RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 KIF3CO14782 793 aa16.79■□□□□ 0.28
NCKIPSD-203ENST00000415281 U2SURPO15042 1029 aaKnown RBP16.79■□□□□ 0.28
NCKIPSD-203ENST00000415281 ZNF526Q8TF50 670 aaPredicted RBP16.79■□□□□ 0.28
NCKIPSD-203ENST00000415281 RSPH6AQ9H0K4 717 aa16.79■□□□□ 0.28
NCKIPSD-203ENST00000415281 NARFQ9UHQ1 456 aa16.79■□□□□ 0.28
NCKIPSD-203ENST00000415281 CEMIPQ8WUJ3 1361 aa16.78■□□□□ 0.28
NCKIPSD-203ENST00000415281 KCNQ3O43525 872 aa16.78■□□□□ 0.28
NCKIPSD-203ENST00000415281 CHRNA5P30532 468 aa16.78■□□□□ 0.28
NCKIPSD-203ENST00000415281 EIF5P55010 431 aaKnown RBP16.78■□□□□ 0.28
NCKIPSD-203ENST00000415281 NFIXQ14938 502 aa16.78■□□□□ 0.28
NCKIPSD-203ENST00000415281 ZNF496Q96IT1 587 aaPredicted RBP16.78■□□□□ 0.28
NCKIPSD-203ENST00000415281 SBF1O95248 1867 aa16.78■□□□□ 0.28
NCKIPSD-203ENST00000415281 GNAT3A8MTJ3 354 aa16.77■□□□□ 0.28
NCKIPSD-203ENST00000415281 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
NCKIPSD-203ENST00000415281 GPBP1L1Q9HC44 474 aaPredicted RBP16.77■□□□□ 0.28
NCKIPSD-203ENST00000415281 COL15A1P39059 1388 aa16.77■□□□□ 0.27
NCKIPSD-203ENST00000415281 FCHSD2O94868 740 aa16.76■□□□□ 0.27
NCKIPSD-203ENST00000415281 DLEC1Q9Y238 1755 aa16.75■□□□□ 0.27
NCKIPSD-203ENST00000415281 ZNF790Q6PG37 636 aa16.75■□□□□ 0.27
NCKIPSD-203ENST00000415281 ARHGAP27Q6ZUM4 889 aa16.75■□□□□ 0.27
NCKIPSD-203ENST00000415281 ANKRD31Q8N7Z5 1873 aa16.75■□□□□ 0.27
NCKIPSD-203ENST00000415281 HEG1Q9ULI3 1381 aa16.75■□□□□ 0.27
NCKIPSD-203ENST00000415281 CANXP27824 592 aaKnown RBP16.74■□□□□ 0.27
NCKIPSD-203ENST00000415281 PRKAR2BP31323 418 aa16.74■□□□□ 0.27
NCKIPSD-203ENST00000415281 PRELPP51888 382 aa16.74■□□□□ 0.27
NCKIPSD-203ENST00000415281 PIM2Q9P1W9 311 aa16.74■□□□□ 0.27
NCKIPSD-203ENST00000415281 ZPR1O75312 459 aa16.73■□□□□ 0.27
NCKIPSD-203ENST00000415281 GAS2L2Q8NHY3 880 aa16.73■□□□□ 0.27
NCKIPSD-203ENST00000415281 CARMIL3Q8ND23 1372 aa16.73■□□□□ 0.27
NCKIPSD-203ENST00000415281 PRAMEF22A3QJZ6 481 aa16.72■□□□□ 0.27
NCKIPSD-203ENST00000415281 A1BGP04217 495 aa16.72■□□□□ 0.27
NCKIPSD-203ENST00000415281 SERPINB2P05120 415 aa16.72■□□□□ 0.27
NCKIPSD-203ENST00000415281 USP16Q9Y5T5 823 aa16.71■□□□□ 0.27
NCKIPSD-203ENST00000415281 SCN7AQ01118 1682 aa16.71■□□□□ 0.27
NCKIPSD-203ENST00000415281 TEFQ10587 303 aa16.7■□□□□ 0.26
NCKIPSD-203ENST00000415281 DALRD3Q5D0E6 543 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-203ENST00000415281 TBC1D9BQ66K14 1250 aa16.7■□□□□ 0.26
NCKIPSD-203ENST00000415281 DLG5Q8TDM6 1919 aa16.69■□□□□ 0.26
NCKIPSD-203ENST00000415281 DCTN1Q14203 1278 aa16.69■□□□□ 0.26
NCKIPSD-203ENST00000415281 C9orf131Q5VYM1 1079 aa16.69■□□□□ 0.26
NCKIPSD-203ENST00000415281 NMRK2Q9NPI5 230 aa16.69■□□□□ 0.26
NCKIPSD-203ENST00000415281 TBC1D2BQ9UPU7 963 aa16.69■□□□□ 0.26
NCKIPSD-203ENST00000415281 CCDC88AQ3V6T2 1871 aa16.68■□□□□ 0.26
NCKIPSD-203ENST00000415281 STARD3NLO95772 234 aa16.68■□□□□ 0.26
NCKIPSD-203ENST00000415281 MCM10Q7L590 875 aa16.68■□□□□ 0.26
NCKIPSD-203ENST00000415281 TTC5Q8N0Z6 440 aa16.68■□□□□ 0.26
NCKIPSD-203ENST00000415281 COL11A2P13942 1736 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-203ENST00000415281 BCORQ6W2J9 1755 aa16.67■□□□□ 0.26
NCKIPSD-203ENST00000415281 BTBD11A6QL63 1104 aa16.67■□□□□ 0.26
NCKIPSD-203ENST00000415281 HSPA6P17066 643 aa16.67■□□□□ 0.26
NCKIPSD-203ENST00000415281 IL6STP40189 918 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-203ENST00000415281 PIP4K2AP48426 406 aaPredicted RBP16.67■□□□□ 0.26
NCKIPSD-203ENST00000415281 FMNL2Q96PY5 1086 aa16.67■□□□□ 0.26
NCKIPSD-203ENST00000415281 CAMTA2O94983 1202 aa16.66■□□□□ 0.26
NCKIPSD-203ENST00000415281 U2AF1L5P0DN76 240 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-203ENST00000415281 U2AF1Q01081 240 aaKnown RBP eCLIP16.66■□□□□ 0.26
NCKIPSD-203ENST00000415281 BICDL1Q6ZP65 573 aa16.66■□□□□ 0.26
NCKIPSD-203ENST00000415281 CCDC24Q8N4L8 307 aa16.66■□□□□ 0.26
NCKIPSD-203ENST00000415281 CFAP53Q96M91 514 aa16.66■□□□□ 0.26
NCKIPSD-203ENST00000415281 TEX13AQ9BXU3 409 aaPredicted RBP16.66■□□□□ 0.26
NCKIPSD-203ENST00000415281 NBPF26B4DH59 902 aa16.65■□□□□ 0.26
NCKIPSD-203ENST00000415281 RASSF7Q02833 373 aa16.65■□□□□ 0.26
NCKIPSD-203ENST00000415281 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
NCKIPSD-203ENST00000415281 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
NCKIPSD-203ENST00000415281 PLEKHF1Q96S99 279 aa16.65■□□□□ 0.26
NCKIPSD-203ENST00000415281 PRR5LQ6MZQ0 368 aa16.64■□□□□ 0.25
NCKIPSD-203ENST00000415281 A0A087WZG4 1122 aa16.63■□□□□ 0.25
NCKIPSD-203ENST00000415281 C2CD5Q86YS7 1000 aa16.63■□□□□ 0.25
NCKIPSD-203ENST00000415281 MIS18AQ9NYP9 233 aa16.63■□□□□ 0.25
NCKIPSD-203ENST00000415281 RNF181Q9P0P0 153 aa16.63■□□□□ 0.25
NCKIPSD-203ENST00000415281 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
NCKIPSD-203ENST00000415281 KDM3BQ7LBC6 1761 aa16.62■□□□□ 0.25
NCKIPSD-203ENST00000415281 NFKBIEO00221 500 aa16.62■□□□□ 0.25
NCKIPSD-203ENST00000415281 TOMM70O94826 608 aa16.62■□□□□ 0.25
NCKIPSD-203ENST00000415281 DNAJC5GQ8N7S2 189 aa16.62■□□□□ 0.25
NCKIPSD-203ENST00000415281 FER1L6Q2WGJ9 1857 aa16.62■□□□□ 0.25
NCKIPSD-203ENST00000415281 SLX4Q8IY92 1834 aa16.61■□□□□ 0.25
NCKIPSD-203ENST00000415281 HTATSF1O43719 755 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-203ENST00000415281 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
NCKIPSD-203ENST00000415281 TTLL6Q8N841 843 aa16.61■□□□□ 0.25
NCKIPSD-203ENST00000415281 BRIP1Q9BX63 1249 aa16.61■□□□□ 0.25
NCKIPSD-203ENST00000415281 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-203ENST00000415281 CACNA1SQ13698 1873 aa16.59■□□□□ 0.25
NCKIPSD-203ENST00000415281 H0YIN7 160 aa16.59■□□□□ 0.25
NCKIPSD-203ENST00000415281 SNRPA1P09661 255 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-203ENST00000415281 TAF7Q15545 349 aaPredicted RBP16.59■□□□□ 0.25
NCKIPSD-203ENST00000415281 DZIP3Q86Y13 1208 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-203ENST00000415281 RRAGCQ9HB90 399 aa16.59■□□□□ 0.25
NCKIPSD-203ENST00000415281 DICER1Q9UPY3 1922 aaKnown RBP16.58■□□□□ 0.25
NCKIPSD-203ENST00000415281 POTECB2RU33 542 aa16.58■□□□□ 0.24
NCKIPSD-203ENST00000415281 TIAM2Q8IVF5 1701 aa16.58■□□□□ 0.24
NCKIPSD-203ENST00000415281 ARFGEF2Q9Y6D5 1785 aa16.58■□□□□ 0.24
NCKIPSD-203ENST00000415281 LAMB4A4D0S4 1761 aa16.57■□□□□ 0.24
NCKIPSD-203ENST00000415281 TNRC6CQ9HCJ0 1690 aaKnown RBP16.57■□□□□ 0.24
NCKIPSD-203ENST00000415281 HLFQ16534 295 aa16.57■□□□□ 0.24
NCKIPSD-203ENST00000415281 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
NCKIPSD-203ENST00000415281 SRGNP10124 158 aa16.56■□□□□ 0.24
NCKIPSD-203ENST00000415281 RBM46Q8TBY0 533 aaKnown RBP16.56■□□□□ 0.24
NCKIPSD-203ENST00000415281 C7orf43Q8WVR3 580 aa16.56■□□□□ 0.24
NCKIPSD-203ENST00000415281 SETDB2Q96T68 719 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms