ZN18 517 aaPredicted RBP24.32■■□□□ 1.48
VRK2-205ENST00000432057 TTC5Q8N0Z6 440 aa24.32■■□□□ 1.48
VRK2-205ENST00000432057 OTUD7AQ8TE49 926 aaPredicted RBP24.32■■□□□ 1.48
VRK2-205ENST00000432057 DDX21Q9NR30 783 aaKnown RBP eCLIP24.32■■□□□ 1.48
VRK2-205ENST00000432057 TUBGCP6Q96RT7 1819 aa24.32■■□□□ 1.48
VRK2-205ENST00000432057 SLC4A3P48751 1232 aa24.32■■□□□ 1.48
VRK2-205ENST00000432057 PDIA6Q15084 440 aa24.32■■□□□ 1.48
VRK2-205ENST00000432057 MAP3K2Q9Y2U5 619 aa24.32■■□□□ 1.48
VRK2-205ENST00000432057 EXOC6BQ9Y2D4 811 aa24.31■■□□□ 1.48
VRK2-205ENST00000432057 WNK3Q9BYP7 1800 aa24.31■■□□□ 1.48
VRK2-205ENST00000432057 GSPT1P15170 499 aaKnown RBP24.3■■□□□ 1.48
VRK2-205ENST00000432057 KSR2Q6VAB6 950 aa24.3■■□□□ 1.48
VRK2-205ENST00000432057 PHLPP1O60346 1717 aa24.3■■□□□ 1.48
VRK2-205ENST00000432057 AFDNP55196 1824 aaKnown RBP24.3■■□□□ 1.48
VRK2-205ENST00000432057 ARFGEF2Q9Y6D5 1785 aa24.3■■□□□ 1.48
VRK2-205ENST00000432057 PLCH1Q4KWH8 1693 aa24.29■■□□□ 1.48
VRK2-205ENST00000432057 NBPF7P0C2Y1 421 aaPredicted RBP24.28■■□□□ 1.48
VRK2-205ENST00000432057 TTC22Q5TAA0 569 aa24.28■■□□□ 1.48
VRK2-205ENST00000432057 FMNL2Q96PY5 1086 aa24.28■■□□□ 1.48
VRK2-205ENST00000432057 AIMP1Q12904 312 aaKnown RBP24.27■■□□□ 1.48
VRK2-205ENST00000432057 BTG4Q9NY30 223 aa24.27■■□□□ 1.48
VRK2-205ENST00000432057 DAXXQ9UER7 740 aaPredicted RBP24.27■■□□□ 1.48
VRK2-205ENST00000432057 IBTKQ9P2D0 1353 aaPredicted RBP24.26■■□□□ 1.47
VRK2-205ENST00000432057 SNRPA1P09661 255 aaKnown RBP24.26■■□□□ 1.47
VRK2-205ENST00000432057 MYL6BP14649 208 aa24.26■■□□□ 1.47
VRK2-205ENST00000432057 C22orf23Q9BZE7 217 aa24.26■■□□□ 1.47
VRK2-205ENST00000432057 KCPQ6ZWJ8 1503 aa24.25■■□□□ 1.47
VRK2-205ENST00000432057 ITGB4P16144 1822 aa24.25■■□□□ 1.47
VRK2-205ENST00000432057 DDX58O95786 925 aaKnown RBP24.25■■□□□ 1.47
VRK2-205ENST00000432057 DDX54Q8TDD1 881 aaKnown RBP24.25■■□□□ 1.47
VRK2-205ENST00000432057 USP35Q9P2H5 1018 aa24.25■■□□□ 1.47
VRK2-205ENST00000432057 USP16Q9Y5T5 823 aa24.25■■□□□ 1.47
VRK2-205ENST00000432057 ALDH1L1O75891 902 aa24.24■■□□□ 1.47
VRK2-205ENST00000432057 NKX1-1Q15270 411 aaPredicted RBP24.24■■□□□ 1.47
VRK2-205ENST00000432057 TBC1D9Q6ZT07 1266 aa24.24■■□□□ 1.47
VRK2-205ENST00000432057 SSH3Q8TE77 659 aa24.24■■□□□ 1.47
VRK2-205ENST00000432057 CWF19L2Q2TBE0 894 aaKnown RBP24.24■■□□□ 1.47
VRK2-205ENST00000432057 PPP1R42Q7Z4L9 355 aa24.24■■□□□ 1.47
VRK2-205ENST00000432057 ERVV-2B6SEH9 535 aa24.23■■□□□ 1.47
VRK2-205ENST00000432057 LRRCC1Q9C099 1032 aa24.23■■□□□ 1.47
VRK2-205ENST00000432057 CDC45O75419 566 aa24.22■■□□□ 1.47
VRK2-205ENST00000432057 POLA2Q14181 598 aa24.22■■□□□ 1.47
VRK2-205ENST00000432057 XAGE3Q8WTP9 111 aa24.22■■□□□ 1.47
VRK2-205ENST00000432057 TOM1O60784 492 aa24.21■■□□□ 1.47
VRK2-205ENST00000432057 PIP4K2AP48426 406 aaPredicted RBP24.21■■□□□ 1.47
VRK2-205ENST00000432057 NUP188Q5SRE5 1749 aa24.21■■□□□ 1.47
VRK2-205ENST00000432057 NRAPQ86VF7 1730 aa24.21■■□□□ 1.47
VRK2-205ENST00000432057 LRP10Q7Z4F1 713 aa24.2■■□□□ 1.46
VRK2-205ENST00000432057 RIC3Q7Z5B4 369 aa24.2■■□□□ 1.46
VRK2-205ENST00000432057 LINS1Q8NG48 757 aa24.2■■□□□ 1.46
VRK2-205ENST00000432057 C9orf78Q9NZ63 289 aaPredicted RBP24.2■■□□□ 1.46
VRK2-205ENST00000432057 AK9Q5TCS8 1911 aa24.19■■□□□ 1.46
VRK2-205ENST00000432057 SRGAP3O43295 1099 aa24.19■■□□□ 1.46
VRK2-205ENST00000432057 COPS6Q7L5N1 327 aa24.19■■□□□ 1.46
VRK2-205ENST00000432057 SALL3Q9BXA9 1300 aa24.19■■□□□ 1.46
VRK2-205ENST00000432057 DISP2A7MBM2 1401 aa24.19■■□□□ 1.46
VRK2-205ENST00000432057 TNS2Q63HR2 1409 aa24.18■■□□□ 1.46
VRK2-205ENST00000432057 PDE1AP54750 535 aa24.17■■□□□ 1.46
VRK2-205ENST00000432057 OSBPL3Q9H4L5 887 aa24.17■■□□□ 1.46
VRK2-205ENST00000432057 SDSP20132 328 aa24.17■■□□□ 1.46
VRK2-205ENST00000432057 BECN1Q14457 450 aa24.17■■□□□ 1.46
VRK2-205ENST00000432057 IGKV5-2P06315 115 aa24.16■■□□□ 1.46
VRK2-205ENST00000432057 SURF6O75683 361 aaKnown RBP24.15■■□□□ 1.46
VRK2-205ENST00000432057 GRM8O00222 908 aa24.15■■□□□ 1.46
VRK2-205ENST00000432057 NBR1Q14596 966 aa24.15■■□□□ 1.46
VRK2-205ENST00000432057 TSHZ3Q63HK5 1081 aa24.15■■□□□ 1.46
VRK2-205ENST00000432057 UTYO14607 1347 aa24.15■■□□□ 1.46
VRK2-205ENST00000432057 RBM25P49756 843 aaKnown RBP24.14■■□□□ 1.45
VRK2-205ENST00000432057 MTX1Q13505 466 aa24.14■■□□□ 1.45
VRK2-205ENST00000432057 MYD88Q99836 296 aa24.14■■□□□ 1.45
VRK2-205ENST00000432057 METTL22Q9BUU2 404 aaPredicted RBP24.14■■□□□ 1.45
VRK2-205ENST00000432057 RAB11FIP3O75154 756 aa24.13■■□□□ 1.45
VRK2-205ENST00000432057 MX1P20591 662 aa24.13■■□□□ 1.45
VRK2-205ENST00000432057 NEXNQ0ZGT2 675 aa24.13■■□□□ 1.45
VRK2-205ENST00000432057 IL1RAPL2Q9NP60 686 aa24.13■■□□□ 1.45
VRK2-205ENST00000432057 KAT6BQ8WYB5 2073 aa24.13■■□□□ 1.45
VRK2-205ENST00000432057 NEURL1BA8MQ27 555 aa24.13■■□□□ 1.45
VRK2-205ENST00000432057 ANKRD13DQ6ZTN6 518 aa24.13■■□□□ 1.45
VRK2-205ENST00000432057 SUCLG2Q96I99 432 aa24.13■■□□□ 1.45
VRK2-205ENST00000432057 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.13■■□□□ 1.45
VRK2-205ENST00000432057 LRP6O75581 1613 aa24.12■■□□□ 1.45
VRK2-205ENST00000432057 DOT1LQ8TEK3 1739 aa24.12■■□□□ 1.45
VRK2-205ENST00000432057 PTCD1O75127 700 aaKnown RBP24.12■■□□□ 1.45
VRK2-205ENST00000432057 ERBB4Q15303 1308 aa24.12■■□□□ 1.45
VRK2-205ENST00000432057 TMOD3Q9NYL9 352 aa24.11■■□□□ 1.45
VRK2-205ENST00000432057 TJP1Q07157 1748 aa24.11■■□□□ 1.45
VRK2-205ENST00000432057 NBPF26B4DH59 902 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms