RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 POLRMTO00411 1230 aaKnown RBP23.83■■□□□ 1.41
GPC1-203ENST00000425056 KCNA3P22001 575 aa23.83■■□□□ 1.41
GPC1-203ENST00000425056 TM4SF1P30408 202 aa23.83■■□□□ 1.41
GPC1-203ENST00000425056 USPL1Q5W0Q7 1092 aa23.83■■□□□ 1.41
GPC1-203ENST00000425056 IL17REQ8NFR9 667 aa23.83■■□□□ 1.41
GPC1-203ENST00000425056 TEFQ10587 303 aa23.82■■□□□ 1.4
GPC1-203ENST00000425056 TTC5Q8N0Z6 440 aa23.82■■□□□ 1.4
GPC1-203ENST00000425056 RSPH6AQ9H0K4 717 aa23.82■■□□□ 1.4
GPC1-203ENST00000425056 NARFQ9UHQ1 456 aa23.82■■□□□ 1.4
GPC1-203ENST00000425056 HEG1Q9ULI3 1381 aa23.8■■□□□ 1.4
GPC1-203ENST00000425056 FCHSD2O94868 740 aa23.8■■□□□ 1.4
GPC1-203ENST00000425056 PRKAR2BP31323 418 aa23.8■■□□□ 1.4
GPC1-203ENST00000425056 ZNF790Q6PG37 636 aa23.8■■□□□ 1.4
GPC1-203ENST00000425056 ZNF526Q8TF50 670 aaPredicted RBP23.8■■□□□ 1.4
GPC1-203ENST00000425056 SCN7AQ01118 1682 aa23.79■■□□□ 1.4
GPC1-203ENST00000425056 ZNF496Q96IT1 587 aaPredicted RBP23.79■■□□□ 1.4
GPC1-203ENST00000425056 STARD3NLO95772 234 aa23.78■■□□□ 1.4
GPC1-203ENST00000425056 PPP2R1AP30153 589 aa23.78■■□□□ 1.4
GPC1-203ENST00000425056 PHACTR3Q96KR7 559 aa23.78■■□□□ 1.4
GPC1-203ENST00000425056 PIM2Q9P1W9 311 aa23.78■■□□□ 1.4
GPC1-203ENST00000425056 DLEC1Q9Y238 1755 aa23.78■■□□□ 1.4
GPC1-203ENST00000425056 NFIXQ14938 502 aa23.77■■□□□ 1.4
GPC1-203ENST00000425056 BCL2L12Q9HB09 334 aa23.77■■□□□ 1.4
GPC1-203ENST00000425056 NUDCQ9Y266 331 aa23.77■■□□□ 1.4
GPC1-203ENST00000425056 EIF5P55010 431 aaKnown RBP23.76■■□□□ 1.39
GPC1-203ENST00000425056 ARHGAP27Q6ZUM4 889 aa23.76■■□□□ 1.39
GPC1-203ENST00000425056 CEP350Q5VT06 3117 aa23.76■■□□□ 1.39
GPC1-203ENST00000425056 CANXP27824 592 aaKnown RBP23.75■■□□□ 1.39
GPC1-203ENST00000425056 TEX13AQ9BXU3 409 aaPredicted RBP23.75■■□□□ 1.39
GPC1-203ENST00000425056 CHRNA5P30532 468 aa23.74■■□□□ 1.39
GPC1-203ENST00000425056 DALRD3Q5D0E6 543 aaKnown RBP23.74■■□□□ 1.39
GPC1-203ENST00000425056 U2AF1L5P0DN76 240 aaPredicted RBP23.73■■□□□ 1.39
GPC1-203ENST00000425056 U2AF1Q01081 240 aaKnown RBP eCLIP23.73■■□□□ 1.39
GPC1-203ENST00000425056 FMNL2Q96PY5 1086 aa23.73■■□□□ 1.39
GPC1-203ENST00000425056 A0A087WZG4 1122 aa23.72■■□□□ 1.39
GPC1-203ENST00000425056 BCORQ6W2J9 1755 aa23.71■■□□□ 1.39
GPC1-203ENST00000425056 KIF3CO14782 793 aa23.71■■□□□ 1.39
GPC1-203ENST00000425056 BTBD11A6QL63 1104 aa23.7■■□□□ 1.38
GPC1-203ENST00000425056 SERPINB2P05120 415 aa23.7■■□□□ 1.38
GPC1-203ENST00000425056 SBF1O95248 1867 aa23.7■■□□□ 1.38
GPC1-203ENST00000425056 IL6STP40189 918 aaPredicted RBP23.69■■□□□ 1.38
GPC1-203ENST00000425056 ANKRD31Q8N7Z5 1873 aa23.68■■□□□ 1.38
GPC1-203ENST00000425056 CARMIL3Q8ND23 1372 aa23.68■■□□□ 1.38
GPC1-203ENST00000425056 KCNQ3O43525 872 aa23.68■■□□□ 1.38
GPC1-203ENST00000425056 C9orf131Q5VYM1 1079 aa23.67■■□□□ 1.38
GPC1-203ENST00000425056 RTF1Q92541 710 aaKnown RBP23.67■■□□□ 1.38
GPC1-203ENST00000425056 DLG5Q8TDM6 1919 aa23.65■■□□□ 1.38
GPC1-203ENST00000425056 A1BGP04217 495 aa23.65■■□□□ 1.38
GPC1-203ENST00000425056 TBC1D9BQ66K14 1250 aa23.65■■□□□ 1.38
GPC1-203ENST00000425056 MCM10Q7L590 875 aa23.65■■□□□ 1.38
GPC1-203ENST00000425056 ZNF330Q9Y3S2 320 aaPredicted RBP23.65■■□□□ 1.38
GPC1-203ENST00000425056 HTATSF1O43719 755 aaKnown RBP23.64■■□□□ 1.37
GPC1-203ENST00000425056 HSPA6P17066 643 aa23.64■■□□□ 1.37
GPC1-203ENST00000425056 BICDL1Q6ZP65 573 aa23.64■■□□□ 1.37
GPC1-203ENST00000425056 TBC1D2BQ9UPU7 963 aa23.64■■□□□ 1.37
GPC1-203ENST00000425056 COL11A2P13942 1736 aaPredicted RBP23.64■■□□□ 1.37
GPC1-203ENST00000425056 LAMB4A4D0S4 1761 aa23.63■■□□□ 1.37
GPC1-203ENST00000425056 CAMTA2O94983 1202 aa23.62■■□□□ 1.37
GPC1-203ENST00000425056 RNF181Q9P0P0 153 aa23.62■■□□□ 1.37
GPC1-203ENST00000425056 USP16Q9Y5T5 823 aa23.62■■□□□ 1.37
GPC1-203ENST00000425056 TNRC6CQ9HCJ0 1690 aaKnown RBP23.61■■□□□ 1.37
GPC1-203ENST00000425056 DCTN1Q14203 1278 aa23.61■■□□□ 1.37
GPC1-203ENST00000425056 NPM2Q86SE8 214 aaKnown RBP23.61■■□□□ 1.37
GPC1-203ENST00000425056 C2CD5Q86YS7 1000 aa23.61■■□□□ 1.37
GPC1-203ENST00000425056 NMRK2Q9NPI5 230 aa23.61■■□□□ 1.37
GPC1-203ENST00000425056 SNRPA1P09661 255 aaKnown RBP23.6■■□□□ 1.37
GPC1-203ENST00000425056 TTLL6Q8N841 843 aa23.6■■□□□ 1.37
GPC1-203ENST00000425056 KDM3BQ7LBC6 1761 aa23.6■■□□□ 1.37
GPC1-203ENST00000425056 PRAMEF22A3QJZ6 481 aa23.59■■□□□ 1.37
GPC1-203ENST00000425056 H0YIN7 160 aa23.59■■□□□ 1.37
GPC1-203ENST00000425056 TOMM70O94826 608 aa23.59■■□□□ 1.37
GPC1-203ENST00000425056 PRR5LQ6MZQ0 368 aa23.59■■□□□ 1.37
GPC1-203ENST00000425056 DZIP3Q86Y13 1208 aaKnown RBP23.59■■□□□ 1.37
GPC1-203ENST00000425056 RASSF7Q02833 373 aa23.58■■□□□ 1.37
GPC1-203ENST00000425056 BRIP1Q9BX63 1249 aa23.58■■□□□ 1.37
GPC1-203ENST00000425056 PDZRN3Q9UPQ7 1066 aa23.58■■□□□ 1.37
GPC1-203ENST00000425056 TIAM2Q8IVF5 1701 aa23.58■■□□□ 1.37
GPC1-203ENST00000425056 ZC3H4Q9UPT8 1303 aaKnown RBP23.58■■□□□ 1.36
GPC1-203ENST00000425056 ARFGEF2Q9Y6D5 1785 aa23.56■■□□□ 1.36
GPC1-203ENST00000425056 PDE6BP35913 854 aa23.56■■□□□ 1.36
GPC1-203ENST00000425056 PIP4K2AP48426 406 aaPredicted RBP23.56■■□□□ 1.36
GPC1-203ENST00000425056 TAF7Q15545 349 aaPredicted RBP23.56■■□□□ 1.36
GPC1-203ENST00000425056 SETDB2Q96T68 719 aa23.56■■□□□ 1.36
GPC1-203ENST00000425056 KDM2BQ8NHM5 1336 aa23.56■■□□□ 1.36
GPC1-203ENST00000425056 CCDC88AQ3V6T2 1871 aa23.56■■□□□ 1.36
GPC1-203ENST00000425056 NEFMP07197 916 aa23.55■■□□□ 1.36
GPC1-203ENST00000425056 CNBD1Q8NA66 436 aa23.55■■□□□ 1.36
GPC1-203ENST00000425056 PLEKHF1Q96S99 279 aa23.55■■□□□ 1.36
GPC1-203ENST00000425056 LMNB1P20700 586 aa23.54■■□□□ 1.36
GPC1-203ENST00000425056 CLEC4GQ6UXB4 293 aa23.54■■□□□ 1.36
GPC1-203ENST00000425056 FER1L6Q2WGJ9 1857 aa23.53■■□□□ 1.36
GPC1-203ENST00000425056 RGL2O15211 777 aa23.53■■□□□ 1.36
GPC1-203ENST00000425056 PRELPP51888 382 aa23.53■■□□□ 1.36
GPC1-203ENST00000425056 CCDC24Q8N4L8 307 aa23.53■■□□□ 1.36
GPC1-203ENST00000425056 CACNA1SQ13698 1873 aa23.53■■□□□ 1.36
GPC1-203ENST00000425056 NBPF26B4DH59 902 aa23.52■■□□□ 1.36
GPC1-203ENST00000425056 NFKBIEO00221 500 aa23.52■■□□□ 1.36
GPC1-203ENST00000425056 NBPF10Q6P3W6 841 aaKnown RBP23.52■■□□□ 1.36
GPC1-203ENST00000425056 NBPF15Q8N660 670 aa23.52■■□□□ 1.36
GPC1-203ENST00000425056 RBM46Q8TBY0 533 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms