RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 BAZ1AQ9NRL2 1556 aaPredicted RBP10.66□□□□□ -0.7
HMGB1P32-201ENST00000425971 NPR3P17342 541 aa10.66□□□□□ -0.7
HMGB1P32-201ENST00000425971 SMPD1P17405 629 aa10.66□□□□□ -0.7
HMGB1P32-201ENST00000425971 ARHGAP4P98171 946 aa10.66□□□□□ -0.7
HMGB1P32-201ENST00000425971 TRIM67Q6ZTA4 783 aa10.66□□□□□ -0.7
HMGB1P32-201ENST00000425971 NBPF15Q8N660 670 aa10.66□□□□□ -0.7
HMGB1P32-201ENST00000425971 AGBL1Q96MI9 1066 aa10.66□□□□□ -0.7
HMGB1P32-201ENST00000425971 IRX2Q9BZI1 471 aaPredicted RBP10.66□□□□□ -0.7
HMGB1P32-201ENST00000425971 TNFRSF10AO00220 468 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 PRR20EP86478 221 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 PRR20CP86479 221 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 PRR20DP86480 221 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 PRR20BP86481 221 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 PRR20AP86496 221 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 MEIOBQ8N635 442 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 VTI1AQ96AJ9 217 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 RIMBP3CA6NJZ7 1639 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 RIMBP3BA6NNM3 1639 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 RIMBP3Q9UFD9 1639 aa10.65□□□□□ -0.7
HMGB1P32-201ENST00000425971 HIRAP54198 1017 aaPredicted RBP10.64□□□□□ -0.71
HMGB1P32-201ENST00000425971 C16orf46Q6P387 395 aa10.64□□□□□ -0.71
HMGB1P32-201ENST00000425971 SAP130Q9H0E3 1048 aa10.64□□□□□ -0.71
HMGB1P32-201ENST00000425971 EML1O00423 815 aa10.63□□□□□ -0.71
HMGB1P32-201ENST00000425971 CENPCQ03188 943 aa10.63□□□□□ -0.71
HMGB1P32-201ENST00000425971 ZDHHC1Q8WTX9 485 aa10.63□□□□□ -0.71
HMGB1P32-201ENST00000425971 MYO19Q96H55 970 aa10.63□□□□□ -0.71
HMGB1P32-201ENST00000425971 QTRT2Q9H974 415 aaKnown RBP10.63□□□□□ -0.71
HMGB1P32-201ENST00000425971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.63□□□□□ -0.71
HMGB1P32-201ENST00000425971 RBM25P49756 843 aaKnown RBP10.62□□□□□ -0.71
HMGB1P32-201ENST00000425971 RELBQ01201 579 aa10.62□□□□□ -0.71
HMGB1P32-201ENST00000425971 TEAD4Q15561 434 aa10.62□□□□□ -0.71
HMGB1P32-201ENST00000425971 PPARGC1BQ86YN6 1023 aaKnown RBP10.62□□□□□ -0.71
HMGB1P32-201ENST00000425971 DCTN4Q9UJW0 460 aa10.62□□□□□ -0.71
HMGB1P32-201ENST00000425971 MEN1O00255 615 aa10.61□□□□□ -0.71
HMGB1P32-201ENST00000425971 TNFRSF10BO14763 440 aa10.61□□□□□ -0.71
HMGB1P32-201ENST00000425971 COX20Q5RI15 118 aa10.61□□□□□ -0.71
HMGB1P32-201ENST00000425971 RBM47A0AV96 593 aaKnown RBP10.6□□□□□ -0.71
HMGB1P32-201ENST00000425971 SERTM1A2A2V5 107 aa10.6□□□□□ -0.71
HMGB1P32-201ENST00000425971 FAM13AO94988 1023 aa10.6□□□□□ -0.71
HMGB1P32-201ENST00000425971 MPSTP25325 297 aa10.6□□□□□ -0.71
HMGB1P32-201ENST00000425971 SH3PXD2AQ5TCZ1 1133 aa10.6□□□□□ -0.71
HMGB1P32-201ENST00000425971 NPAS4Q8IUM7 802 aa10.6□□□□□ -0.71
HMGB1P32-201ENST00000425971 NLRP3Q96P20 1036 aa10.6□□□□□ -0.71
HMGB1P32-201ENST00000425971 CHMP3Q9Y3E7 222 aa10.6□□□□□ -0.71
HMGB1P32-201ENST00000425971 NOS2P35228 1153 aa10.59□□□□□ -0.71
HMGB1P32-201ENST00000425971 HPS1Q92902 700 aa10.59□□□□□ -0.71
HMGB1P32-201ENST00000425971 ASB16Q96NS5 453 aa10.59□□□□□ -0.71
HMGB1P32-201ENST00000425971 ZSCAN10Q96SZ4 725 aaPredicted RBP10.59□□□□□ -0.71
HMGB1P32-201ENST00000425971 ZNF395Q9H8N7 513 aaPredicted RBP10.59□□□□□ -0.71
HMGB1P32-201ENST00000425971 ANKRD33BA6NCL7 494 aa10.58□□□□□ -0.72
HMGB1P32-201ENST00000425971 GPC1P35052 558 aa10.58□□□□□ -0.72
HMGB1P32-201ENST00000425971 CABP1Q9NZU7 370 aa10.58□□□□□ -0.72
HMGB1P32-201ENST00000425971 LRFN2Q9ULH4 789 aa10.58□□□□□ -0.72
HMGB1P32-201ENST00000425971 NCAPD3P42695 1498 aa10.57□□□□□ -0.72
HMGB1P32-201ENST00000425971 MAPK1P28482 360 aa10.57□□□□□ -0.72
HMGB1P32-201ENST00000425971 GRIP2Q9C0E4 1043 aa10.57□□□□□ -0.72
HMGB1P32-201ENST00000425971 STIM2Q9P246 746 aa10.57□□□□□ -0.72
HMGB1P32-201ENST00000425971 KIF21AQ7Z4S6 1674 aa10.57□□□□□ -0.72
HMGB1P32-201ENST00000425971 SPINT1O43278 529 aa10.56□□□□□ -0.72
HMGB1P32-201ENST00000425971 RHBDD1Q8TEB9 315 aa10.56□□□□□ -0.72
HMGB1P32-201ENST00000425971 L3MBTL2Q969R5 705 aa10.56□□□□□ -0.72
HMGB1P32-201ENST00000425971 TSEN34Q9BSV6 310 aaKnown RBP10.56□□□□□ -0.72
HMGB1P32-201ENST00000425971 GFRA3O60609 400 aa10.55□□□□□ -0.72
HMGB1P32-201ENST00000425971 RNF144AP50876 292 aaPredicted RBP10.55□□□□□ -0.72
HMGB1P32-201ENST00000425971 RTN1Q16799 776 aa10.55□□□□□ -0.72
HMGB1P32-201ENST00000425971 ALDH16A1Q8IZ83 802 aa10.55□□□□□ -0.72
HMGB1P32-201ENST00000425971 NIFKQ9BYG3 293 aaKnown RBP10.55□□□□□ -0.72
HMGB1P32-201ENST00000425971 RBCK1Q9BYM8 510 aa10.55□□□□□ -0.72
HMGB1P32-201ENST00000425971 ZNF232Q9UNY5 417 aa10.55□□□□□ -0.72
HMGB1P32-201ENST00000425971 EIF1AXP47813 144 aaKnown RBP10.54□□□□□ -0.72
HMGB1P32-201ENST00000425971 TMEM214Q6NUQ4 689 aaKnown RBP10.54□□□□□ -0.72
HMGB1P32-201ENST00000425971 RGL4Q8IZJ4 473 aa10.54□□□□□ -0.72
HMGB1P32-201ENST00000425971 LINC00528Q8N1L1 170 aa10.54□□□□□ -0.72
HMGB1P32-201ENST00000425971 PDZRN3Q9UPQ7 1066 aa10.54□□□□□ -0.72
HMGB1P32-201ENST00000425971 PARP3Q9Y6F1 533 aa10.54□□□□□ -0.72
HMGB1P32-201ENST00000425971 DCAF1Q9Y4B6 1507 aa10.53□□□□□ -0.72
HMGB1P32-201ENST00000425971 UNCXA6NJT0 531 aa10.53□□□□□ -0.72
HMGB1P32-201ENST00000425971 FAM26DQ5JW98 314 aa10.53□□□□□ -0.72
HMGB1P32-201ENST00000425971 ALKBH2Q6NS38 261 aa10.53□□□□□ -0.72
HMGB1P32-201ENST00000425971 ABTB2Q8N961 1025 aa10.53□□□□□ -0.72
HMGB1P32-201ENST00000425971 NGLY1Q96IV0 654 aa10.53□□□□□ -0.72
HMGB1P32-201ENST00000425971 INSM2Q96T92 566 aaPredicted RBP10.53□□□□□ -0.72
HMGB1P32-201ENST00000425971 PHACTR1Q9C0D0 580 aa10.53□□□□□ -0.72
HMGB1P32-201ENST00000425971 HCN4Q9Y3Q4 1203 aa10.53□□□□□ -0.72
HMGB1P32-201ENST00000425971 FZD6O60353 706 aa10.52□□□□□ -0.73
HMGB1P32-201ENST00000425971 LAPTM4AQ15012 233 aa10.52□□□□□ -0.73
HMGB1P32-201ENST00000425971 ZSCAN29Q8IWY8 852 aaPredicted RBP10.52□□□□□ -0.73
HMGB1P32-201ENST00000425971 BCL2L13Q9BXK5 485 aa10.52□□□□□ -0.73
HMGB1P32-201ENST00000425971 ARHGEF11O15085 1522 aa10.52□□□□□ -0.73
HMGB1P32-201ENST00000425971 SPATA31C2B4DYI2 1134 aa10.51□□□□□ -0.73
HMGB1P32-201ENST00000425971 E9PSI1 815 aa10.51□□□□□ -0.73
HMGB1P32-201ENST00000425971 CAPN5O15484 640 aaPredicted RBP10.51□□□□□ -0.73
HMGB1P32-201ENST00000425971 ZNF16P17020 682 aaPredicted RBP10.51□□□□□ -0.73
HMGB1P32-201ENST00000425971 BRD2P25440 801 aaKnown RBP10.51□□□□□ -0.73
HMGB1P32-201ENST00000425971 C4orf17Q53FE4 359 aa10.51□□□□□ -0.73
HMGB1P32-201ENST00000425971 GNASQ5JWF2 1037 aa10.51□□□□□ -0.73
HMGB1P32-201ENST00000425971 SLC27A3Q5K4L6 730 aa10.51□□□□□ -0.73
HMGB1P32-201ENST00000425971 C1orf53Q5VUE5 145 aa10.51□□□□□ -0.73
HMGB1P32-201ENST00000425971 FBXO33Q7Z6M2 555 aa10.51□□□□□ -0.73
HMGB1P32-201ENST00000425971 ZCCHC6Q5VYS8 1495 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms