RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 MIS18AQ9NYP9 233 aa23.98■■□□□ 1.43
SSR4P1-202ENST00000429427 ZNF316A6NFI3 1004 aaPredicted RBP23.97■■□□□ 1.43
SSR4P1-202ENST00000429427 MAPK8IP3Q9UPT6 1336 aa23.97■■□□□ 1.43
SSR4P1-202ENST00000429427 STARD3NLO95772 234 aa23.96■■□□□ 1.43
SSR4P1-202ENST00000429427 NEFMP07197 916 aa23.96■■□□□ 1.43
SSR4P1-202ENST00000429427 CANXP27824 592 aaKnown RBP23.96■■□□□ 1.43
SSR4P1-202ENST00000429427 DDR1Q08345 913 aa23.96■■□□□ 1.43
SSR4P1-202ENST00000429427 TAF7Q15545 349 aaPredicted RBP23.96■■□□□ 1.43
SSR4P1-202ENST00000429427 CCDC146Q8IYE0 955 aa23.96■■□□□ 1.43
SSR4P1-202ENST00000429427 KDM3BQ7LBC6 1761 aa23.96■■□□□ 1.43
SSR4P1-202ENST00000429427 KIAA1551Q9HCM1 1747 aa23.96■■□□□ 1.43
SSR4P1-202ENST00000429427 C10orf71Q711Q0 1435 aa23.95■■□□□ 1.42
SSR4P1-202ENST00000429427 YBX3P16989 372 aaKnown RBP eCLIP23.95■■□□□ 1.42
SSR4P1-202ENST00000429427 EIF5P55010 431 aaKnown RBP23.95■■□□□ 1.42
SSR4P1-202ENST00000429427 USPL1Q5W0Q7 1092 aa23.95■■□□□ 1.42
SSR4P1-202ENST00000429427 PNNQ9H307 717 aaKnown RBP23.95■■□□□ 1.42
SSR4P1-202ENST00000429427 BCL2L12Q9HB09 334 aa23.95■■□□□ 1.42
SSR4P1-202ENST00000429427 ADAMTS8Q9UP79 889 aa23.95■■□□□ 1.42
SSR4P1-202ENST00000429427 USP16Q9Y5T5 823 aa23.95■■□□□ 1.42
SSR4P1-202ENST00000429427 KIF13BQ9NQT8 1826 aa23.94■■□□□ 1.42
SSR4P1-202ENST00000429427 A1BGP04217 495 aa23.94■■□□□ 1.42
SSR4P1-202ENST00000429427 DCAF8L1A6NGE4 600 aa23.93■■□□□ 1.42
SSR4P1-202ENST00000429427 TMPOP42166 694 aaKnown RBP23.93■■□□□ 1.42
SSR4P1-202ENST00000429427 TEX13AQ9BXU3 409 aaPredicted RBP23.93■■□□□ 1.42
SSR4P1-202ENST00000429427 NARFQ9UHQ1 456 aa23.93■■□□□ 1.42
SSR4P1-202ENST00000429427 CCDC184Q52MB2 194 aa23.92■■□□□ 1.42
SSR4P1-202ENST00000429427 RRP7AQ9Y3A4 280 aaKnown RBP23.92■■□□□ 1.42
SSR4P1-202ENST00000429427 PXDNLA1KZ92 1463 aa23.92■■□□□ 1.42
SSR4P1-202ENST00000429427 TM4SF1P30408 202 aa23.91■■□□□ 1.42
SSR4P1-202ENST00000429427 PIP4K2AP48426 406 aaPredicted RBP23.91■■□□□ 1.42
SSR4P1-202ENST00000429427 RIPK4P57078 832 aa23.91■■□□□ 1.42
SSR4P1-202ENST00000429427 GPR162Q16538 588 aa23.91■■□□□ 1.42
SSR4P1-202ENST00000429427 WDR43Q15061 677 aaKnown RBP eCLIP23.9■■□□□ 1.42
SSR4P1-202ENST00000429427 SCN7AQ01118 1682 aa23.89■■□□□ 1.42
SSR4P1-202ENST00000429427 POLRMTO00411 1230 aaKnown RBP23.89■■□□□ 1.41
SSR4P1-202ENST00000429427 ZPR1O75312 459 aa23.89■■□□□ 1.41
SSR4P1-202ENST00000429427 SNRPA1P09661 255 aaKnown RBP23.89■■□□□ 1.41
SSR4P1-202ENST00000429427 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.41
SSR4P1-202ENST00000429427 YY1P25490 414 aa23.88■■□□□ 1.41
SSR4P1-202ENST00000429427 IL6STP40189 918 aaPredicted RBP23.88■■□□□ 1.41
SSR4P1-202ENST00000429427 RUNDC1Q96C34 613 aa23.88■■□□□ 1.41
SSR4P1-202ENST00000429427 PARP3Q9Y6F1 533 aa23.88■■□□□ 1.41
SSR4P1-202ENST00000429427 NBPF26B4DH59 902 aa23.87■■□□□ 1.41
SSR4P1-202ENST00000429427 EIF4A1P60842 406 aaKnown RBP23.87■■□□□ 1.41
SSR4P1-202ENST00000429427 NFIXQ14938 502 aa23.87■■□□□ 1.41
SSR4P1-202ENST00000429427 NBPF10Q6P3W6 841 aaKnown RBP23.87■■□□□ 1.41
SSR4P1-202ENST00000429427 NBPF15Q8N660 670 aa23.87■■□□□ 1.41
SSR4P1-202ENST00000429427 WWC3Q9ULE0 1092 aa23.87■■□□□ 1.41
SSR4P1-202ENST00000429427 TRIM35Q9UPQ4 493 aa23.87■■□□□ 1.41
SSR4P1-202ENST00000429427 LAMB4A4D0S4 1761 aa23.86■■□□□ 1.41
SSR4P1-202ENST00000429427 PNISRQ8TF01 805 aaKnown RBP23.85■■□□□ 1.41
SSR4P1-202ENST00000429427 TBC1D2BQ9UPU7 963 aa23.85■■□□□ 1.41
SSR4P1-202ENST00000429427 ZNF330Q9Y3S2 320 aaPredicted RBP23.85■■□□□ 1.41
SSR4P1-202ENST00000429427 N4BP2Q86UW6 1770 aaPredicted RBP23.85■■□□□ 1.41
SSR4P1-202ENST00000429427 NRXN2Q9P2S2 1712 aa23.84■■□□□ 1.41
SSR4P1-202ENST00000429427 GIGYF1O75420 1035 aaPredicted RBP23.84■■□□□ 1.41
SSR4P1-202ENST00000429427 NEUROD2Q15784 382 aa23.84■■□□□ 1.41
SSR4P1-202ENST00000429427 A0A087WZG4 1122 aa23.83■■□□□ 1.41
SSR4P1-202ENST00000429427 CAMTA2O94983 1202 aa23.83■■□□□ 1.41
SSR4P1-202ENST00000429427 BCORQ6W2J9 1755 aa23.83■■□□□ 1.4
SSR4P1-202ENST00000429427 AFDNP55196 1824 aaKnown RBP23.82■■□□□ 1.4
SSR4P1-202ENST00000429427 A0A0G2JLW4 131 aa23.82■■□□□ 1.4
SSR4P1-202ENST00000429427 DPEP1P16444 411 aa23.81■■□□□ 1.4
SSR4P1-202ENST00000429427 KCNA3P22001 575 aa23.81■■□□□ 1.4
SSR4P1-202ENST00000429427 TGFB2P61812 414 aa23.81■■□□□ 1.4
SSR4P1-202ENST00000429427 TBC1D9BQ66K14 1250 aa23.81■■□□□ 1.4
SSR4P1-202ENST00000429427 CHD4Q14839 1912 aa23.8■■□□□ 1.4
SSR4P1-202ENST00000429427 LMOD3Q0VAK6 560 aa23.8■■□□□ 1.4
SSR4P1-202ENST00000429427 TSPYL4Q9UJ04 414 aa23.8■■□□□ 1.4
SSR4P1-202ENST00000429427 CARMIL3Q8ND23 1372 aa23.79■■□□□ 1.4
SSR4P1-202ENST00000429427 BRCA1P38398 1863 aaKnown RBP23.79■■□□□ 1.4
SSR4P1-202ENST00000429427 BICDL1Q6ZP65 573 aa23.78■■□□□ 1.4
SSR4P1-202ENST00000429427 DZIP3Q86Y13 1208 aaKnown RBP23.78■■□□□ 1.4
SSR4P1-202ENST00000429427 GRIN3BO60391 1043 aa23.77■■□□□ 1.4
SSR4P1-202ENST00000429427 SERPINB2P05120 415 aa23.77■■□□□ 1.4
SSR4P1-202ENST00000429427 APAF1O14727 1248 aa23.76■■□□□ 1.39
SSR4P1-202ENST00000429427 BABAM1Q9NWV8 329 aa23.76■■□□□ 1.39
SSR4P1-202ENST00000429427 CHL1O00533 1208 aa23.75■■□□□ 1.39
SSR4P1-202ENST00000429427 CHRNA5P30532 468 aa23.75■■□□□ 1.39
SSR4P1-202ENST00000429427 KRT24Q2M2I5 525 aa23.74■■□□□ 1.39
SSR4P1-202ENST00000429427 LRP10Q7Z4F1 713 aa23.73■■□□□ 1.39
SSR4P1-202ENST00000429427 ANP32CO43423 234 aa23.72■■□□□ 1.39
SSR4P1-202ENST00000429427 ZNF784Q8NCA9 323 aaPredicted RBP23.72■■□□□ 1.39
SSR4P1-202ENST00000429427 ANKRD31Q8N7Z5 1873 aa23.71■■□□□ 1.39
SSR4P1-202ENST00000429427 PDIA6Q15084 440 aa23.71■■□□□ 1.39
SSR4P1-202ENST00000429427 PRR5LQ6MZQ0 368 aa23.71■■□□□ 1.39
SSR4P1-202ENST00000429427 HLFQ16534 295 aa23.7■■□□□ 1.38
SSR4P1-202ENST00000429427 PROSER3Q2NL68 480 aa23.7■■□□□ 1.38
SSR4P1-202ENST00000429427 NPM2Q86SE8 214 aaKnown RBP23.7■■□□□ 1.38
SSR4P1-202ENST00000429427 CCDC24Q8N4L8 307 aa23.7■■□□□ 1.38
SSR4P1-202ENST00000429427 BCS1LQ9Y276 419 aa23.7■■□□□ 1.38
SSR4P1-202ENST00000429427 SENP3-EIF4A1A0A087X0R7 540 aa23.69■■□□□ 1.38
SSR4P1-202ENST00000429427 CLEC4GQ6UXB4 293 aa23.69■■□□□ 1.38
SSR4P1-202ENST00000429427 TTLL7Q6ZT98 887 aa23.69■■□□□ 1.38
SSR4P1-202ENST00000429427 NGEFQ8N5V2 710 aa23.69■■□□□ 1.38
SSR4P1-202ENST00000429427 MRS2Q9HD23 443 aa23.69■■□□□ 1.38
SSR4P1-202ENST00000429427 LAS1LQ9Y4W2 734 aaKnown RBP23.69■■□□□ 1.38
SSR4P1-202ENST00000429427 ZNF853P0CG23 659 aa23.68■■□□□ 1.38
SSR4P1-202ENST00000429427 MYL6BP14649 208 aa23.68■■□□□ 1.38
SSR4P1-202ENST00000429427 SETDB2Q96T68 719 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms