RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 LINC00116Q8NCU8 138 aa16.89■□□□□ 0.29
CNOT4-204ENST00000414802 LRRC4BQ9NT99 713 aa16.89■□□□□ 0.29
CNOT4-204ENST00000414802 PLSCR1O15162 318 aa16.88■□□□□ 0.29
CNOT4-204ENST00000414802 ANXA1P04083 346 aa16.88■□□□□ 0.29
CNOT4-204ENST00000414802 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
CNOT4-204ENST00000414802 C4AP0C0L4 1744 aa16.88■□□□□ 0.29
CNOT4-204ENST00000414802 EZH2Q15910 746 aaKnown RBP16.88■□□□□ 0.29
CNOT4-204ENST00000414802 PROM2Q8N271 834 aa16.88■□□□□ 0.29
CNOT4-204ENST00000414802 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
CNOT4-204ENST00000414802 SOS1Q07889 1333 aaPredicted RBP16.87■□□□□ 0.29
CNOT4-204ENST00000414802 A1BGP04217 495 aa16.87■□□□□ 0.29
CNOT4-204ENST00000414802 CYP19A1P11511 503 aaPredicted RBP16.87■□□□□ 0.29
CNOT4-204ENST00000414802 BAG6P46379 1132 aa16.87■□□□□ 0.29
CNOT4-204ENST00000414802 PROSER3Q2NL68 480 aa16.87■□□□□ 0.29
CNOT4-204ENST00000414802 UPF1Q92900 1129 aaKnown RBP eCLIP16.87■□□□□ 0.29
CNOT4-204ENST00000414802 CHPF2Q9P2E5 772 aa16.87■□□□□ 0.29
CNOT4-204ENST00000414802 CT47B1P0C2W7 299 aaPredicted RBP16.86■□□□□ 0.29
CNOT4-204ENST00000414802 RARSP54136 660 aaKnown RBP16.86■□□□□ 0.29
CNOT4-204ENST00000414802 SSH1Q8WYL5 1049 aa16.86■□□□□ 0.29
CNOT4-204ENST00000414802 CAMKK2Q96RR4 588 aa16.86■□□□□ 0.29
CNOT4-204ENST00000414802 ARFGEF2Q9Y6D5 1785 aa16.86■□□□□ 0.29
CNOT4-204ENST00000414802 CENPBP07199 599 aaPredicted RBP16.85■□□□□ 0.29
CNOT4-204ENST00000414802 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
CNOT4-204ENST00000414802 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
CNOT4-204ENST00000414802 SMC4Q9NTJ3 1288 aa16.85■□□□□ 0.29
CNOT4-204ENST00000414802 RCAN3Q9UKA8 241 aa16.85■□□□□ 0.29
CNOT4-204ENST00000414802 ZBTB1Q9Y2K1 713 aa16.85■□□□□ 0.29
CNOT4-204ENST00000414802 BCORQ6W2J9 1755 aa16.85■□□□□ 0.29
CNOT4-204ENST00000414802 BCAR3O75815 825 aa16.85■□□□□ 0.29
CNOT4-204ENST00000414802 STARD3NLO95772 234 aa16.85■□□□□ 0.29
CNOT4-204ENST00000414802 MYL6BP14649 208 aa16.85■□□□□ 0.29
CNOT4-204ENST00000414802 SLC27A3Q5K4L6 730 aa16.85■□□□□ 0.29
CNOT4-204ENST00000414802 TEX13AQ9BXU3 409 aaPredicted RBP16.85■□□□□ 0.29
CNOT4-204ENST00000414802 NBPF26B4DH59 902 aa16.84■□□□□ 0.29
CNOT4-204ENST00000414802 ADRA2BP18089 450 aa16.84■□□□□ 0.29
CNOT4-204ENST00000414802 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
CNOT4-204ENST00000414802 PDIA6Q15084 440 aa16.84■□□□□ 0.29
CNOT4-204ENST00000414802 NBPF14Q5TI25 921 aa16.84■□□□□ 0.29
CNOT4-204ENST00000414802 NBPF10Q6P3W6 841 aaKnown RBP16.84■□□□□ 0.29
CNOT4-204ENST00000414802 NBPF15Q8N660 670 aa16.84■□□□□ 0.29
CNOT4-204ENST00000414802 STK31Q9BXU1 1019 aa16.84■□□□□ 0.29
CNOT4-204ENST00000414802 NUP98P52948 1817 aa16.84■□□□□ 0.29
CNOT4-204ENST00000414802 CCDC125Q86Z20 511 aa16.83■□□□□ 0.28
CNOT4-204ENST00000414802 MRPL50Q8N5N7 158 aaKnown RBP16.83■□□□□ 0.28
CNOT4-204ENST00000414802 CCDC87Q9NVE4 849 aa16.83■□□□□ 0.28
CNOT4-204ENST00000414802 ZNF330Q9Y3S2 320 aaPredicted RBP16.83■□□□□ 0.28
CNOT4-204ENST00000414802 QSER1Q2KHR3 1735 aa16.83■□□□□ 0.28
CNOT4-204ENST00000414802 CNTNAP4Q9C0A0 1308 aa16.82■□□□□ 0.28
CNOT4-204ENST00000414802 ALDH1L2Q3SY69 923 aa16.82■□□□□ 0.28
CNOT4-204ENST00000414802 INTS5Q6P9B9 1019 aaKnown RBP16.82■□□□□ 0.28
CNOT4-204ENST00000414802 SMIM5Q71RC9 77 aa16.82■□□□□ 0.28
CNOT4-204ENST00000414802 G2E3Q7L622 706 aa16.82■□□□□ 0.28
CNOT4-204ENST00000414802 AFDNP55196 1824 aaKnown RBP16.82■□□□□ 0.28
CNOT4-204ENST00000414802 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
CNOT4-204ENST00000414802 DDX21Q9NR30 783 aaKnown RBP eCLIP16.81■□□□□ 0.28
CNOT4-204ENST00000414802 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
CNOT4-204ENST00000414802 ANKRD36CQ5JPF3 1778 aa16.81■□□□□ 0.28
CNOT4-204ENST00000414802 N4BP2Q86UW6 1770 aaPredicted RBP16.81■□□□□ 0.28
CNOT4-204ENST00000414802 ERBB4Q15303 1308 aa16.81■□□□□ 0.28
CNOT4-204ENST00000414802 ZNF428Q96B54 188 aa16.81■□□□□ 0.28
CNOT4-204ENST00000414802 PHAXQ9H814 394 aaKnown RBP16.81■□□□□ 0.28
CNOT4-204ENST00000414802 DBF4Q9UBU7 674 aaPredicted RBP16.81■□□□□ 0.28
CNOT4-204ENST00000414802 GNPATO15228 680 aa16.8■□□□□ 0.28
CNOT4-204ENST00000414802 ZNF827Q17R98 1081 aa16.8■□□□□ 0.28
CNOT4-204ENST00000414802 AMIGO3Q86WK7 504 aa16.8■□□□□ 0.28
CNOT4-204ENST00000414802 AK7Q96M32 723 aa16.8■□□□□ 0.28
CNOT4-204ENST00000414802 LRP10Q7Z4F1 713 aa16.79■□□□□ 0.28
CNOT4-204ENST00000414802 ANO8Q9HCE9 1232 aaPredicted RBP16.79■□□□□ 0.28
CNOT4-204ENST00000414802 COL15A1P39059 1388 aa16.78■□□□□ 0.28
CNOT4-204ENST00000414802 AIMP1Q12904 312 aaKnown RBP16.78■□□□□ 0.28
CNOT4-204ENST00000414802 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
CNOT4-204ENST00000414802 XAGE3Q8WTP9 111 aa16.78■□□□□ 0.28
CNOT4-204ENST00000414802 FRAT1Q92837 279 aaPredicted RBP16.78■□□□□ 0.28
CNOT4-204ENST00000414802 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
CNOT4-204ENST00000414802 HYPKQ9NX55 129 aa16.78■□□□□ 0.28
CNOT4-204ENST00000414802 PLIN1O60240 522 aa16.77■□□□□ 0.28
CNOT4-204ENST00000414802 PHF14O94880 888 aa16.77■□□□□ 0.28
CNOT4-204ENST00000414802 FLIIQ13045 1269 aa16.77■□□□□ 0.28
CNOT4-204ENST00000414802 NOB1Q9ULX3 412 aaKnown RBP16.77■□□□□ 0.28
CNOT4-204ENST00000414802 TNNQ9UQP3 1299 aa16.77■□□□□ 0.28
CNOT4-204ENST00000414802 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
CNOT4-204ENST00000414802 TTLL7Q6ZT98 887 aa16.76■□□□□ 0.27
CNOT4-204ENST00000414802 AKT1S1Q96B36 256 aa16.76■□□□□ 0.27
CNOT4-204ENST00000414802 KIF16BQ96L93 1317 aa16.76■□□□□ 0.27
CNOT4-204ENST00000414802 EIF5P55010 431 aaKnown RBP16.75■□□□□ 0.27
CNOT4-204ENST00000414802 COPS6Q7L5N1 327 aa16.75■□□□□ 0.27
CNOT4-204ENST00000414802 ARXQ96QS3 562 aa16.75■□□□□ 0.27
CNOT4-204ENST00000414802 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
CNOT4-204ENST00000414802 RPS6KA4O75676 772 aa16.75■□□□□ 0.27
CNOT4-204ENST00000414802 FKBP5Q13451 457 aaPredicted RBP16.75■□□□□ 0.27
CNOT4-204ENST00000414802 RTCBQ9Y3I0 505 aaKnown RBP16.75■□□□□ 0.27
CNOT4-204ENST00000414802 RRP1P56182 461 aaKnown RBP16.74■□□□□ 0.27
CNOT4-204ENST00000414802 ADCY9O60503 1353 aa16.74■□□□□ 0.27
CNOT4-204ENST00000414802 BRPF1P55201 1214 aaPredicted RBP16.73■□□□□ 0.27
CNOT4-204ENST00000414802 ZBTB3Q9H5J0 574 aa16.73■□□□□ 0.27
CNOT4-204ENST00000414802 STK32BQ9NY57 414 aa16.73■□□□□ 0.27
CNOT4-204ENST00000414802 TFCP2L1Q9NZI6 479 aa16.73■□□□□ 0.27
CNOT4-204ENST00000414802 TBC1D2BQ9UPU7 963 aa16.73■□□□□ 0.27
CNOT4-204ENST00000414802 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.72■□□□□ 0.27
CNOT4-204ENST00000414802 F6X3S4 739 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms