RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 FLIIQ13045 1269 aa10.54□□□□□ -0.72
RAB3GAP1-202ENST00000425393 FIGNL1Q6PIW4 674 aa10.54□□□□□ -0.72
RAB3GAP1-202ENST00000425393 ADAMTS19Q8TE59 1207 aa10.54□□□□□ -0.72
RAB3GAP1-202ENST00000425393 GDF2Q9UK05 429 aaPredicted RBP10.54□□□□□ -0.72
RAB3GAP1-202ENST00000425393 USP17L5A8MUK1 530 aa10.53□□□□□ -0.72
RAB3GAP1-202ENST00000425393 BMP4P12644 408 aa10.53□□□□□ -0.72
RAB3GAP1-202ENST00000425393 UBTFP17480 764 aaKnown RBP10.53□□□□□ -0.72
RAB3GAP1-202ENST00000425393 NBPF1Q3BBV0 1214 aa10.53□□□□□ -0.72
RAB3GAP1-202ENST00000425393 NLRP8Q86W28 1048 aa10.53□□□□□ -0.72
RAB3GAP1-202ENST00000425393 CTBSQ01459 385 aa10.52□□□□□ -0.73
RAB3GAP1-202ENST00000425393 DEPDC4Q8N2C3 294 aa10.52□□□□□ -0.73
RAB3GAP1-202ENST00000425393 GOLGA6L1Q8N7Z2 621 aa10.52□□□□□ -0.73
RAB3GAP1-202ENST00000425393 GALNT6Q8NCL4 622 aa10.52□□□□□ -0.73
RAB3GAP1-202ENST00000425393 DCAF5Q96JK2 942 aa10.52□□□□□ -0.73
RAB3GAP1-202ENST00000425393 ZCCHC2Q9C0B9 1178 aaKnown RBP10.52□□□□□ -0.73
RAB3GAP1-202ENST00000425393 PCDHGC4Q9Y5F7 938 aa10.52□□□□□ -0.73
RAB3GAP1-202ENST00000425393 PSME1Q06323 249 aa10.51□□□□□ -0.73
RAB3GAP1-202ENST00000425393 PLA2G4EQ3MJ16 856 aa10.51□□□□□ -0.73
RAB3GAP1-202ENST00000425393 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.51□□□□□ -0.73
RAB3GAP1-202ENST00000425393 ZNF358Q9NW07 568 aa10.51□□□□□ -0.73
RAB3GAP1-202ENST00000425393 ZDHHC3Q9NYG2 299 aa10.51□□□□□ -0.73
RAB3GAP1-202ENST00000425393 CABP1Q9NZU7 370 aa10.51□□□□□ -0.73
RAB3GAP1-202ENST00000425393 A0A1W2PNR3 127 aa10.5□□□□□ -0.73
RAB3GAP1-202ENST00000425393 BACH1O14867 736 aa10.5□□□□□ -0.73
RAB3GAP1-202ENST00000425393 SNRPNP63162 240 aaKnown RBP10.5□□□□□ -0.73
RAB3GAP1-202ENST00000425393 SLCO4C1Q6ZQN7 724 aa10.5□□□□□ -0.73
RAB3GAP1-202ENST00000425393 SCHIP1Q9P0W5 487 aaPredicted RBP10.5□□□□□ -0.73
RAB3GAP1-202ENST00000425393 DCDC2BA2VCK2 349 aa10.49□□□□□ -0.73
RAB3GAP1-202ENST00000425393 ATXN7O15265 892 aaPredicted RBP10.49□□□□□ -0.73
RAB3GAP1-202ENST00000425393 TATP17735 454 aaPredicted RBP10.49□□□□□ -0.73
RAB3GAP1-202ENST00000425393 EPHA4P54764 986 aa10.49□□□□□ -0.73
RAB3GAP1-202ENST00000425393 ARSJQ5FYB0 599 aaPredicted RBP10.49□□□□□ -0.73
RAB3GAP1-202ENST00000425393 EDARADDQ8WWZ3 215 aa10.49□□□□□ -0.73
RAB3GAP1-202ENST00000425393 UCN2Q96RP3 112 aa10.49□□□□□ -0.73
RAB3GAP1-202ENST00000425393 GGA1Q9UJY5 639 aa10.49□□□□□ -0.73
RAB3GAP1-202ENST00000425393 HCN2Q9UL51 889 aa10.49□□□□□ -0.73
RAB3GAP1-202ENST00000425393 PARP3Q9Y6F1 533 aa10.48□□□□□ -0.73
RAB3GAP1-202ENST00000425393 PLEKHM2Q8IWE5 1019 aa10.47□□□□□ -0.73
RAB3GAP1-202ENST00000425393 ZDHHC1Q8WTX9 485 aa10.47□□□□□ -0.73
RAB3GAP1-202ENST00000425393 ZIC5Q96T25 663 aa10.47□□□□□ -0.73
RAB3GAP1-202ENST00000425393 SPOCK3Q9BQ16 436 aa10.47□□□□□ -0.73
RAB3GAP1-202ENST00000425393 USP17L3A6NCW0 530 aa10.46□□□□□ -0.73
RAB3GAP1-202ENST00000425393 USP17L4A6NCW7 530 aa10.46□□□□□ -0.73
RAB3GAP1-202ENST00000425393 ARAFP10398 606 aa10.46□□□□□ -0.73
RAB3GAP1-202ENST00000425393 MAPTP10636 758 aaKnown RBP10.46□□□□□ -0.73
RAB3GAP1-202ENST00000425393 TXLNAP40222 546 aa10.46□□□□□ -0.73
RAB3GAP1-202ENST00000425393 TNP2Q05952 138 aa10.46□□□□□ -0.73
RAB3GAP1-202ENST00000425393 USP17L2Q6R6M4 530 aa10.46□□□□□ -0.73
RAB3GAP1-202ENST00000425393 USP17L1Q7RTZ2 530 aa10.46□□□□□ -0.73
RAB3GAP1-202ENST00000425393 KIAA1024Q9UPX6 916 aa10.46□□□□□ -0.73
RAB3GAP1-202ENST00000425393 ITGB2P05107 769 aa10.45□□□□□ -0.74
RAB3GAP1-202ENST00000425393 ALYREFQ86V81 257 aaKnown RBP10.45□□□□□ -0.74
RAB3GAP1-202ENST00000425393 TRIM50Q86XT4 487 aa10.45□□□□□ -0.74
RAB3GAP1-202ENST00000425393 SLC9A9Q8IVB4 645 aa10.45□□□□□ -0.74
RAB3GAP1-202ENST00000425393 MKL2Q9ULH7 1088 aa10.45□□□□□ -0.74
RAB3GAP1-202ENST00000425393 KHNYNO15037 678 aaKnown RBP10.44□□□□□ -0.74
RAB3GAP1-202ENST00000425393 FAM157BP0CG42 384 aa10.44□□□□□ -0.74
RAB3GAP1-202ENST00000425393 HOXB4P17483 251 aaPredicted RBP10.44□□□□□ -0.74
RAB3GAP1-202ENST00000425393 CD33P20138 364 aa10.44□□□□□ -0.74
RAB3GAP1-202ENST00000425393 FAM182BQ5T319 152 aa10.44□□□□□ -0.74
RAB3GAP1-202ENST00000425393 HDGFL1Q5TGJ6 251 aa10.44□□□□□ -0.74
RAB3GAP1-202ENST00000425393 TPCN2Q8NHX9 752 aa10.44□□□□□ -0.74
RAB3GAP1-202ENST00000425393 RRAGCQ9HB90 399 aa10.44□□□□□ -0.74
RAB3GAP1-202ENST00000425393 ATP9BO43861 1147 aa10.43□□□□□ -0.74
RAB3GAP1-202ENST00000425393 EPXP11678 715 aa10.43□□□□□ -0.74
RAB3GAP1-202ENST00000425393 CLDN10P78369 228 aa10.43□□□□□ -0.74
RAB3GAP1-202ENST00000425393 TEAD4Q15561 434 aa10.43□□□□□ -0.74
RAB3GAP1-202ENST00000425393 TBCELQ5QJ74 424 aa10.43□□□□□ -0.74
RAB3GAP1-202ENST00000425393 SAMD5Q5TGI4 173 aa10.43□□□□□ -0.74
RAB3GAP1-202ENST00000425393 BICDL1Q6ZP65 573 aa10.43□□□□□ -0.74
RAB3GAP1-202ENST00000425393 TNS4Q8IZW8 715 aa10.43□□□□□ -0.74
RAB3GAP1-202ENST00000425393 L3MBTL2Q969R5 705 aa10.43□□□□□ -0.74
RAB3GAP1-202ENST00000425393 NEURL1BA8MQ27 555 aa10.42□□□□□ -0.74
RAB3GAP1-202ENST00000425393 ADAM23O75077 832 aa10.42□□□□□ -0.74
RAB3GAP1-202ENST00000425393 AMPD1P23109 780 aa10.42□□□□□ -0.74
RAB3GAP1-202ENST00000425393 GJA3Q9Y6H8 435 aa10.42□□□□□ -0.74
RAB3GAP1-202ENST00000425393 PIK3R2O00459 728 aa10.41□□□□□ -0.74
RAB3GAP1-202ENST00000425393 ZBTB7BO15156 539 aaPredicted RBP10.41□□□□□ -0.74
RAB3GAP1-202ENST00000425393 NOS2P35228 1153 aa10.41□□□□□ -0.74
RAB3GAP1-202ENST00000425393 ATP1A2P50993 1020 aa10.41□□□□□ -0.74
RAB3GAP1-202ENST00000425393 CCDC102BQ68D86 513 aa10.41□□□□□ -0.74
RAB3GAP1-202ENST00000425393 EML1O00423 815 aa10.4□□□□□ -0.74
RAB3GAP1-202ENST00000425393 EFSO43281 561 aa10.4□□□□□ -0.74
RAB3GAP1-202ENST00000425393 ADH6P28332 368 aa10.4□□□□□ -0.74
RAB3GAP1-202ENST00000425393 AVENQ9NQS1 362 aaPredicted RBP10.4□□□□□ -0.74
RAB3GAP1-202ENST00000425393 KLF15Q9UIH9 416 aa10.4□□□□□ -0.74
RAB3GAP1-202ENST00000425393 COL8A1P27658 744 aa10.39□□□□□ -0.75
RAB3GAP1-202ENST00000425393 SH3PXD2AQ5TCZ1 1133 aa10.39□□□□□ -0.75
RAB3GAP1-202ENST00000425393 LINC00114Q6XXX2 140 aa10.39□□□□□ -0.75
RAB3GAP1-202ENST00000425393 FCHSD1Q86WN1 690 aa10.39□□□□□ -0.75
RAB3GAP1-202ENST00000425393 OGFOD1Q8N543 542 aa10.39□□□□□ -0.75
RAB3GAP1-202ENST00000425393 CLUAP1Q96AJ1 413 aa10.39□□□□□ -0.75
RAB3GAP1-202ENST00000425393 BTBD6Q96KE9 485 aa10.39□□□□□ -0.75
RAB3GAP1-202ENST00000425393 STRN4Q9NRL3 753 aa10.39□□□□□ -0.75
RAB3GAP1-202ENST00000425393 ZNF232Q9UNY5 417 aa10.39□□□□□ -0.75
RAB3GAP1-202ENST00000425393 PROCP04070 461 aa10.38□□□□□ -0.75
RAB3GAP1-202ENST00000425393 DGKGP49619 791 aa10.38□□□□□ -0.75
RAB3GAP1-202ENST00000425393 FNBP4Q8N3X1 1017 aaPredicted RBP10.38□□□□□ -0.75
RAB3GAP1-202ENST00000425393 MKRN1Q9UHC7 482 aaKnown RBP10.38□□□□□ -0.75
RAB3GAP1-202ENST00000425393 GTF3C3Q9Y5Q9 886 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms