RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 PRAMEF22A3QJZ6 481 aa20.52■□□□□ 0.88
PCDH8P1-201ENST00000428983 ST18O60284 1047 aa20.51■□□□□ 0.87
PCDH8P1-201ENST00000428983 MAP3K5Q99683 1374 aa20.51■□□□□ 0.87
PCDH8P1-201ENST00000428983 UNC5CLQ8IV45 518 aa20.51■□□□□ 0.87
PCDH8P1-201ENST00000428983 KIF24Q5T7B8 1368 aa20.51■□□□□ 0.87
PCDH8P1-201ENST00000428983 USP44Q9H0E7 712 aa20.51■□□□□ 0.87
PCDH8P1-201ENST00000428983 CWC22Q9HCG8 908 aaKnown RBP20.51■□□□□ 0.87
PCDH8P1-201ENST00000428983 PRDM4Q9UKN5 801 aa20.51■□□□□ 0.87
PCDH8P1-201ENST00000428983 NUTM1Q86Y26 1132 aa20.5■□□□□ 0.87
PCDH8P1-201ENST00000428983 DDX17Q92841 729 aaKnown RBP20.5■□□□□ 0.87
PCDH8P1-201ENST00000428983 TRIM6-TRIM34B2RNG4 842 aa20.5■□□□□ 0.87
PCDH8P1-201ENST00000428983 ANKLE2Q86XL3 938 aa20.5■□□□□ 0.87
PCDH8P1-201ENST00000428983 CHPF2Q9P2E5 772 aa20.5■□□□□ 0.87
PCDH8P1-201ENST00000428983 HMMRO75330 724 aa20.49■□□□□ 0.87
PCDH8P1-201ENST00000428983 NWD1Q149M9 1564 aa20.49■□□□□ 0.87
PCDH8P1-201ENST00000428983 NBPF7P0C2Y1 421 aaPredicted RBP20.48■□□□□ 0.87
PCDH8P1-201ENST00000428983 TPRNQ4KMQ1 711 aa20.48■□□□□ 0.87
PCDH8P1-201ENST00000428983 TSC1Q92574 1164 aa20.48■□□□□ 0.87
PCDH8P1-201ENST00000428983 NEK4P51957 841 aa20.48■□□□□ 0.87
PCDH8P1-201ENST00000428983 PRDM10Q9NQV6 1147 aa20.47■□□□□ 0.87
PCDH8P1-201ENST00000428983 IL25Q9H293 177 aa20.47■□□□□ 0.87
PCDH8P1-201ENST00000428983 GDPD2Q9HCC8 539 aa20.47■□□□□ 0.87
PCDH8P1-201ENST00000428983 IP6K1Q92551 441 aa20.46■□□□□ 0.87
PCDH8P1-201ENST00000428983 ZNF830Q96NB3 372 aaPredicted RBP20.46■□□□□ 0.87
PCDH8P1-201ENST00000428983 LRRCC1Q9C099 1032 aa20.46■□□□□ 0.87
PCDH8P1-201ENST00000428983 AXIN2Q9Y2T1 843 aa20.46■□□□□ 0.87
PCDH8P1-201ENST00000428983 PI4KAP2A4QPH2 592 aa20.46■□□□□ 0.87
PCDH8P1-201ENST00000428983 DTNBO60941 627 aa20.46■□□□□ 0.87
PCDH8P1-201ENST00000428983 ZNF530Q6P9A1 599 aaPredicted RBP20.46■□□□□ 0.87
PCDH8P1-201ENST00000428983 PI4KAP1Q8N8J0 262 aa20.46■□□□□ 0.87
PCDH8P1-201ENST00000428983 TMX3Q96JJ7 454 aa20.46■□□□□ 0.87
PCDH8P1-201ENST00000428983 PTMAP06454 111 aaKnown RBP20.45■□□□□ 0.86
PCDH8P1-201ENST00000428983 UBTFL1P0CB47 393 aaPredicted RBP20.45■□□□□ 0.86
PCDH8P1-201ENST00000428983 ZC3H6P61129 1189 aaKnown RBP20.45■□□□□ 0.86
PCDH8P1-201ENST00000428983 CCDC39Q9UFE4 941 aa20.45■□□□□ 0.86
PCDH8P1-201ENST00000428983 PALD1Q9ULE6 856 aa20.45■□□□□ 0.86
PCDH8P1-201ENST00000428983 MARF1Q9Y4F3 1742 aaKnown RBP20.44■□□□□ 0.86
PCDH8P1-201ENST00000428983 ATP8B2P98198 1209 aa20.44■□□□□ 0.86
PCDH8P1-201ENST00000428983 PROSER3Q2NL68 480 aa20.44■□□□□ 0.86
PCDH8P1-201ENST00000428983 XRN1Q8IZH2 1706 aaKnown RBP20.44■□□□□ 0.86
PCDH8P1-201ENST00000428983 MX1P20591 662 aa20.44■□□□□ 0.86
PCDH8P1-201ENST00000428983 CASC1Q6TDU7 716 aa20.44■□□□□ 0.86
PCDH8P1-201ENST00000428983 PPP1R42Q7Z4L9 355 aa20.44■□□□□ 0.86
PCDH8P1-201ENST00000428983 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.44■□□□□ 0.86
PCDH8P1-201ENST00000428983 SURF6O75683 361 aaKnown RBP20.43■□□□□ 0.86
PCDH8P1-201ENST00000428983 EIF4A1P60842 406 aaKnown RBP20.43■□□□□ 0.86
PCDH8P1-201ENST00000428983 BTBD11A6QL63 1104 aa20.43■□□□□ 0.86
PCDH8P1-201ENST00000428983 GCP02774 474 aa20.43■□□□□ 0.86
PCDH8P1-201ENST00000428983 TEFQ10587 303 aa20.43■□□□□ 0.86
PCDH8P1-201ENST00000428983 CSPP1Q1MSJ5 1256 aa20.43■□□□□ 0.86
PCDH8P1-201ENST00000428983 DYNC1I1O14576 645 aa20.42■□□□□ 0.86
PCDH8P1-201ENST00000428983 ERC2O15083 957 aa20.42■□□□□ 0.86
PCDH8P1-201ENST00000428983 GADD45BO75293 160 aaPredicted RBP20.42■□□□□ 0.86
PCDH8P1-201ENST00000428983 GNAI3P08754 354 aa20.42■□□□□ 0.86
PCDH8P1-201ENST00000428983 SASS6Q6UVJ0 657 aa20.42■□□□□ 0.86
PCDH8P1-201ENST00000428983 HTATSF1O43719 755 aaKnown RBP20.42■□□□□ 0.86
PCDH8P1-201ENST00000428983 REC8O95072 547 aa20.42■□□□□ 0.86
PCDH8P1-201ENST00000428983 C17orf53Q8N3J3 647 aaPredicted RBP20.42■□□□□ 0.86
PCDH8P1-201ENST00000428983 MAP7D2Q96T17 732 aa20.42■□□□□ 0.86
PCDH8P1-201ENST00000428983 ANO2Q9NQ90 1003 aa20.41■□□□□ 0.86
PCDH8P1-201ENST00000428983 RGPD2P0DJD1 1756 aa20.41■□□□□ 0.86
PCDH8P1-201ENST00000428983 FAM177BA6PVY3 158 aa20.41■□□□□ 0.86
PCDH8P1-201ENST00000428983 SRGAP3O43295 1099 aa20.4■□□□□ 0.86
PCDH8P1-201ENST00000428983 ANKARQ7Z5J8 1434 aa20.4■□□□□ 0.86
PCDH8P1-201ENST00000428983 AIMP1Q12904 312 aaKnown RBP20.4■□□□□ 0.86
PCDH8P1-201ENST00000428983 DNTTIP2Q5QJE6 756 aaKnown RBP20.4■□□□□ 0.86
PCDH8P1-201ENST00000428983 LARP6Q9BRS8 491 aaKnown RBP20.4■□□□□ 0.86
PCDH8P1-201ENST00000428983 MCM5P33992 734 aa20.4■□□□□ 0.86
PCDH8P1-201ENST00000428983 PIP4K2AP48426 406 aaPredicted RBP20.4■□□□□ 0.86
PCDH8P1-201ENST00000428983 UPF3BQ9BZI7 483 aaKnown RBP20.4■□□□□ 0.86
PCDH8P1-201ENST00000428983 TSPY26PQ9H489 355 aa20.4■□□□□ 0.86
PCDH8P1-201ENST00000428983 SRCIN1Q9C0H9 1055 aa20.39■□□□□ 0.85
PCDH8P1-201ENST00000428983 SOS1Q07889 1333 aaPredicted RBP20.39■□□□□ 0.85
PCDH8P1-201ENST00000428983 BRD1O95696 1058 aa20.39■□□□□ 0.85
PCDH8P1-201ENST00000428983 SLC39A6Q13433 755 aa20.39■□□□□ 0.85
PCDH8P1-201ENST00000428983 CWF19L2Q2TBE0 894 aaKnown RBP20.39■□□□□ 0.85
PCDH8P1-201ENST00000428983 LTN1O94822 1766 aa20.38■□□□□ 0.85
PCDH8P1-201ENST00000428983 SALL3Q9BXA9 1300 aa20.38■□□□□ 0.85
PCDH8P1-201ENST00000428983 ANKRD24Q8TF21 1146 aa20.38■□□□□ 0.85
PCDH8P1-201ENST00000428983 CABLES1Q8TDN4 633 aa20.38■□□□□ 0.85
PCDH8P1-201ENST00000428983 MBD3O95983 291 aa20.37■□□□□ 0.85
PCDH8P1-201ENST00000428983 PA2G4Q9UQ80 394 aaKnown RBP20.37■□□□□ 0.85
PCDH8P1-201ENST00000428983 KIAA2012Q0VF49 1180 aa20.36■□□□□ 0.85
PCDH8P1-201ENST00000428983 ESYT1Q9BSJ8 1104 aa20.36■□□□□ 0.85
PCDH8P1-201ENST00000428983 PXDNQ92626 1479 aa20.36■□□□□ 0.85
PCDH8P1-201ENST00000428983 CHMLP26374 656 aa20.36■□□□□ 0.85
PCDH8P1-201ENST00000428983 OSBPL3Q9H4L5 887 aa20.36■□□□□ 0.85
PCDH8P1-201ENST00000428983 DNAAF4Q8WXU2 420 aa20.35■□□□□ 0.85
PCDH8P1-201ENST00000428983 TTC12Q9H892 705 aaPredicted RBP20.35■□□□□ 0.85
PCDH8P1-201ENST00000428983 USP25Q9UHP3 1055 aa20.35■□□□□ 0.85
PCDH8P1-201ENST00000428983 ZHX1Q9UKY1 873 aaPredicted RBP20.35■□□□□ 0.85
PCDH8P1-201ENST00000428983 BEND3Q5T5X7 828 aa20.34■□□□□ 0.85
PCDH8P1-201ENST00000428983 CEMIPQ8WUJ3 1361 aa20.34■□□□□ 0.85
PCDH8P1-201ENST00000428983 FAM208AQ9UK61 1670 aaKnown RBP20.34■□□□□ 0.85
PCDH8P1-201ENST00000428983 C1orf141Q5JVX7 400 aa20.34■□□□□ 0.85
PCDH8P1-201ENST00000428983 USP48Q86UV5 1035 aa20.34■□□□□ 0.85
PCDH8P1-201ENST00000428983 ARHGEF25Q86VW2 580 aa20.34■□□□□ 0.85
PCDH8P1-201ENST00000428983 PROSER2Q86WR7 435 aaPredicted RBP20.34■□□□□ 0.85
PCDH8P1-201ENST00000428983 MAP3K2Q9Y2U5 619 aa20.34■□□□□ 0.85
PCDH8P1-201ENST00000428983 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms