RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 UTRNP46939 3433 aa14.21□□□□□ -0.13
ATG4B-210ENST00000428861 GYS1P13807 737 aa14.2□□□□□ -0.14
ATG4B-210ENST00000428861 KLHL34Q8N239 644 aa14.2□□□□□ -0.14
ATG4B-210ENST00000428861 NLGN2Q8NFZ4 835 aa14.2□□□□□ -0.14
ATG4B-210ENST00000428861 RUNDC1Q96C34 613 aa14.2□□□□□ -0.14
ATG4B-210ENST00000428861 USP16Q9Y5T5 823 aa14.2□□□□□ -0.14
ATG4B-210ENST00000428861 C4AP0C0L4 1744 aa14.2□□□□□ -0.14
ATG4B-210ENST00000428861 CANXP27824 592 aaKnown RBP14.19□□□□□ -0.14
ATG4B-210ENST00000428861 RFC4P35249 363 aa14.19□□□□□ -0.14
ATG4B-210ENST00000428861 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
ATG4B-210ENST00000428861 USP42Q9H9J4 1324 aaKnown RBP14.18□□□□□ -0.14
ATG4B-210ENST00000428861 A1BGP04217 495 aa14.18□□□□□ -0.14
ATG4B-210ENST00000428861 FKBP8Q14318 412 aa14.18□□□□□ -0.14
ATG4B-210ENST00000428861 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
ATG4B-210ENST00000428861 ANP32CO43423 234 aa14.17□□□□□ -0.14
ATG4B-210ENST00000428861 STARD3NLO95772 234 aa14.17□□□□□ -0.14
ATG4B-210ENST00000428861 MMP10P09238 476 aa14.17□□□□□ -0.14
ATG4B-210ENST00000428861 PIP4K2AP48426 406 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-210ENST00000428861 EIF5P55010 431 aaKnown RBP14.17□□□□□ -0.14
ATG4B-210ENST00000428861 BCL2L12Q9HB09 334 aa14.17□□□□□ -0.14
ATG4B-210ENST00000428861 EIF4A1P60842 406 aaKnown RBP14.16□□□□□ -0.14
ATG4B-210ENST00000428861 USPL1Q5W0Q7 1092 aa14.16□□□□□ -0.14
ATG4B-210ENST00000428861 TEX13AQ9BXU3 409 aaPredicted RBP14.16□□□□□ -0.14
ATG4B-210ENST00000428861 COL15A1P39059 1388 aa14.16□□□□□ -0.14
ATG4B-210ENST00000428861 GOLGB1Q14789 3259 aaKnown RBP14.16□□□□□ -0.14
ATG4B-210ENST00000428861 KDM3BQ7LBC6 1761 aa14.15□□□□□ -0.14
ATG4B-210ENST00000428861 SENP3-EIF4A1A0A087X0R7 540 aa14.15□□□□□ -0.14
ATG4B-210ENST00000428861 APAF1O14727 1248 aa14.15□□□□□ -0.14
ATG4B-210ENST00000428861 SNRPA1P09661 255 aaKnown RBP14.15□□□□□ -0.14
ATG4B-210ENST00000428861 DDR1Q08345 913 aa14.15□□□□□ -0.14
ATG4B-210ENST00000428861 NLGN1Q8N2Q7 840 aa14.15□□□□□ -0.14
ATG4B-210ENST00000428861 PNISRQ8TF01 805 aaKnown RBP14.15□□□□□ -0.14
ATG4B-210ENST00000428861 NBPF26B4DH59 902 aa14.14□□□□□ -0.15
ATG4B-210ENST00000428861 NBPF10Q6P3W6 841 aaKnown RBP14.14□□□□□ -0.15
ATG4B-210ENST00000428861 NBPF15Q8N660 670 aa14.14□□□□□ -0.15
ATG4B-210ENST00000428861 NARFQ9UHQ1 456 aa14.14□□□□□ -0.15
ATG4B-210ENST00000428861 GIGYF1O75420 1035 aaPredicted RBP14.13□□□□□ -0.15
ATG4B-210ENST00000428861 IL6STP40189 918 aaPredicted RBP14.13□□□□□ -0.15
ATG4B-210ENST00000428861 MRS2Q9HD23 443 aa14.13□□□□□ -0.15
ATG4B-210ENST00000428861 TSPYL4Q9UJ04 414 aa14.13□□□□□ -0.15
ATG4B-210ENST00000428861 CD2APQ9Y5K6 639 aa14.13□□□□□ -0.15
ATG4B-210ENST00000428861 ZPR1O75312 459 aa14.12□□□□□ -0.15
ATG4B-210ENST00000428861 TM4SF1P30408 202 aa14.12□□□□□ -0.15
ATG4B-210ENST00000428861 LMOD3Q0VAK6 560 aa14.12□□□□□ -0.15
ATG4B-210ENST00000428861 TBC1D2BQ9UPU7 963 aa14.12□□□□□ -0.15
ATG4B-210ENST00000428861 ZNF330Q9Y3S2 320 aaPredicted RBP14.12□□□□□ -0.15
ATG4B-210ENST00000428861 POLRMTO00411 1230 aaKnown RBP14.11□□□□□ -0.15
ATG4B-210ENST00000428861 NFIXQ14938 502 aa14.11□□□□□ -0.15
ATG4B-210ENST00000428861 KRT24Q2M2I5 525 aa14.11□□□□□ -0.15
ATG4B-210ENST00000428861 CHL1O00533 1208 aa14.1□□□□□ -0.15
ATG4B-210ENST00000428861 CAMTA2O94983 1202 aa14.1□□□□□ -0.15
ATG4B-210ENST00000428861 YBX3P16989 372 aaKnown RBP eCLIP14.1□□□□□ -0.15
ATG4B-210ENST00000428861 C10orf71Q711Q0 1435 aa14.09□□□□□ -0.15
ATG4B-210ENST00000428861 BABAM1Q9NWV8 329 aa14.09□□□□□ -0.15
ATG4B-210ENST00000428861 WWC3Q9ULE0 1092 aa14.09□□□□□ -0.15
ATG4B-210ENST00000428861 LAS1LQ9Y4W2 734 aaKnown RBP14.09□□□□□ -0.15
ATG4B-210ENST00000428861 PARP3Q9Y6F1 533 aa14.09□□□□□ -0.15
ATG4B-210ENST00000428861 A0A087WZG4 1122 aa14.08□□□□□ -0.16
ATG4B-210ENST00000428861 TBC1D9BQ66K14 1250 aa14.08□□□□□ -0.16
ATG4B-210ENST00000428861 KIAA1551Q9HCM1 1747 aa14.07□□□□□ -0.16
ATG4B-210ENST00000428861 PXDNLA1KZ92 1463 aa14.07□□□□□ -0.16
ATG4B-210ENST00000428861 LAMB4A4D0S4 1761 aa14.07□□□□□ -0.16
ATG4B-210ENST00000428861 ZNF853P0CG23 659 aa14.07□□□□□ -0.16
ATG4B-210ENST00000428861 GPR162Q16538 588 aa14.07□□□□□ -0.16
ATG4B-210ENST00000428861 BICDL1Q6ZP65 573 aa14.07□□□□□ -0.16
ATG4B-210ENST00000428861 DZIP3Q86Y13 1208 aaKnown RBP14.07□□□□□ -0.16
ATG4B-210ENST00000428861 PELP1Q8IZL8 1130 aaKnown RBP14.07□□□□□ -0.16
ATG4B-210ENST00000428861 KIF13BQ9NQT8 1826 aa14.06□□□□□ -0.16
ATG4B-210ENST00000428861 PDIA6Q15084 440 aa14.06□□□□□ -0.16
ATG4B-210ENST00000428861 PROSER3Q2NL68 480 aa14.06□□□□□ -0.16
ATG4B-210ENST00000428861 LRP10Q7Z4F1 713 aa14.06□□□□□ -0.16
ATG4B-210ENST00000428861 CFAP44Q96MT7 982 aa14.06□□□□□ -0.16
ATG4B-210ENST00000428861 MBIPQ9NS73 344 aa14.06□□□□□ -0.16
ATG4B-210ENST00000428861 SCN7AQ01118 1682 aa14.06□□□□□ -0.16
ATG4B-210ENST00000428861 A0A0G2JLW4 131 aa14.05□□□□□ -0.16
ATG4B-210ENST00000428861 ANXA1P04083 346 aa14.05□□□□□ -0.16
ATG4B-210ENST00000428861 SERPINB2P05120 415 aa14.05□□□□□ -0.16
ATG4B-210ENST00000428861 DPEP1P16444 411 aa14.05□□□□□ -0.16
ATG4B-210ENST00000428861 EIF2S2P20042 333 aaKnown RBP14.05□□□□□ -0.16
ATG4B-210ENST00000428861 KCNA3P22001 575 aa14.05□□□□□ -0.16
ATG4B-210ENST00000428861 HLFQ16534 295 aa14.05□□□□□ -0.16
ATG4B-210ENST00000428861 TTLL7Q6ZT98 887 aa14.05□□□□□ -0.16
ATG4B-210ENST00000428861 NGEFQ8N5V2 710 aa14.05□□□□□ -0.16
ATG4B-210ENST00000428861 CARMIL3Q8ND23 1372 aa14.05□□□□□ -0.16
ATG4B-210ENST00000428861 DCAF8L1A6NGE4 600 aa14.04□□□□□ -0.16
ATG4B-210ENST00000428861 MYL6BP14649 208 aa14.04□□□□□ -0.16
ATG4B-210ENST00000428861 NECTIN2Q92692 538 aa14.04□□□□□ -0.16
ATG4B-210ENST00000428861 BCORQ6W2J9 1755 aa14.04□□□□□ -0.16
ATG4B-210ENST00000428861 N4BP2Q86UW6 1770 aaPredicted RBP14.04□□□□□ -0.16
ATG4B-210ENST00000428861 AFDNP55196 1824 aaKnown RBP14.04□□□□□ -0.16
ATG4B-210ENST00000428861 CHRNA5P30532 468 aa14.03□□□□□ -0.16
ATG4B-210ENST00000428861 TGFB2P61812 414 aa14.03□□□□□ -0.16
ATG4B-210ENST00000428861 FAM9BQ8IZU0 186 aa14.03□□□□□ -0.16
ATG4B-210ENST00000428861 CCDC24Q8N4L8 307 aa14.03□□□□□ -0.16
ATG4B-210ENST00000428861 IFT57Q9NWB7 429 aa14.03□□□□□ -0.16
ATG4B-210ENST00000428861 NRXN2Q9P2S2 1712 aa14.03□□□□□ -0.16
ATG4B-210ENST00000428861 NPM2Q86SE8 214 aaKnown RBP14.02□□□□□ -0.17
ATG4B-210ENST00000428861 WWC1Q8IX03 1113 aa14.02□□□□□ -0.17
ATG4B-210ENST00000428861 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
ATG4B-210ENST00000428861 PRR5LQ6MZQ0 368 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms