RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 ADAMTSL3P82987 1691 aa23.05■■□□□ 1.28
TNFRSF8-202ENST00000413146 NUTM1Q86Y26 1132 aa23.05■■□□□ 1.28
TNFRSF8-202ENST00000413146 SURF6O75683 361 aaKnown RBP23.04■■□□□ 1.28
TNFRSF8-202ENST00000413146 PHAXQ9H814 394 aaKnown RBP23.04■■□□□ 1.28
TNFRSF8-202ENST00000413146 PPP1R42Q7Z4L9 355 aa23.04■■□□□ 1.28
TNFRSF8-202ENST00000413146 ABTB2Q8N961 1025 aa23.03■■□□□ 1.28
TNFRSF8-202ENST00000413146 HSPA4P34932 840 aa23.03■■□□□ 1.28
TNFRSF8-202ENST00000413146 TPM2P07951 284 aa23.01■■□□□ 1.27
TNFRSF8-202ENST00000413146 POLA2Q14181 598 aa23.01■■□□□ 1.27
TNFRSF8-202ENST00000413146 RHPN1Q8TCX5 695 aa23.01■■□□□ 1.27
TNFRSF8-202ENST00000413146 SYAP1Q96A49 352 aaPredicted RBP23.01■■□□□ 1.27
TNFRSF8-202ENST00000413146 IL25Q9H293 177 aa23.01■■□□□ 1.27
TNFRSF8-202ENST00000413146 USHBP1Q8N6Y0 703 aa23■■□□□ 1.27
TNFRSF8-202ENST00000413146 LTN1O94822 1766 aa23■■□□□ 1.27
TNFRSF8-202ENST00000413146 SRGAP3O43295 1099 aa23■■□□□ 1.27
TNFRSF8-202ENST00000413146 KIF1BPQ96EK5 621 aa23■■□□□ 1.27
TNFRSF8-202ENST00000413146 WDR33Q9C0J8 1336 aaKnown RBP22.99■■□□□ 1.27
TNFRSF8-202ENST00000413146 MAP4K4O95819 1239 aaPredicted RBP22.99■■□□□ 1.27
TNFRSF8-202ENST00000413146 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.99■■□□□ 1.27
TNFRSF8-202ENST00000413146 PI4K2BQ8TCG2 481 aa22.99■■□□□ 1.27
TNFRSF8-202ENST00000413146 NOL7Q9UMY1 257 aaKnown RBP22.99■■□□□ 1.27
TNFRSF8-202ENST00000413146 RAD50Q92878 1312 aa22.99■■□□□ 1.27
TNFRSF8-202ENST00000413146 OFD1O75665 1012 aa22.99■■□□□ 1.27
TNFRSF8-202ENST00000413146 EIF2S2P20042 333 aaKnown RBP22.99■■□□□ 1.27
TNFRSF8-202ENST00000413146 KIAA1211Q6ZU35 1233 aa22.98■■□□□ 1.27
TNFRSF8-202ENST00000413146 C14orf37Q86TY3 774 aa22.98■■□□□ 1.27
TNFRSF8-202ENST00000413146 CNTROBQ8N137 903 aa22.98■■□□□ 1.27
TNFRSF8-202ENST00000413146 CEMIPQ8WUJ3 1361 aa22.98■■□□□ 1.27
TNFRSF8-202ENST00000413146 PLPPR3Q6T4P5 718 aa22.98■■□□□ 1.27
TNFRSF8-202ENST00000413146 SGSM2O43147 1006 aa22.97■■□□□ 1.27
TNFRSF8-202ENST00000413146 RRP9O43818 475 aaKnown RBP22.97■■□□□ 1.27
TNFRSF8-202ENST00000413146 HSP90AA2PQ14568 343 aaPredicted RBP22.97■■□□□ 1.27
TNFRSF8-202ENST00000413146 CHMP4AQ9BY43 222 aa22.97■■□□□ 1.27
TNFRSF8-202ENST00000413146 THEMISQ8N1K5 641 aaPredicted RBP22.96■■□□□ 1.27
TNFRSF8-202ENST00000413146 TSPY26PQ9H489 355 aa22.96■■□□□ 1.27
TNFRSF8-202ENST00000413146 KDM3BQ7LBC6 1761 aa22.96■■□□□ 1.27
TNFRSF8-202ENST00000413146 MED1Q15648 1581 aaPredicted RBP22.96■■□□□ 1.27
TNFRSF8-202ENST00000413146 HOXB7P09629 217 aa22.96■■□□□ 1.27
TNFRSF8-202ENST00000413146 NBPF7P0C2Y1 421 aaPredicted RBP22.96■■□□□ 1.27
TNFRSF8-202ENST00000413146 EIF4A1P60842 406 aaKnown RBP22.96■■□□□ 1.27
TNFRSF8-202ENST00000413146 HSP90AB4PQ58FF6 505 aa22.96■■□□□ 1.27
TNFRSF8-202ENST00000413146 DNAAF4Q8WXU2 420 aa22.96■■□□□ 1.27
TNFRSF8-202ENST00000413146 PHF14O94880 888 aa22.95■■□□□ 1.26
TNFRSF8-202ENST00000413146 FOXD4L6Q3SYB3 417 aaPredicted RBP22.95■■□□□ 1.26
TNFRSF8-202ENST00000413146 FOXD4L3Q6VB84 417 aaPredicted RBP22.95■■□□□ 1.26
TNFRSF8-202ENST00000413146 CHPF2Q9P2E5 772 aa22.95■■□□□ 1.26
TNFRSF8-202ENST00000413146 KCNA6P17658 529 aa22.94■■□□□ 1.26
TNFRSF8-202ENST00000413146 RNF214Q8ND24 703 aa22.94■■□□□ 1.26
TNFRSF8-202ENST00000413146 PLEKHG5O94827 1062 aa22.94■■□□□ 1.26
TNFRSF8-202ENST00000413146 SNX14Q9Y5W7 946 aa22.94■■□□□ 1.26
TNFRSF8-202ENST00000413146 ZNF500O60304 480 aaPredicted RBP22.93■■□□□ 1.26
TNFRSF8-202ENST00000413146 BEND3Q5T5X7 828 aa22.93■■□□□ 1.26
TNFRSF8-202ENST00000413146 CCDC39Q9UFE4 941 aa22.93■■□□□ 1.26
TNFRSF8-202ENST00000413146 CRYBG1Q9Y4K1 1723 aa22.93■■□□□ 1.26
TNFRSF8-202ENST00000413146 PI4KAP2A4QPH2 592 aa22.93■■□□□ 1.26
TNFRSF8-202ENST00000413146 PI4KAP1Q8N8J0 262 aa22.93■■□□□ 1.26
TNFRSF8-202ENST00000413146 LSG1Q9H089 658 aaKnown RBP22.93■■□□□ 1.26
TNFRSF8-202ENST00000413146 GDPD2Q9HCC8 539 aa22.93■■□□□ 1.26
TNFRSF8-202ENST00000413146 ZKSCAN5Q9Y2L8 839 aa22.93■■□□□ 1.26
TNFRSF8-202ENST00000413146 TCHHQ07283 1943 aa22.92■■□□□ 1.26
TNFRSF8-202ENST00000413146 RPAP1Q9BWH6 1393 aaPredicted RBP22.92■■□□□ 1.26
TNFRSF8-202ENST00000413146 OS9Q13438 667 aaPredicted RBP22.92■■□□□ 1.26
TNFRSF8-202ENST00000413146 USP48Q86UV5 1035 aa22.92■■□□□ 1.26
TNFRSF8-202ENST00000413146 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.92■■□□□ 1.26
TNFRSF8-202ENST00000413146 IP6K1Q92551 441 aa22.91■■□□□ 1.26
TNFRSF8-202ENST00000413146 GADD45BO75293 160 aaPredicted RBP22.91■■□□□ 1.26
TNFRSF8-202ENST00000413146 MCM5P33992 734 aa22.91■■□□□ 1.26
TNFRSF8-202ENST00000413146 CWC27Q6UX04 472 aaKnown RBP22.91■■□□□ 1.26
TNFRSF8-202ENST00000413146 TTC14Q96N46 770 aa22.91■■□□□ 1.26
TNFRSF8-202ENST00000413146 LGR6Q9HBX8 967 aa22.91■■□□□ 1.26
TNFRSF8-202ENST00000413146 TTC41PQ6P2S7 1318 aa22.91■■□□□ 1.26
TNFRSF8-202ENST00000413146 SETD1BQ9UPS6 1966 aaKnown RBP22.9■■□□□ 1.26
TNFRSF8-202ENST00000413146 GLRX3O76003 335 aaKnown RBP22.9■■□□□ 1.26
TNFRSF8-202ENST00000413146 AK2P54819 239 aa22.9■■□□□ 1.26
TNFRSF8-202ENST00000413146 USP42Q9H9J4 1324 aaKnown RBP22.9■■□□□ 1.26
TNFRSF8-202ENST00000413146 LMO7Q8WWI1 1683 aa22.89■■□□□ 1.26
TNFRSF8-202ENST00000413146 TEFQ10587 303 aa22.89■■□□□ 1.26
TNFRSF8-202ENST00000413146 NBPF6Q5VWK0 638 aa22.89■■□□□ 1.26
TNFRSF8-202ENST00000413146 NBPF4Q96M43 638 aa22.89■■□□□ 1.26
TNFRSF8-202ENST00000413146 LIMCH1Q9UPQ0 1083 aa22.89■■□□□ 1.26
TNFRSF8-202ENST00000413146 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.89■■□□□ 1.26
TNFRSF8-202ENST00000413146 TMEM87AQ8NBN3 555 aa22.89■■□□□ 1.25
TNFRSF8-202ENST00000413146 DIAPH3Q9NSV4 1193 aa22.89■■□□□ 1.25
TNFRSF8-202ENST00000413146 TERF1P54274 439 aa22.88■■□□□ 1.25
TNFRSF8-202ENST00000413146 GLIPR1L2Q4G1C9 344 aa22.88■■□□□ 1.25
TNFRSF8-202ENST00000413146 RASEFQ8IZ41 740 aa22.88■■□□□ 1.25
TNFRSF8-202ENST00000413146 PHF8Q9UPP1 1060 aa22.88■■□□□ 1.25
TNFRSF8-202ENST00000413146 ADCY9O60503 1353 aa22.88■■□□□ 1.25
TNFRSF8-202ENST00000413146 NFAT5O94916 1531 aa22.88■■□□□ 1.25
TNFRSF8-202ENST00000413146 ZNF142P52746 1687 aaPredicted RBP22.88■■□□□ 1.25
TNFRSF8-202ENST00000413146 ZSCAN22P10073 491 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF8-202ENST00000413146 RUFY2Q8WXA3 655 aa22.87■■□□□ 1.25
TNFRSF8-202ENST00000413146 SPG7Q9UQ90 795 aa22.87■■□□□ 1.25
TNFRSF8-202ENST00000413146 BTBD11A6QL63 1104 aa22.87■■□□□ 1.25
TNFRSF8-202ENST00000413146 KCNQ3O43525 872 aa22.87■■□□□ 1.25
TNFRSF8-202ENST00000413146 ANXA1P04083 346 aa22.87■■□□□ 1.25
TNFRSF8-202ENST00000413146 XPCQ01831 940 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF8-202ENST00000413146 CLASRPQ8N2M8 674 aaKnown RBP22.87■■□□□ 1.25
TNFRSF8-202ENST00000413146 RUFY3Q7L099 469 aa22.86■■□□□ 1.25
TNFRSF8-202ENST00000413146 SMC3Q9UQE7 1217 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms