RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 COX20Q5RI15 118 aa11.16□□□□□ -0.62
SMC4P1-201ENST00000414479 TMC7Q7Z402 723 aa11.16□□□□□ -0.62
SMC4P1-201ENST00000414479 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
SMC4P1-201ENST00000414479 SAP130Q9H0E3 1048 aa11.16□□□□□ -0.62
SMC4P1-201ENST00000414479 USP5P45974 858 aa11.15□□□□□ -0.62
SMC4P1-201ENST00000414479 TEAD4Q15561 434 aa11.15□□□□□ -0.62
SMC4P1-201ENST00000414479 CABP1Q9NZU7 370 aa11.15□□□□□ -0.62
SMC4P1-201ENST00000414479 TREHO43280 583 aa11.14□□□□□ -0.63
SMC4P1-201ENST00000414479 ATP2B2Q01814 1243 aa11.14□□□□□ -0.63
SMC4P1-201ENST00000414479 POTEAQ6S8J7 498 aa11.14□□□□□ -0.63
SMC4P1-201ENST00000414479 NGLY1Q96IV0 654 aa11.14□□□□□ -0.63
SMC4P1-201ENST00000414479 QTRT2Q9H974 415 aaKnown RBP11.14□□□□□ -0.63
SMC4P1-201ENST00000414479 PCSK2P16519 638 aa11.13□□□□□ -0.63
SMC4P1-201ENST00000414479 HIF1AQ16665 826 aa11.13□□□□□ -0.63
SMC4P1-201ENST00000414479 RTN1Q16799 776 aa11.13□□□□□ -0.63
SMC4P1-201ENST00000414479 IQSEC3Q9UPP2 1182 aaPredicted RBP11.13□□□□□ -0.63
SMC4P1-201ENST00000414479 MEN1O00255 615 aa11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 TNFRSF10BO14763 440 aa11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 NOS2P35228 1153 aa11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 PTGIRP43119 386 aa11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 FMR1Q06787 632 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 ZNF697Q5TEC3 545 aa11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 IFFO2Q5TF58 517 aa11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 SPRYD7Q5W111 196 aa11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 TMEM214Q6NUQ4 689 aaKnown RBP11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 SNIP1Q8TAD8 396 aaKnown RBP11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 ZSCAN10Q96SZ4 725 aaPredicted RBP11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 NIFKQ9BYG3 293 aaKnown RBP11.12□□□□□ -0.63
SMC4P1-201ENST00000414479 EML1O00423 815 aa11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 P4HBP07237 508 aaKnown RBP11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 XPCQ01831 940 aaPredicted RBP11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 PLCB3Q01970 1234 aa11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 CENPCQ03188 943 aa11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 C11orf91Q3C1V1 193 aa11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 Q6ZVU0 165 aa11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 ALDH16A1Q8IZ83 802 aa11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 FAM13BQ9NYF5 915 aa11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 HRH3Q9Y5N1 445 aa11.11□□□□□ -0.63
SMC4P1-201ENST00000414479 FZD6O60353 706 aa11.1□□□□□ -0.63
SMC4P1-201ENST00000414479 ZIC2O95409 532 aaPredicted RBP11.1□□□□□ -0.63
SMC4P1-201ENST00000414479 PPARGC1BQ86YN6 1023 aaKnown RBP11.1□□□□□ -0.63
SMC4P1-201ENST00000414479 TTC16Q8NEE8 873 aa11.1□□□□□ -0.63
SMC4P1-201ENST00000414479 L3MBTL2Q969R5 705 aa11.1□□□□□ -0.63
SMC4P1-201ENST00000414479 MRS2Q9HD23 443 aa11.1□□□□□ -0.63
SMC4P1-201ENST00000414479 MAPK8P45983 427 aa11.09□□□□□ -0.63
SMC4P1-201ENST00000414479 GNASQ5JWF2 1037 aa11.09□□□□□ -0.63
SMC4P1-201ENST00000414479 RHBDD1Q8TEB9 315 aa11.09□□□□□ -0.63
SMC4P1-201ENST00000414479 ALKBH8Q96BT7 664 aaKnown RBP11.09□□□□□ -0.63
SMC4P1-201ENST00000414479 FHDC1Q9C0D6 1143 aaPredicted RBP11.09□□□□□ -0.63
SMC4P1-201ENST00000414479 USP35Q9P2H5 1018 aa11.09□□□□□ -0.63
SMC4P1-201ENST00000414479 PRPF40AO75400 957 aaKnown RBP11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 RPLP1P05386 114 aaKnown RBP11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 LDHBP07195 334 aaKnown RBP11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 MZF1P28698 734 aaPredicted RBP11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 EHHADHQ08426 723 aa11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 FOXC1Q12948 553 aa11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 C1orf53Q5VUE5 145 aa11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 EMID1Q96A84 441 aaPredicted RBP11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 FAM129BQ96TA1 746 aa11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 CCDC87Q9NVE4 849 aa11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 LRFN2Q9ULH4 789 aa11.08□□□□□ -0.64
SMC4P1-201ENST00000414479 TTC24A2A3L6 582 aaPredicted RBP11.07□□□□□ -0.64
SMC4P1-201ENST00000414479 NEFLP07196 543 aa11.07□□□□□ -0.64
SMC4P1-201ENST00000414479 GPC1P35052 558 aa11.07□□□□□ -0.64
SMC4P1-201ENST00000414479 WDR4P57081 412 aaKnown RBP11.07□□□□□ -0.64
SMC4P1-201ENST00000414479 CBLBQ13191 982 aa11.07□□□□□ -0.64
SMC4P1-201ENST00000414479 DGKZQ13574 1117 aa11.07□□□□□ -0.64
SMC4P1-201ENST00000414479 TSNAXIP1Q2TAA8 658 aa11.07□□□□□ -0.64
SMC4P1-201ENST00000414479 ITPKCQ96DU7 683 aa11.07□□□□□ -0.64
SMC4P1-201ENST00000414479 IGSF3O75054 1194 aa11.06□□□□□ -0.64
SMC4P1-201ENST00000414479 NBPF1Q3BBV0 1214 aa11.06□□□□□ -0.64
SMC4P1-201ENST00000414479 SLC27A3Q5K4L6 730 aa11.06□□□□□ -0.64
SMC4P1-201ENST00000414479 PHACTR1Q9C0D0 580 aa11.06□□□□□ -0.64
SMC4P1-201ENST00000414479 HCN4Q9Y3Q4 1203 aa11.06□□□□□ -0.64
SMC4P1-201ENST00000414479 USP3Q9Y6I4 520 aa11.06□□□□□ -0.64
SMC4P1-201ENST00000414479 RECKO95980 971 aa11.05□□□□□ -0.64
SMC4P1-201ENST00000414479 ZAP70P43403 619 aa11.05□□□□□ -0.64
SMC4P1-201ENST00000414479 RELBQ01201 579 aa11.05□□□□□ -0.64
SMC4P1-201ENST00000414479 TAGLNQ01995 201 aaKnown RBP11.05□□□□□ -0.64
SMC4P1-201ENST00000414479 DSC3Q14574 896 aa11.05□□□□□ -0.64
SMC4P1-201ENST00000414479 ALG1LQ6GMV1 187 aa11.05□□□□□ -0.64
SMC4P1-201ENST00000414479 CYP4X1Q8N118 509 aa11.05□□□□□ -0.64
SMC4P1-201ENST00000414479 IFT43Q96FT9 208 aa11.05□□□□□ -0.64
SMC4P1-201ENST00000414479 DNM1Q05193 864 aaKnown RBP11.04□□□□□ -0.64
SMC4P1-201ENST00000414479 SPNS2Q8IVW8 549 aa11.04□□□□□ -0.64
SMC4P1-201ENST00000414479 ZDHHC1Q8WTX9 485 aa11.04□□□□□ -0.64
SMC4P1-201ENST00000414479 GJD3Q8N144 294 aa11.03□□□□□ -0.64
SMC4P1-201ENST00000414479 KDF1Q8NAX2 398 aaPredicted RBP11.03□□□□□ -0.64
SMC4P1-201ENST00000414479 C8orf37Q96NL8 207 aa11.03□□□□□ -0.64
SMC4P1-201ENST00000414479 POLIQ9UNA4 740 aa11.03□□□□□ -0.64
SMC4P1-201ENST00000414479 GPC6Q9Y625 555 aaPredicted RBP11.03□□□□□ -0.64
SMC4P1-201ENST00000414479 V9GY48 417 aaPredicted RBP11.03□□□□□ -0.64
SMC4P1-201ENST00000414479 SCAMP3O14828 347 aaKnown RBP11.02□□□□□ -0.65
SMC4P1-201ENST00000414479 GPR182O15218 404 aa11.02□□□□□ -0.65
SMC4P1-201ENST00000414479 UPP2O95045 317 aa11.02□□□□□ -0.65
SMC4P1-201ENST00000414479 EDEM1Q92611 657 aa11.02□□□□□ -0.65
SMC4P1-201ENST00000414479 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.65
SMC4P1-201ENST00000414479 SORBS3O60504 671 aa11.01□□□□□ -0.65
SMC4P1-201ENST00000414479 TIMP2P16035 220 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms