RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 HSPA8P11142 646 aaKnown RBP3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 RGS19P49795 217 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 MTHFSP49914 203 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 DEFB115Q30KQ5 88 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 C1orf141Q5JVX7 400 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 ZNF530Q6P9A1 599 aaPredicted RBP3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 INTS5Q6P9B9 1019 aaKnown RBP3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 LDHDQ86WU2 507 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 NFATC2IPQ8NCF5 419 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 ZNF622Q969S3 477 aaKnown RBP eCLIP3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 BEGAINQ9BUH8 593 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 TAOK3Q9H2K8 898 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 TAF1DQ9H5J8 278 aaPredicted RBP3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 NARFQ9UHQ1 456 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 PDZRN3Q9UPQ7 1066 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 UBR3Q6ZT12 1888 aa3.28□□□□□ -1.88
RNU4-53P-201ENST00000410828 NCAPD2Q15021 1401 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 TOGARAM1Q9Y4F4 1720 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 LTBP3Q9NS15 1303 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 RASSF10A6NK89 507 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 ITGBL1O95965 494 aaPredicted RBP3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 PDE6BP35913 854 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 EIF4A2Q14240 407 aaKnown RBP3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 EAPPQ56P03 285 aaPredicted RBP3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 SOGA3Q5TF21 947 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 BICDL1Q6ZP65 573 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 PNMA8AQ86V59 439 aaPredicted RBP3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 DNAJC10Q8IXB1 793 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 CNKSR1Q969H4 720 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 L3MBTL3Q96JM7 780 aaPredicted RBP3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 BRIP1Q9BX63 1249 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 CARD14Q9BXL6 1004 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 ZNF219Q9P2Y4 722 aaPredicted RBP3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 POLKQ9UBT6 870 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 CLEC11AQ9Y240 323 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 TAF1LQ8IZX4 1826 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 C4AP0C0L4 1744 aa3.27□□□□□ -1.89
RNU4-53P-201ENST00000410828 SOS1Q07889 1333 aaPredicted RBP3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 WDR33Q9C0J8 1336 aaKnown RBP3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 A0A087WZG4 1122 aa3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 NPHP1O15259 732 aa3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 CYP19A1P11511 503 aaPredicted RBP3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 EPHX2P34913 555 aa3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 ECE1P42892 770 aa3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 PAXIP1Q6ZW49 1069 aaPredicted RBP3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 NPM2Q86SE8 214 aaKnown RBP3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 CNTROBQ8N137 903 aa3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 CFAP44Q96MT7 982 aa3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 SLC52A2Q9HAB3 445 aa3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 HACL1Q9UJ83 578 aa3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 ABT1Q9ULW3 272 aaKnown RBP3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 TNRC6CQ9HCJ0 1690 aaKnown RBP3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 MAP2P11137 1827 aaKnown RBP3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 KIF13BQ9NQT8 1826 aa3.26□□□□□ -1.89
RNU4-53P-201ENST00000410828 N4BP2Q86UW6 1770 aaPredicted RBP3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 KIAA1551Q9HCM1 1747 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 CA12O43570 354 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 STARD3NLO95772 234 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 SRGNP10124 158 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 CANXP27824 592 aaKnown RBP3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 MAP2K2P36507 400 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 TNNT2P45379 298 aaPredicted RBP3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 EIF5P55010 431 aaKnown RBP3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 ST5P78524 1137 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 FKBP4Q02790 459 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 GRM1Q13255 1194 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 CCDC93Q567U6 631 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 AKAP4Q5JQC9 854 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 MAP1SQ66K74 1059 aaPredicted RBP3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 STYK1Q6J9G0 422 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 PRR5LQ6MZQ0 368 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 PRPF40BQ6NWY9 871 aaKnown RBP3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 VSIG10Q8N0Z9 540 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 CNBD1Q8NA66 436 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 MASTLQ96GX5 879 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 CAPNS2Q96L46 248 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 GPR101Q96P66 508 aaPredicted RBP3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 MCOLN1Q9GZU1 580 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 BCL2L12Q9HB09 334 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 DDX21Q9NR30 783 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 ZBTB1Q9Y2K1 713 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 COL15A1P39059 1388 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 CARMIL3Q8ND23 1372 aa3.25□□□□□ -1.89
RNU4-53P-201ENST00000410828 RNF123Q5XPI4 1314 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 ARFGEF1Q9Y6D6 1849 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 FZD9O00144 591 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 RNMTO43148 476 aaKnown RBP3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 LMOD1P29536 600 aaPredicted RBP3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 EIF6P56537 245 aaKnown RBP3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 SLC39A6Q13433 755 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 TBC1D9BQ66K14 1250 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 SULT6B1Q6IMI4 303 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 CYP4F22Q6NT55 531 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 AEBP1Q8IUX7 1158 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 RTKN2Q8IZC4 609 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 TTC5Q8N0Z6 440 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 GPC2Q8N158 579 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 CCDC24Q8N4L8 307 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 C7orf43Q8WVR3 580 aa3.24□□□□□ -1.89
RNU4-53P-201ENST00000410828 JDP2Q8WYK2 163 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms