RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 TM4SF1P30408 202 aa25.23■■□□□ 1.63
AC004540.1-203ENST00000421862 SLC39A6Q13433 755 aa25.23■■□□□ 1.63
AC004540.1-203ENST00000421862 CC2D1BQ5T0F9 858 aaKnown RBP25.23■■□□□ 1.63
AC004540.1-203ENST00000421862 VSIG10Q8N0Z9 540 aa25.23■■□□□ 1.63
AC004540.1-203ENST00000421862 ANKRD31Q8N7Z5 1873 aa25.23■■□□□ 1.63
AC004540.1-203ENST00000421862 BCORQ6W2J9 1755 aa25.22■■□□□ 1.63
AC004540.1-203ENST00000421862 USPL1Q5W0Q7 1092 aa25.21■■□□□ 1.63
AC004540.1-203ENST00000421862 ZBTB1Q9Y2K1 713 aa25.21■■□□□ 1.63
AC004540.1-203ENST00000421862 PIM2Q9P1W9 311 aa25.2■■□□□ 1.62
AC004540.1-203ENST00000421862 TIAM2Q8IVF5 1701 aa25.2■■□□□ 1.62
AC004540.1-203ENST00000421862 ARHGAP27Q6ZUM4 889 aa25.19■■□□□ 1.62
AC004540.1-203ENST00000421862 NARFQ9UHQ1 456 aa25.19■■□□□ 1.62
AC004540.1-203ENST00000421862 COL11A2P13942 1736 aaPredicted RBP25.18■■□□□ 1.62
AC004540.1-203ENST00000421862 WDR90Q96KV7 1748 aa25.18■■□□□ 1.62
AC004540.1-203ENST00000421862 ZPR1O75312 459 aa25.18■■□□□ 1.62
AC004540.1-203ENST00000421862 CCDC88AQ3V6T2 1871 aa25.17■■□□□ 1.62
AC004540.1-203ENST00000421862 DALRD3Q5D0E6 543 aaKnown RBP25.16■■□□□ 1.62
AC004540.1-203ENST00000421862 BCL2L12Q9HB09 334 aa25.16■■□□□ 1.62
AC004540.1-203ENST00000421862 CHRNA5P30532 468 aa25.15■■□□□ 1.62
AC004540.1-203ENST00000421862 NFIXQ14938 502 aa25.15■■□□□ 1.62
AC004540.1-203ENST00000421862 CEMIPQ8WUJ3 1361 aa25.15■■□□□ 1.62
AC004540.1-203ENST00000421862 ARFGEF2Q9Y6D5 1785 aa25.14■■□□□ 1.62
AC004540.1-203ENST00000421862 C9orf131Q5VYM1 1079 aa25.13■■□□□ 1.61
AC004540.1-203ENST00000421862 GAS2L2Q8NHY3 880 aa25.13■■□□□ 1.61
AC004540.1-203ENST00000421862 HEG1Q9ULI3 1381 aa25.13■■□□□ 1.61
AC004540.1-203ENST00000421862 TOMM70O94826 608 aa25.12■■□□□ 1.61
AC004540.1-203ENST00000421862 NMRK2Q9NPI5 230 aa25.12■■□□□ 1.61
AC004540.1-203ENST00000421862 CARMIL3Q8ND23 1372 aa25.12■■□□□ 1.61
AC004540.1-203ENST00000421862 DICER1Q9UPY3 1922 aaKnown RBP25.12■■□□□ 1.61
AC004540.1-203ENST00000421862 EIF5P55010 431 aaKnown RBP25.11■■□□□ 1.61
AC004540.1-203ENST00000421862 TTC5Q8N0Z6 440 aa25.11■■□□□ 1.61
AC004540.1-203ENST00000421862 IL17REQ8NFR9 667 aa25.11■■□□□ 1.61
AC004540.1-203ENST00000421862 FER1L6Q2WGJ9 1857 aa25.11■■□□□ 1.61
AC004540.1-203ENST00000421862 GNAT3A8MTJ3 354 aa25.1■■□□□ 1.61
AC004540.1-203ENST00000421862 ZNF496Q96IT1 587 aaPredicted RBP25.1■■□□□ 1.61
AC004540.1-203ENST00000421862 CACNA1SQ13698 1873 aa25.1■■□□□ 1.61
AC004540.1-203ENST00000421862 U2SURPO15042 1029 aaKnown RBP25.09■■□□□ 1.61
AC004540.1-203ENST00000421862 ZNF790Q6PG37 636 aa25.09■■□□□ 1.61
AC004540.1-203ENST00000421862 LAMB4A4D0S4 1761 aa25.08■■□□□ 1.61
AC004540.1-203ENST00000421862 STARD3NLO95772 234 aa25.08■■□□□ 1.61
AC004540.1-203ENST00000421862 TEFQ10587 303 aa25.08■■□□□ 1.61
AC004540.1-203ENST00000421862 SERPINB2P05120 415 aa25.07■■□□□ 1.6
AC004540.1-203ENST00000421862 CANXP27824 592 aaKnown RBP25.07■■□□□ 1.6
AC004540.1-203ENST00000421862 RNF181Q9P0P0 153 aa25.07■■□□□ 1.6
AC004540.1-203ENST00000421862 ZC3H4Q9UPT8 1303 aaKnown RBP25.07■■□□□ 1.6
AC004540.1-203ENST00000421862 RSPH6AQ9H0K4 717 aa25.06■■□□□ 1.6
AC004540.1-203ENST00000421862 DLG5Q8TDM6 1919 aa25.06■■□□□ 1.6
AC004540.1-203ENST00000421862 A0A087WZG4 1122 aa25.05■■□□□ 1.6
AC004540.1-203ENST00000421862 APLP1P51693 650 aa25.05■■□□□ 1.6
AC004540.1-203ENST00000421862 TEX13AQ9BXU3 409 aaPredicted RBP25.05■■□□□ 1.6
AC004540.1-203ENST00000421862 RBM46Q8TBY0 533 aaKnown RBP25.04■■□□□ 1.6
AC004540.1-203ENST00000421862 KDM2BQ8NHM5 1336 aa25.04■■□□□ 1.6
AC004540.1-203ENST00000421862 PRKAR2BP31323 418 aa25.02■■□□□ 1.6
AC004540.1-203ENST00000421862 IL6STP40189 918 aaPredicted RBP25.02■■□□□ 1.6
AC004540.1-203ENST00000421862 RASSF7Q02833 373 aa25.02■■□□□ 1.6
AC004540.1-203ENST00000421862 PHACTR3Q96KR7 559 aa25.02■■□□□ 1.6
AC004540.1-203ENST00000421862 FMNL2Q96PY5 1086 aa25.02■■□□□ 1.6
AC004540.1-203ENST00000421862 KDM3BQ7LBC6 1761 aa25.01■■□□□ 1.59
AC004540.1-203ENST00000421862 PRELPP51888 382 aa25■■□□□ 1.59
AC004540.1-203ENST00000421862 CNGB1Q14028 1251 aaPredicted RBP25■■□□□ 1.59
AC004540.1-203ENST00000421862 TBC1D9BQ66K14 1250 aa25■■□□□ 1.59
AC004540.1-203ENST00000421862 TTLL6Q8N841 843 aa25■■□□□ 1.59
AC004540.1-203ENST00000421862 CFAP53Q96M91 514 aa25■■□□□ 1.59
AC004540.1-203ENST00000421862 C2CD5Q86YS7 1000 aa24.99■■□□□ 1.59
AC004540.1-203ENST00000421862 SLX4Q8IY92 1834 aa24.98■■□□□ 1.59
AC004540.1-203ENST00000421862 IFFO2Q5TF58 517 aa24.98■■□□□ 1.59
AC004540.1-203ENST00000421862 LMNB1P20700 586 aa24.97■■□□□ 1.59
AC004540.1-203ENST00000421862 FSTL1Q12841 308 aa24.97■■□□□ 1.59
AC004540.1-203ENST00000421862 PRR5LQ6MZQ0 368 aa24.97■■□□□ 1.59
AC004540.1-203ENST00000421862 BICDL1Q6ZP65 573 aa24.97■■□□□ 1.59
AC004540.1-203ENST00000421862 DNAJC5GQ8N7S2 189 aa24.97■■□□□ 1.59
AC004540.1-203ENST00000421862 PDZRN3Q9UPQ7 1066 aa24.97■■□□□ 1.59
AC004540.1-203ENST00000421862 H0YIN7 160 aa24.96■■□□□ 1.59
AC004540.1-203ENST00000421862 NFKBIEO00221 500 aa24.96■■□□□ 1.59
AC004540.1-203ENST00000421862 KCNQ3O43525 872 aa24.96■■□□□ 1.59
AC004540.1-203ENST00000421862 CAMTA2O94983 1202 aa24.96■■□□□ 1.59
AC004540.1-203ENST00000421862 BTBD11A6QL63 1104 aa24.95■■□□□ 1.58
AC004540.1-203ENST00000421862 A1BGP04217 495 aa24.95■■□□□ 1.58
AC004540.1-203ENST00000421862 PPP2R1AP30153 589 aa24.95■■□□□ 1.58
AC004540.1-203ENST00000421862 C16orf71Q8IYS4 520 aaPredicted RBP24.95■■□□□ 1.58
AC004540.1-203ENST00000421862 BRIP1Q9BX63 1249 aa24.95■■□□□ 1.58
AC004540.1-203ENST00000421862 TBC1D2BQ9UPU7 963 aa24.95■■□□□ 1.58
AC004540.1-203ENST00000421862 NUDCQ9Y266 331 aa24.94■■□□□ 1.58
AC004540.1-203ENST00000421862 ZNF330Q9Y3S2 320 aaPredicted RBP24.93■■□□□ 1.58
AC004540.1-203ENST00000421862 PDE6BP35913 854 aa24.92■■□□□ 1.58
AC004540.1-203ENST00000421862 RRAGCQ9HB90 399 aa24.92■■□□□ 1.58
AC004540.1-203ENST00000421862 GLTPD2A6NH11 291 aa24.91■■□□□ 1.58
AC004540.1-203ENST00000421862 U2AF1L5P0DN76 240 aaPredicted RBP24.9■■□□□ 1.58
AC004540.1-203ENST00000421862 U2AF1Q01081 240 aaKnown RBP eCLIP24.9■■□□□ 1.58
AC004540.1-203ENST00000421862 DZIP3Q86Y13 1208 aaKnown RBP24.9■■□□□ 1.58
AC004540.1-203ENST00000421862 USP16Q9Y5T5 823 aa24.9■■□□□ 1.58
AC004540.1-203ENST00000421862 LTBP3Q9NS15 1303 aa24.89■■□□□ 1.58
AC004540.1-203ENST00000421862 NUP98P52948 1817 aa24.89■■□□□ 1.58
AC004540.1-203ENST00000421862 MCM10Q7L590 875 aa24.89■■□□□ 1.58
AC004540.1-203ENST00000421862 CNBD1Q8NA66 436 aa24.89■■□□□ 1.58
AC004540.1-203ENST00000421862 PRAMEF22A3QJZ6 481 aa24.88■■□□□ 1.57
AC004540.1-203ENST00000421862 HTATSF1O43719 755 aaKnown RBP24.88■■□□□ 1.57
AC004540.1-203ENST00000421862 SETDB2Q96T68 719 aa24.88■■□□□ 1.57
AC004540.1-203ENST00000421862 RGL2O15211 777 aa24.87■■□□□ 1.57
AC004540.1-203ENST00000421862 SNRPA1P09661 255 aaKnown RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms