RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TTC5Q8N0Z6 440 aa27.05■■□□□ 1.92
CNEP1R1-202ENST00000427478 ZNF496Q96IT1 587 aaPredicted RBP27.05■■□□□ 1.92
CNEP1R1-202ENST00000427478 ATP8B2P98198 1209 aa27.04■■□□□ 1.92
CNEP1R1-202ENST00000427478 HYPKQ9NX55 129 aa27.04■■□□□ 1.92
CNEP1R1-202ENST00000427478 DAXXQ9UER7 740 aaPredicted RBP27.04■■□□□ 1.92
CNEP1R1-202ENST00000427478 IL2RBP14784 551 aa27.04■■□□□ 1.92
CNEP1R1-202ENST00000427478 DDX21Q9NR30 783 aaKnown RBP eCLIP27.04■■□□□ 1.92
CNEP1R1-202ENST00000427478 OTUD7AQ8TE49 926 aaPredicted RBP27.03■■□□□ 1.92
CNEP1R1-202ENST00000427478 EXOC6BQ9Y2D4 811 aa27.03■■□□□ 1.92
CNEP1R1-202ENST00000427478 MAP3K2Q9Y2U5 619 aa27.03■■□□□ 1.92
CNEP1R1-202ENST00000427478 AHDC1Q5TGY3 1603 aaPredicted RBP27.01■■□□□ 1.91
CNEP1R1-202ENST00000427478 PDIA6Q15084 440 aa27.01■■□□□ 1.91
CNEP1R1-202ENST00000427478 GSPT1P15170 499 aaKnown RBP27.01■■□□□ 1.91
CNEP1R1-202ENST00000427478 KSR2Q6VAB6 950 aa27.01■■□□□ 1.91
CNEP1R1-202ENST00000427478 LAMB4A4D0S4 1761 aa27■■□□□ 1.91
CNEP1R1-202ENST00000427478 NBPF7P0C2Y1 421 aaPredicted RBP27■■□□□ 1.91
CNEP1R1-202ENST00000427478 GLI3P10071 1580 aa27■■□□□ 1.91
CNEP1R1-202ENST00000427478 FMNL2Q96PY5 1086 aa26.99■■□□□ 1.91
CNEP1R1-202ENST00000427478 LTBP4Q8N2S1 1624 aa26.99■■□□□ 1.91
CNEP1R1-202ENST00000427478 AIMP1Q12904 312 aaKnown RBP26.99■■□□□ 1.91
CNEP1R1-202ENST00000427478 TTC22Q5TAA0 569 aa26.99■■□□□ 1.91
CNEP1R1-202ENST00000427478 C22orf23Q9BZE7 217 aa26.98■■□□□ 1.91
CNEP1R1-202ENST00000427478 COL14A1Q05707 1796 aaKnown RBP26.98■■□□□ 1.91
CNEP1R1-202ENST00000427478 SNRPA1P09661 255 aaKnown RBP26.98■■□□□ 1.91
CNEP1R1-202ENST00000427478 MYL6BP14649 208 aa26.98■■□□□ 1.91
CNEP1R1-202ENST00000427478 USP35Q9P2H5 1018 aa26.98■■□□□ 1.91
CNEP1R1-202ENST00000427478 COL22A1Q8NFW1 1626 aaPredicted RBP26.97■■□□□ 1.91
CNEP1R1-202ENST00000427478 DDX54Q8TDD1 881 aaKnown RBP26.97■■□□□ 1.91
CNEP1R1-202ENST00000427478 BTG4Q9NY30 223 aa26.97■■□□□ 1.91
CNEP1R1-202ENST00000427478 DDX58O95786 925 aaKnown RBP26.96■■□□□ 1.91
CNEP1R1-202ENST00000427478 UBR2Q8IWV8 1755 aa26.96■■□□□ 1.91
CNEP1R1-202ENST00000427478 TBC1D9Q6ZT07 1266 aa26.96■■□□□ 1.91
CNEP1R1-202ENST00000427478 USP16Q9Y5T5 823 aa26.96■■□□□ 1.91
CNEP1R1-202ENST00000427478 IBTKQ9P2D0 1353 aaPredicted RBP26.96■■□□□ 1.91
CNEP1R1-202ENST00000427478 COL16A1Q07092 1604 aaPredicted RBP26.95■■□□□ 1.91
CNEP1R1-202ENST00000427478 PAPPAQ13219 1627 aa26.95■■□□□ 1.9
CNEP1R1-202ENST00000427478 PPP1R42Q7Z4L9 355 aa26.95■■□□□ 1.9
CNEP1R1-202ENST00000427478 SSH3Q8TE77 659 aa26.95■■□□□ 1.9
CNEP1R1-202ENST00000427478 LRRCC1Q9C099 1032 aa26.95■■□□□ 1.9
CNEP1R1-202ENST00000427478 ALDH1L1O75891 902 aa26.94■■□□□ 1.9
CNEP1R1-202ENST00000427478 CWF19L2Q2TBE0 894 aaKnown RBP26.94■■□□□ 1.9
CNEP1R1-202ENST00000427478 TOGARAM1Q9Y4F4 1720 aa26.94■■□□□ 1.9
CNEP1R1-202ENST00000427478 ERVV-2B6SEH9 535 aa26.93■■□□□ 1.9
CNEP1R1-202ENST00000427478 CDC45O75419 566 aa26.93■■□□□ 1.9
CNEP1R1-202ENST00000427478 NKX1-1Q15270 411 aaPredicted RBP26.93■■□□□ 1.9
CNEP1R1-202ENST00000427478 C9orf78Q9NZ63 289 aaPredicted RBP26.92■■□□□ 1.9
CNEP1R1-202ENST00000427478 PIP4K2AP48426 406 aaPredicted RBP26.92■■□□□ 1.9
CNEP1R1-202ENST00000427478 XAGE3Q8WTP9 111 aa26.92■■□□□ 1.9
CNEP1R1-202ENST00000427478 SRGAP3O43295 1099 aa26.91■■□□□ 1.9
CNEP1R1-202ENST00000427478 POLA2Q14181 598 aa26.91■■□□□ 1.9
CNEP1R1-202ENST00000427478 RIC3Q7Z5B4 369 aa26.91■■□□□ 1.9
CNEP1R1-202ENST00000427478 LINS1Q8NG48 757 aa26.9■■□□□ 1.9
CNEP1R1-202ENST00000427478 COPS6Q7L5N1 327 aa26.9■■□□□ 1.9
CNEP1R1-202ENST00000427478 PHLPP1O60346 1717 aa26.89■■□□□ 1.9
CNEP1R1-202ENST00000427478 BECN1Q14457 450 aa26.89■■□□□ 1.9
CNEP1R1-202ENST00000427478 NBR1Q14596 966 aa26.89■■□□□ 1.9
CNEP1R1-202ENST00000427478 KCPQ6ZWJ8 1503 aa26.89■■□□□ 1.89
CNEP1R1-202ENST00000427478 TUBGCP6Q96RT7 1819 aa26.88■■□□□ 1.89
CNEP1R1-202ENST00000427478 PDE1AP54750 535 aa26.88■■□□□ 1.89
CNEP1R1-202ENST00000427478 LRP10Q7Z4F1 713 aa26.88■■□□□ 1.89
CNEP1R1-202ENST00000427478 ARFGEF2Q9Y6D5 1785 aa26.88■■□□□ 1.89
CNEP1R1-202ENST00000427478 SURF6O75683 361 aaKnown RBP26.87■■□□□ 1.89
CNEP1R1-202ENST00000427478 SDSP20132 328 aa26.87■■□□□ 1.89
CNEP1R1-202ENST00000427478 OSBPL3Q9H4L5 887 aa26.87■■□□□ 1.89
CNEP1R1-202ENST00000427478 AFDNP55196 1824 aaKnown RBP26.87■■□□□ 1.89
CNEP1R1-202ENST00000427478 SALL3Q9BXA9 1300 aa26.86■■□□□ 1.89
CNEP1R1-202ENST00000427478 PLCH1Q4KWH8 1693 aa26.85■■□□□ 1.89
CNEP1R1-202ENST00000427478 GRM8O00222 908 aa26.85■■□□□ 1.89
CNEP1R1-202ENST00000427478 IGKV5-2P06315 115 aa26.85■■□□□ 1.89
CNEP1R1-202ENST00000427478 RBM25P49756 843 aaKnown RBP26.85■■□□□ 1.89
CNEP1R1-202ENST00000427478 NEXNQ0ZGT2 675 aa26.84■■□□□ 1.89
CNEP1R1-202ENST00000427478 TSHZ3Q63HK5 1081 aa26.84■■□□□ 1.89
CNEP1R1-202ENST00000427478 MX1P20591 662 aa26.84■■□□□ 1.89
CNEP1R1-202ENST00000427478 WNK3Q9BYP7 1800 aa26.84■■□□□ 1.89
CNEP1R1-202ENST00000427478 RAB11FIP3O75154 756 aa26.83■■□□□ 1.89
CNEP1R1-202ENST00000427478 ANKRD13DQ6ZTN6 518 aa26.83■■□□□ 1.89
CNEP1R1-202ENST00000427478 MYD88Q99836 296 aa26.83■■□□□ 1.89
CNEP1R1-202ENST00000427478 IL1RAPL2Q9NP60 686 aa26.83■■□□□ 1.89
CNEP1R1-202ENST00000427478 DISP2A7MBM2 1401 aa26.83■■□□□ 1.88
CNEP1R1-202ENST00000427478 MTX1Q13505 466 aa26.83■■□□□ 1.88
CNEP1R1-202ENST00000427478 METTL22Q9BUU2 404 aaPredicted RBP26.83■■□□□ 1.88
CNEP1R1-202ENST00000427478 UTYO14607 1347 aa26.82■■□□□ 1.88
CNEP1R1-202ENST00000427478 TNS2Q63HR2 1409 aa26.82■■□□□ 1.88
CNEP1R1-202ENST00000427478 HDAC5Q9UQL6 1122 aa26.82■■□□□ 1.88
CNEP1R1-202ENST00000427478 NEURL1BA8MQ27 555 aa26.81■■□□□ 1.88
CNEP1R1-202ENST00000427478 PTCD1O75127 700 aaKnown RBP26.81■■□□□ 1.88
CNEP1R1-202ENST00000427478 SUCLG2Q96I99 432 aa26.81■■□□□ 1.88
CNEP1R1-202ENST00000427478 TBC1D2Q9BYX2 928 aa26.81■■□□□ 1.88
CNEP1R1-202ENST00000427478 ITGB4P16144 1822 aa26.81■■□□□ 1.88
CNEP1R1-202ENST00000427478 RHPN1Q8TCX5 695 aa26.8■■□□□ 1.88
CNEP1R1-202ENST00000427478 TMOD3Q9NYL9 352 aa26.8■■□□□ 1.88
CNEP1R1-202ENST00000427478 KIF1BPQ96EK5 621 aa26.79■■□□□ 1.88
CNEP1R1-202ENST00000427478 ERBB4Q15303 1308 aa26.79■■□□□ 1.88
CNEP1R1-202ENST00000427478 NBPF26B4DH59 902 aa26.78■■□□□ 1.88
CNEP1R1-202ENST00000427478 NBPF14Q5TI25 921 aa26.78■■□□□ 1.88
CNEP1R1-202ENST00000427478 NBPF10Q6P3W6 841 aaKnown RBP26.78■■□□□ 1.88
CNEP1R1-202ENST00000427478 NBPF15Q8N660 670 aa26.78■■□□□ 1.88
CNEP1R1-202ENST00000427478 KAZALD1Q96I82 304 aa26.78■■□□□ 1.88
CNEP1R1-202ENST00000427478 GCKRQ14397 625 aa26.78■■□□□ 1.88
CNEP1R1-202ENST00000427478 CASC1Q6TDU7 716 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms