RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 RGPD1P0DJD0 1748 aa10.89□□□□□ -0.67
SP140-204ENST00000417495 ZKSCAN8Q15776 578 aaPredicted RBP10.89□□□□□ -0.67
SP140-204ENST00000417495 TMTC2Q8N394 836 aa10.89□□□□□ -0.67
SP140-204ENST00000417495 MPNDQ8N594 471 aa10.89□□□□□ -0.67
SP140-204ENST00000417495 PHOX2BQ99453 314 aa10.89□□□□□ -0.67
SP140-204ENST00000417495 PHRF1Q9P1Y6 1649 aaKnown RBP10.89□□□□□ -0.67
SP140-204ENST00000417495 DUSP27Q5VZP5 1158 aa10.89□□□□□ -0.67
SP140-204ENST00000417495 NOL8Q76FK4 1167 aaKnown RBP10.89□□□□□ -0.67
SP140-204ENST00000417495 ERBB4Q15303 1308 aa10.89□□□□□ -0.67
SP140-204ENST00000417495 KIF24Q5T7B8 1368 aa10.89□□□□□ -0.67
SP140-204ENST00000417495 PPIP5K1Q6PFW1 1433 aa10.88□□□□□ -0.67
SP140-204ENST00000417495 MRE11P49959 708 aa10.88□□□□□ -0.67
SP140-204ENST00000417495 TBC1D2BQ9UPU7 963 aa10.88□□□□□ -0.67
SP140-204ENST00000417495 USP31Q70CQ4 1352 aa10.88□□□□□ -0.67
SP140-204ENST00000417495 CCDC172P0C7W6 258 aa10.88□□□□□ -0.67
SP140-204ENST00000417495 HSP90AB4PQ58FF6 505 aa10.88□□□□□ -0.67
SP140-204ENST00000417495 ZNF467Q7Z7K2 595 aaPredicted RBP10.88□□□□□ -0.67
SP140-204ENST00000417495 RNF217Q8TC41 542 aa10.88□□□□□ -0.67
SP140-204ENST00000417495 BACH2Q9BYV9 841 aa10.88□□□□□ -0.67
SP140-204ENST00000417495 EID1Q9Y6B2 187 aa10.88□□□□□ -0.67
SP140-204ENST00000417495 PTPRUQ92729 1446 aa10.88□□□□□ -0.67
SP140-204ENST00000417495 MYH16Q9H6N6 1097 aa10.87□□□□□ -0.67
SP140-204ENST00000417495 ABL2P42684 1182 aa10.87□□□□□ -0.67
SP140-204ENST00000417495 DRC1Q96MC2 740 aa10.87□□□□□ -0.67
SP140-204ENST00000417495 TIGD1Q96MW7 591 aa10.87□□□□□ -0.67
SP140-204ENST00000417495 NCAPGQ9BPX3 1015 aa10.87□□□□□ -0.67
SP140-204ENST00000417495 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.87□□□□□ -0.67
SP140-204ENST00000417495 MAP2P11137 1827 aaKnown RBP10.87□□□□□ -0.67
SP140-204ENST00000417495 NUTM2FA1L443 756 aa10.87□□□□□ -0.67
SP140-204ENST00000417495 FYB1O15117 783 aa10.87□□□□□ -0.67
SP140-204ENST00000417495 PDE4AP27815 886 aa10.87□□□□□ -0.67
SP140-204ENST00000417495 SREK1Q8WXA9 508 aaKnown RBP10.87□□□□□ -0.67
SP140-204ENST00000417495 GPATCH3Q96I76 525 aa10.87□□□□□ -0.67
SP140-204ENST00000417495 CABP2Q9NPB3 220 aa10.87□□□□□ -0.67
SP140-204ENST00000417495 TRIM6-TRIM34B2RNG4 842 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 ARID4AP29374 1257 aaPredicted RBP10.86□□□□□ -0.67
SP140-204ENST00000417495 SCNN1AP37088 669 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 EP400NLQ6ZTU2 488 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 EFCAB3Q8N7B9 438 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 TRIM34Q9BYJ4 488 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 KIF3AQ9Y496 699 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 ROBO2Q9HCK4 1378 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 OVOS2A0A0J9YW53 1432 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 OVOS2Q6IE36 1432 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 RAB11FIP3O75154 756 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.86□□□□□ -0.67
SP140-204ENST00000417495 CCDC61Q9Y6R9 512 aa10.86□□□□□ -0.67
SP140-204ENST00000417495 MST1RQ04912 1400 aa10.85□□□□□ -0.67
SP140-204ENST00000417495 TTC21AQ8NDW8 1320 aa10.85□□□□□ -0.67
SP140-204ENST00000417495 CT47A1Q5JQC4 288 aaPredicted RBP10.85□□□□□ -0.67
SP140-204ENST00000417495 SMC4Q9NTJ3 1288 aa10.85□□□□□ -0.67
SP140-204ENST00000417495 FARP1Q9Y4F1 1045 aaPredicted RBP10.85□□□□□ -0.67
SP140-204ENST00000417495 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
SP140-204ENST00000417495 CCDC96Q2M329 555 aa10.85□□□□□ -0.67
SP140-204ENST00000417495 ZC3H4Q9UPT8 1303 aaKnown RBP10.84□□□□□ -0.67
SP140-204ENST00000417495 TSHZ1Q6ZSZ6 1077 aa10.84□□□□□ -0.67
SP140-204ENST00000417495 MARF1Q9Y4F3 1742 aaKnown RBP10.84□□□□□ -0.67
SP140-204ENST00000417495 UQCRHLA0A096LP55 91 aa10.84□□□□□ -0.67
SP140-204ENST00000417495 UQCRHP07919 91 aa10.84□□□□□ -0.67
SP140-204ENST00000417495 CTR9Q6PD62 1173 aa10.84□□□□□ -0.67
SP140-204ENST00000417495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.84□□□□□ -0.67
SP140-204ENST00000417495 MICAL1Q8TDZ2 1067 aa10.84□□□□□ -0.67
SP140-204ENST00000417495 GIPC2Q8TF65 315 aa10.83□□□□□ -0.68
SP140-204ENST00000417495 VTI1AQ96AJ9 217 aa10.83□□□□□ -0.68
SP140-204ENST00000417495 USP6P35125 1406 aa10.83□□□□□ -0.68
SP140-204ENST00000417495 NCOA3Q9Y6Q9 1424 aa10.83□□□□□ -0.68
SP140-204ENST00000417495 MTHFSP49914 203 aa10.83□□□□□ -0.68
SP140-204ENST00000417495 PLEKHF1Q96S99 279 aa10.83□□□□□ -0.68
SP140-204ENST00000417495 ANKRD13AQ8IZ07 590 aa10.82□□□□□ -0.68
SP140-204ENST00000417495 KIF16BQ96L93 1317 aa10.82□□□□□ -0.68
SP140-204ENST00000417495 FCHSD2O94868 740 aa10.82□□□□□ -0.68
SP140-204ENST00000417495 LTKP29376 864 aa10.82□□□□□ -0.68
SP140-204ENST00000417495 RINLQ6ZS11 566 aa10.82□□□□□ -0.68
SP140-204ENST00000417495 NUDT16Q96DE0 195 aaKnown RBP10.82□□□□□ -0.68
SP140-204ENST00000417495 USTQ9Y2C2 406 aa10.82□□□□□ -0.68
SP140-204ENST00000417495 RIPOR2Q9Y4F9 1068 aa10.82□□□□□ -0.68
SP140-204ENST00000417495 KIF1AQ12756 1690 aa10.82□□□□□ -0.68
SP140-204ENST00000417495 LMTK3Q96Q04 1460 aa10.81□□□□□ -0.68
SP140-204ENST00000417495 KIF1CO43896 1103 aaKnown RBP10.81□□□□□ -0.68
SP140-204ENST00000417495 PDE3AQ14432 1141 aa10.81□□□□□ -0.68
SP140-204ENST00000417495 STK26Q9P289 416 aa10.81□□□□□ -0.68
SP140-204ENST00000417495 GRXCR2A6NFK2 248 aa10.81□□□□□ -0.68
SP140-204ENST00000417495 PRIM1P49642 420 aaKnown RBP10.81□□□□□ -0.68
SP140-204ENST00000417495 MLECQ14165 292 aa10.81□□□□□ -0.68
SP140-204ENST00000417495 ZSCAN30Q86W11 494 aa10.8□□□□□ -0.68
SP140-204ENST00000417495 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
SP140-204ENST00000417495 PANK2Q9BZ23 570 aa10.8□□□□□ -0.68
SP140-204ENST00000417495 CABP1Q9NZU7 370 aa10.8□□□□□ -0.68
SP140-204ENST00000417495 PLEKHG2Q9H7P9 1386 aa10.8□□□□□ -0.68
SP140-204ENST00000417495 NUTM2DQ5VT03 806 aaPredicted RBP10.8□□□□□ -0.68
SP140-204ENST00000417495 ZBTB9Q96C00 473 aa10.8□□□□□ -0.68
SP140-204ENST00000417495 SGSM3Q96HU1 749 aa10.8□□□□□ -0.68
SP140-204ENST00000417495 BRMS1Q9HCU9 246 aa10.8□□□□□ -0.68
SP140-204ENST00000417495 PPME1Q9Y570 386 aa10.8□□□□□ -0.68
SP140-204ENST00000417495 CSB-PGBD3P0DP91 1061 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 CAPN2P17655 700 aa10.79□□□□□ -0.68
SP140-204ENST00000417495 ZNF771Q7L3S4 317 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms