RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 VSIG10Q8N0Z9 540 aa21.37■■□□□ 1.01
SNHG17-205ENST00000424235 FMNL2Q96PY5 1086 aa21.37■■□□□ 1.01
SNHG17-205ENST00000424235 ZBTB1Q9Y2K1 713 aa21.37■■□□□ 1.01
SNHG17-205ENST00000424235 ZNF526Q8TF50 670 aaPredicted RBP21.36■■□□□ 1.01
SNHG17-205ENST00000424235 ZNF496Q96IT1 587 aaPredicted RBP21.36■■□□□ 1.01
SNHG17-205ENST00000424235 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
SNHG17-205ENST00000424235 ADAMTS7Q9UKP4 1686 aa21.36■■□□□ 1.01
SNHG17-205ENST00000424235 COL15A1P39059 1388 aa21.36■■□□□ 1.01
SNHG17-205ENST00000424235 C4AP0C0L4 1744 aa21.35■■□□□ 1.01
SNHG17-205ENST00000424235 SOS1Q07889 1333 aaPredicted RBP21.35■■□□□ 1.01
SNHG17-205ENST00000424235 DCTN1Q14203 1278 aa21.35■■□□□ 1.01
SNHG17-205ENST00000424235 FKBP8Q14318 412 aa21.35■■□□□ 1.01
SNHG17-205ENST00000424235 USPL1Q5W0Q7 1092 aa21.35■■□□□ 1.01
SNHG17-205ENST00000424235 GPBP1L1Q9HC44 474 aaPredicted RBP21.35■■□□□ 1.01
SNHG17-205ENST00000424235 MYH14Q7Z406 1995 aaKnown RBP21.35■■□□□ 1.01
SNHG17-205ENST00000424235 HEG1Q9ULI3 1381 aa21.35■■□□□ 1.01
SNHG17-205ENST00000424235 TEX13AQ9BXU3 409 aaPredicted RBP21.34■■□□□ 1.01
SNHG17-205ENST00000424235 CEMIPQ8WUJ3 1361 aa21.33■■□□□ 1
SNHG17-205ENST00000424235 A0A087WZG4 1122 aa21.31■■□□□ 1
SNHG17-205ENST00000424235 BCS1LQ9Y276 419 aa21.31■■□□□ 1
SNHG17-205ENST00000424235 A0A0G2JLW4 131 aa21.3■■□□□ 1
SNHG17-205ENST00000424235 KCNQ3O43525 872 aa21.3■■□□□ 1
SNHG17-205ENST00000424235 BICDL1Q6ZP65 573 aa21.3■■□□□ 1
SNHG17-205ENST00000424235 UBR2Q8IWV8 1755 aa21.3■■□□□ 1
SNHG17-205ENST00000424235 MYBBP1AQ9BQG0 1328 aaKnown RBP21.29■■□□□ 1
SNHG17-205ENST00000424235 NPHP1O15259 732 aa21.29■■□□□ 1
SNHG17-205ENST00000424235 HTATSF1O43719 755 aaKnown RBP21.29■■□□□ 1
SNHG17-205ENST00000424235 HSPA6P17066 643 aa21.29■■□□□ 1
SNHG17-205ENST00000424235 TGFB2P61812 414 aa21.29■■□□□ 1
SNHG17-205ENST00000424235 NARFQ9UHQ1 456 aa21.29■■□□□ 1
SNHG17-205ENST00000424235 C10orf71Q711Q0 1435 aa21.29■■□□□ 1
SNHG17-205ENST00000424235 DDR1Q08345 913 aa21.28■■□□□ 1
SNHG17-205ENST00000424235 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
SNHG17-205ENST00000424235 PXDNLA1KZ92 1463 aa21.27■■□□□ 1
SNHG17-205ENST00000424235 DPEP1P16444 411 aa21.27■■□□□ 1
SNHG17-205ENST00000424235 NFE2L2Q16236 605 aa21.27■■□□□ 1
SNHG17-205ENST00000424235 SIPA1L3O60292 1781 aaPredicted RBP21.26■□□□□ 0.99
SNHG17-205ENST00000424235 A1BGP04217 495 aa21.26■□□□□ 0.99
SNHG17-205ENST00000424235 TAF7Q15545 349 aaPredicted RBP21.26■□□□□ 0.99
SNHG17-205ENST00000424235 MIS18AQ9NYP9 233 aa21.26■□□□□ 0.99
SNHG17-205ENST00000424235 SNRPA1P09661 255 aaKnown RBP21.25■□□□□ 0.99
SNHG17-205ENST00000424235 TBC1D2BQ9UPU7 963 aa21.25■□□□□ 0.99
SNHG17-205ENST00000424235 POLRMTO00411 1230 aaKnown RBP21.24■□□□□ 0.99
SNHG17-205ENST00000424235 PIP4K2AP48426 406 aaPredicted RBP21.24■□□□□ 0.99
SNHG17-205ENST00000424235 NFIXQ14938 502 aa21.24■□□□□ 0.99
SNHG17-205ENST00000424235 THUMPD2Q9BTF0 503 aaKnown RBP21.24■□□□□ 0.99
SNHG17-205ENST00000424235 IL6STP40189 918 aaPredicted RBP21.23■□□□□ 0.99
SNHG17-205ENST00000424235 EIF5P55010 431 aaKnown RBP21.23■□□□□ 0.99
SNHG17-205ENST00000424235 PNISRQ8TF01 805 aaKnown RBP21.23■□□□□ 0.99
SNHG17-205ENST00000424235 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
SNHG17-205ENST00000424235 KIAA1551Q9HCM1 1747 aa21.22■□□□□ 0.99
SNHG17-205ENST00000424235 ARHGAP27Q6ZUM4 889 aa21.22■□□□□ 0.99
SNHG17-205ENST00000424235 CCDC146Q8IYE0 955 aa21.22■□□□□ 0.99
SNHG17-205ENST00000424235 PLEKHF1Q96S99 279 aa21.22■□□□□ 0.99
SNHG17-205ENST00000424235 PRAMEF22A3QJZ6 481 aa21.21■□□□□ 0.99
SNHG17-205ENST00000424235 KIF3CO14782 793 aa21.21■□□□□ 0.99
SNHG17-205ENST00000424235 SERPINB2P05120 415 aa21.21■□□□□ 0.99
SNHG17-205ENST00000424235 TM4SF1P30408 202 aa21.21■□□□□ 0.99
SNHG17-205ENST00000424235 RIPK4P57078 832 aa21.21■□□□□ 0.99
SNHG17-205ENST00000424235 NEUROD2Q15784 382 aa21.21■□□□□ 0.99
SNHG17-205ENST00000424235 DZIP3Q86Y13 1208 aaKnown RBP21.21■□□□□ 0.99
SNHG17-205ENST00000424235 PIM2Q9P1W9 311 aa21.21■□□□□ 0.99
SNHG17-205ENST00000424235 USP16Q9Y5T5 823 aa21.21■□□□□ 0.99
SNHG17-205ENST00000424235 CHRNA5P30532 468 aa21.2■□□□□ 0.98
SNHG17-205ENST00000424235 KIF13BQ9NQT8 1826 aa21.2■□□□□ 0.98
SNHG17-205ENST00000424235 LMOD3Q0VAK6 560 aa21.19■□□□□ 0.98
SNHG17-205ENST00000424235 DALRD3Q5D0E6 543 aaKnown RBP21.19■□□□□ 0.98
SNHG17-205ENST00000424235 TBC1D9BQ66K14 1250 aa21.18■□□□□ 0.98
SNHG17-205ENST00000424235 BCL2L12Q9HB09 334 aa21.18■□□□□ 0.98
SNHG17-205ENST00000424235 RRP7AQ9Y3A4 280 aaKnown RBP21.18■□□□□ 0.98
SNHG17-205ENST00000424235 NGEFQ8N5V2 710 aa21.17■□□□□ 0.98
SNHG17-205ENST00000424235 SETDB2Q96T68 719 aa21.17■□□□□ 0.98
SNHG17-205ENST00000424235 TSPYL4Q9UJ04 414 aa21.17■□□□□ 0.98
SNHG17-205ENST00000424235 ZNF652Q9Y2D9 606 aa21.17■□□□□ 0.98
SNHG17-205ENST00000424235 DLG5Q8TDM6 1919 aa21.16■□□□□ 0.98
SNHG17-205ENST00000424235 CARMIL3Q8ND23 1372 aa21.15■□□□□ 0.98
SNHG17-205ENST00000424235 C2CD5Q86YS7 1000 aa21.15■□□□□ 0.98
SNHG17-205ENST00000424235 CAMTA2O94983 1202 aa21.14■□□□□ 0.97
SNHG17-205ENST00000424235 CCDC24Q8N4L8 307 aa21.14■□□□□ 0.97
SNHG17-205ENST00000424235 CNBD1Q8NA66 436 aa21.14■□□□□ 0.97
SNHG17-205ENST00000424235 PRKRIP1Q9H875 184 aaPredicted RBP21.14■□□□□ 0.97
SNHG17-205ENST00000424235 LAS1LQ9Y4W2 734 aaKnown RBP21.14■□□□□ 0.97
SNHG17-205ENST00000424235 SCN7AQ01118 1682 aa21.14■□□□□ 0.97
SNHG17-205ENST00000424235 H0YIN7 160 aa21.13■□□□□ 0.97
SNHG17-205ENST00000424235 TMPOP42166 694 aaKnown RBP21.13■□□□□ 0.97
SNHG17-205ENST00000424235 ST5P78524 1137 aa21.13■□□□□ 0.97
SNHG17-205ENST00000424235 ZNF622Q969S3 477 aaKnown RBP eCLIP21.12■□□□□ 0.97
SNHG17-205ENST00000424235 RUNDC1Q96C34 613 aa21.12■□□□□ 0.97
SNHG17-205ENST00000424235 FAM177BA6PVY3 158 aa21.11■□□□□ 0.97
SNHG17-205ENST00000424235 MYL6BP14649 208 aa21.11■□□□□ 0.97
SNHG17-205ENST00000424235 KCNA3P22001 575 aa21.11■□□□□ 0.97
SNHG17-205ENST00000424235 EIF4A1P60842 406 aaKnown RBP21.11■□□□□ 0.97
SNHG17-205ENST00000424235 KIF6Q6ZMV9 814 aa21.11■□□□□ 0.97
SNHG17-205ENST00000424235 NBPF5PQ86XG9 351 aaPredicted RBP21.11■□□□□ 0.97
SNHG17-205ENST00000424235 BRCA1P38398 1863 aaKnown RBP21.11■□□□□ 0.97
SNHG17-205ENST00000424235 PDE6BP35913 854 aa21.1■□□□□ 0.97
SNHG17-205ENST00000424235 ADAMTS8Q9UP79 889 aa21.1■□□□□ 0.97
SNHG17-205ENST00000424235 AFDNP55196 1824 aaKnown RBP21.09■□□□□ 0.97
SNHG17-205ENST00000424235 NBPF26B4DH59 902 aa21.09■□□□□ 0.97
SNHG17-205ENST00000424235 EIF2S2P20042 333 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms