RNA–Protein interactions for RNA: ENST00000420638.2

NBEAP3-201, Transcript of neurobeachin pseudogene 3, humanhuman

BASIC

Gene NBEAP3, Length 1,493 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBEAP3-201ENST00000420638 NLGN2Q8NFZ4 835 aa16.48■□□□□ 0.23
NBEAP3-201ENST00000420638 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
NBEAP3-201ENST00000420638 MMP10P09238 476 aa16.48■□□□□ 0.23
NBEAP3-201ENST00000420638 SOS1Q07889 1333 aaPredicted RBP16.47■□□□□ 0.23
NBEAP3-201ENST00000420638 TAF7Q15545 349 aaPredicted RBP16.47■□□□□ 0.23
NBEAP3-201ENST00000420638 ADAMTS8Q9UP79 889 aa16.47■□□□□ 0.23
NBEAP3-201ENST00000420638 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
NBEAP3-201ENST00000420638 KCNQ3O43525 872 aa16.46■□□□□ 0.23
NBEAP3-201ENST00000420638 GPR162Q16538 588 aa16.46■□□□□ 0.23
NBEAP3-201ENST00000420638 SRP68Q9UHB9 627 aaKnown RBP16.46■□□□□ 0.23
NBEAP3-201ENST00000420638 ZPR1O75312 459 aa16.45■□□□□ 0.22
NBEAP3-201ENST00000420638 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
NBEAP3-201ENST00000420638 COL15A1P39059 1388 aa16.45■□□□□ 0.22
NBEAP3-201ENST00000420638 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
NBEAP3-201ENST00000420638 FKBP8Q14318 412 aa16.43■□□□□ 0.22
NBEAP3-201ENST00000420638 CCDC146Q8IYE0 955 aa16.43■□□□□ 0.22
NBEAP3-201ENST00000420638 PNISRQ8TF01 805 aaKnown RBP16.43■□□□□ 0.22
NBEAP3-201ENST00000420638 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
NBEAP3-201ENST00000420638 PARP3Q9Y6F1 533 aa16.43■□□□□ 0.22
NBEAP3-201ENST00000420638 SNRPA1P09661 255 aaKnown RBP16.42■□□□□ 0.22
NBEAP3-201ENST00000420638 YY1P25490 414 aa16.42■□□□□ 0.22
NBEAP3-201ENST00000420638 EIF5P55010 431 aaKnown RBP16.42■□□□□ 0.22
NBEAP3-201ENST00000420638 USPL1Q5W0Q7 1092 aa16.42■□□□□ 0.22
NBEAP3-201ENST00000420638 PELP1Q8IZL8 1130 aaKnown RBP16.42■□□□□ 0.22
NBEAP3-201ENST00000420638 A0A087WZG4 1122 aa16.42■□□□□ 0.22
NBEAP3-201ENST00000420638 IL6STP40189 918 aaPredicted RBP16.42■□□□□ 0.22
NBEAP3-201ENST00000420638 RIPK4P57078 832 aa16.42■□□□□ 0.22
NBEAP3-201ENST00000420638 MRS2Q9HD23 443 aa16.42■□□□□ 0.22
NBEAP3-201ENST00000420638 TMPOP42166 694 aaKnown RBP16.41■□□□□ 0.22
NBEAP3-201ENST00000420638 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
NBEAP3-201ENST00000420638 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
NBEAP3-201ENST00000420638 KIF13BQ9NQT8 1826 aa16.4■□□□□ 0.22
NBEAP3-201ENST00000420638 GRIN3BO60391 1043 aa16.4■□□□□ 0.22
NBEAP3-201ENST00000420638 A1BGP04217 495 aa16.4■□□□□ 0.22
NBEAP3-201ENST00000420638 TM4SF1P30408 202 aa16.4■□□□□ 0.22
NBEAP3-201ENST00000420638 LMOD3Q0VAK6 560 aa16.4■□□□□ 0.22
NBEAP3-201ENST00000420638 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
NBEAP3-201ENST00000420638 RUNDC1Q96C34 613 aa16.4■□□□□ 0.22
NBEAP3-201ENST00000420638 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
NBEAP3-201ENST00000420638 CHD4Q14839 1912 aa16.4■□□□□ 0.22
NBEAP3-201ENST00000420638 TGFB2P61812 414 aa16.39■□□□□ 0.21
NBEAP3-201ENST00000420638 BCORQ6W2J9 1755 aa16.39■□□□□ 0.21
NBEAP3-201ENST00000420638 SCN7AQ01118 1682 aa16.38■□□□□ 0.21
NBEAP3-201ENST00000420638 C10orf71Q711Q0 1435 aa16.38■□□□□ 0.21
NBEAP3-201ENST00000420638 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
NBEAP3-201ENST00000420638 YBX3P16989 372 aaKnown RBP eCLIP16.38■□□□□ 0.21
NBEAP3-201ENST00000420638 DDR1Q08345 913 aa16.38■□□□□ 0.21
NBEAP3-201ENST00000420638 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
NBEAP3-201ENST00000420638 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
NBEAP3-201ENST00000420638 POLRMTO00411 1230 aaKnown RBP16.37■□□□□ 0.21
NBEAP3-201ENST00000420638 EIF4A1P60842 406 aaKnown RBP16.36■□□□□ 0.21
NBEAP3-201ENST00000420638 NFIXQ14938 502 aa16.36■□□□□ 0.21
NBEAP3-201ENST00000420638 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
NBEAP3-201ENST00000420638 TBC1D2BQ9UPU7 963 aa16.36■□□□□ 0.21
NBEAP3-201ENST00000420638 RRP7AQ9Y3A4 280 aaKnown RBP16.36■□□□□ 0.21
NBEAP3-201ENST00000420638 PXDNLA1KZ92 1463 aa16.36■□□□□ 0.21
NBEAP3-201ENST00000420638 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
NBEAP3-201ENST00000420638 BABAM1Q9NWV8 329 aa16.35■□□□□ 0.21
NBEAP3-201ENST00000420638 KIAA1551Q9HCM1 1747 aa16.35■□□□□ 0.21
NBEAP3-201ENST00000420638 GIGYF1O75420 1035 aaPredicted RBP16.35■□□□□ 0.21
NBEAP3-201ENST00000420638 A0A0G2JLW4 131 aa16.34■□□□□ 0.21
NBEAP3-201ENST00000420638 PIP4K2AP48426 406 aaPredicted RBP16.34■□□□□ 0.21
NBEAP3-201ENST00000420638 DIEXFQ68CQ4 756 aaKnown RBP16.34■□□□□ 0.21
NBEAP3-201ENST00000420638 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
NBEAP3-201ENST00000420638 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
NBEAP3-201ENST00000420638 N4BP2Q86UW6 1770 aaPredicted RBP16.34■□□□□ 0.21
NBEAP3-201ENST00000420638 NBPF26B4DH59 902 aa16.33■□□□□ 0.2
NBEAP3-201ENST00000420638 APAF1O14727 1248 aa16.33■□□□□ 0.2
NBEAP3-201ENST00000420638 CAMTA2O94983 1202 aa16.33■□□□□ 0.2
NBEAP3-201ENST00000420638 SERPINB2P05120 415 aa16.33■□□□□ 0.2
NBEAP3-201ENST00000420638 NBPF10Q6P3W6 841 aaKnown RBP16.33■□□□□ 0.2
NBEAP3-201ENST00000420638 NBPF15Q8N660 670 aa16.33■□□□□ 0.2
NBEAP3-201ENST00000420638 AFDNP55196 1824 aaKnown RBP16.32■□□□□ 0.2
NBEAP3-201ENST00000420638 DPEP1P16444 411 aa16.32■□□□□ 0.2
NBEAP3-201ENST00000420638 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
NBEAP3-201ENST00000420638 NRXN2Q9P2S2 1712 aa16.32■□□□□ 0.2
NBEAP3-201ENST00000420638 TBC1D9BQ66K14 1250 aa16.31■□□□□ 0.2
NBEAP3-201ENST00000420638 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
NBEAP3-201ENST00000420638 CCER2I3L3R5 266 aa16.3■□□□□ 0.2
NBEAP3-201ENST00000420638 KCNA3P22001 575 aa16.3■□□□□ 0.2
NBEAP3-201ENST00000420638 CLEC4GQ6UXB4 293 aa16.3■□□□□ 0.2
NBEAP3-201ENST00000420638 RGL2O15211 777 aa16.29■□□□□ 0.2
NBEAP3-201ENST00000420638 SETDB2Q96T68 719 aa16.29■□□□□ 0.2
NBEAP3-201ENST00000420638 PIM2Q9P1W9 311 aa16.29■□□□□ 0.2
NBEAP3-201ENST00000420638 BCS1LQ9Y276 419 aa16.29■□□□□ 0.2
NBEAP3-201ENST00000420638 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
NBEAP3-201ENST00000420638 CARMIL3Q8ND23 1372 aa16.29■□□□□ 0.2
NBEAP3-201ENST00000420638 CHL1O00533 1208 aa16.29■□□□□ 0.2
NBEAP3-201ENST00000420638 ZNF652Q9Y2D9 606 aa16.29■□□□□ 0.2
NBEAP3-201ENST00000420638 ERBB4Q15303 1308 aa16.27■□□□□ 0.2
NBEAP3-201ENST00000420638 CHRNA5P30532 468 aa16.27■□□□□ 0.19
NBEAP3-201ENST00000420638 MIER1Q8N108 512 aa16.27■□□□□ 0.19
NBEAP3-201ENST00000420638 ZNF784Q8NCA9 323 aaPredicted RBP16.27■□□□□ 0.19
NBEAP3-201ENST00000420638 LAS1LQ9Y4W2 734 aaKnown RBP16.27■□□□□ 0.19
NBEAP3-201ENST00000420638 ANKRD36CQ5JPF3 1778 aa16.27■□□□□ 0.19
NBEAP3-201ENST00000420638 NUP98P52948 1817 aa16.26■□□□□ 0.19
NBEAP3-201ENST00000420638 FAM9BQ8IZU0 186 aa16.26■□□□□ 0.19
NBEAP3-201ENST00000420638 CFAP44Q96MT7 982 aa16.26■□□□□ 0.19
NBEAP3-201ENST00000420638 SENP3-EIF4A1A0A087X0R7 540 aa16.25■□□□□ 0.19
NBEAP3-201ENST00000420638 MYL6BP14649 208 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms