RNA–Protein interactions for RNA: ENST00000410092.7

SPIRE1-203, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-203ENST00000410092 SH2B1Q9NRF2 756 aaPredicted RBP28.63■■■□□ 2.17
SPIRE1-203ENST00000410092 RNF41Q9H4P4 317 aaPredicted RBP28.63■■■□□ 2.17
SPIRE1-203ENST00000410092 VSIG10Q8N0Z9 540 aa28.62■■■□□ 2.17
SPIRE1-203ENST00000410092 CDC5LQ99459 802 aaKnown RBP28.62■■■□□ 2.17
SPIRE1-203ENST00000410092 CCDC83Q8IWF9 413 aa28.62■■■□□ 2.17
SPIRE1-203ENST00000410092 CTCFLQ8NI51 663 aaPredicted RBP28.61■■■□□ 2.17
SPIRE1-203ENST00000410092 ZNF213O14771 459 aa28.61■■■□□ 2.17
SPIRE1-203ENST00000410092 IQCA1Q86XH1 822 aa28.6■■■□□ 2.17
SPIRE1-203ENST00000410092 RALGAPBQ86X10 1494 aa28.6■■■□□ 2.17
SPIRE1-203ENST00000410092 PPP1R42Q7Z4L9 355 aa28.6■■■□□ 2.17
SPIRE1-203ENST00000410092 EVI5LQ96CN4 794 aa28.6■■■□□ 2.17
SPIRE1-203ENST00000410092 UGGT2Q9NYU1 1516 aa28.6■■■□□ 2.17
SPIRE1-203ENST00000410092 CHRNA2Q15822 529 aa28.6■■■□□ 2.17
SPIRE1-203ENST00000410092 ZNF444Q8N0Y2 327 aaPredicted RBP28.6■■■□□ 2.17
SPIRE1-203ENST00000410092 TTF1Q15361 905 aaPredicted RBP28.59■■■□□ 2.17
SPIRE1-203ENST00000410092 ECHDC1Q9NTX5 307 aa28.59■■■□□ 2.17
SPIRE1-203ENST00000410092 NPHP3Q7Z494 1330 aa28.59■■■□□ 2.17
SPIRE1-203ENST00000410092 SMTNL1A8MU46 457 aa28.59■■■□□ 2.17
SPIRE1-203ENST00000410092 UPF3BQ9BZI7 483 aaKnown RBP28.59■■■□□ 2.17
SPIRE1-203ENST00000410092 WDR7Q9Y4E6 1490 aa28.59■■■□□ 2.17
SPIRE1-203ENST00000410092 RIMS2Q9UQ26 1411 aa28.58■■■□□ 2.17
SPIRE1-203ENST00000410092 NUP160Q12769 1436 aa28.58■■■□□ 2.17
SPIRE1-203ENST00000410092 TNIP1Q15025 636 aa28.57■■■□□ 2.16
SPIRE1-203ENST00000410092 SYCP2Q9BX26 1530 aa28.57■■■□□ 2.16
SPIRE1-203ENST00000410092 FAM83GA6ND36 823 aa28.57■■■□□ 2.16
SPIRE1-203ENST00000410092 MCM4P33991 863 aa28.57■■■□□ 2.16
SPIRE1-203ENST00000410092 PLEKHH1Q9ULM0 1364 aa28.57■■■□□ 2.16
SPIRE1-203ENST00000410092 LDHAL6AQ6ZMR3 332 aa28.57■■■□□ 2.16
SPIRE1-203ENST00000410092 PATL2C9JE40 543 aaKnown RBP28.56■■■□□ 2.16
SPIRE1-203ENST00000410092 RANBP6O60518 1105 aaKnown RBP28.56■■■□□ 2.16
SPIRE1-203ENST00000410092 BCL11BQ9C0K0 894 aaPredicted RBP28.56■■■□□ 2.16
SPIRE1-203ENST00000410092 PPIP5K1Q6PFW1 1433 aa28.56■■■□□ 2.16
SPIRE1-203ENST00000410092 PI4KAP2A4QPH2 592 aa28.56■■■□□ 2.16
SPIRE1-203ENST00000410092 PI4KAP1Q8N8J0 262 aa28.56■■■□□ 2.16
SPIRE1-203ENST00000410092 SLC12A7Q9Y666 1083 aa28.56■■■□□ 2.16
SPIRE1-203ENST00000410092 NOM1Q5C9Z4 860 aaKnown RBP28.55■■■□□ 2.16
SPIRE1-203ENST00000410092 DDX46Q7L014 1031 aaKnown RBP28.55■■■□□ 2.16
SPIRE1-203ENST00000410092 HMGN5P82970 282 aaKnown RBP28.55■■■□□ 2.16
SPIRE1-203ENST00000410092 NUP153P49790 1475 aaKnown RBP28.55■■■□□ 2.16
SPIRE1-203ENST00000410092 ATP5J2-PTCD1G3V325 749 aa28.54■■■□□ 2.16
SPIRE1-203ENST00000410092 PHAXQ9H814 394 aaKnown RBP28.54■■■□□ 2.16
SPIRE1-203ENST00000410092 PAF1Q8N7H5 531 aa28.54■■■□□ 2.16
SPIRE1-203ENST00000410092 LDHCP07864 332 aa28.54■■■□□ 2.16
SPIRE1-203ENST00000410092 UBE3BQ7Z3V4 1068 aa28.54■■■□□ 2.16
SPIRE1-203ENST00000410092 MAP3K11Q16584 847 aa28.53■■■□□ 2.16
SPIRE1-203ENST00000410092 C8orf76Q96K31 380 aa28.53■■■□□ 2.16
SPIRE1-203ENST00000410092 C6orf229H3BNL8 230 aa28.53■■■□□ 2.16
SPIRE1-203ENST00000410092 ZCRB1Q8TBF4 217 aaKnown RBP28.53■■■□□ 2.16
SPIRE1-203ENST00000410092 GRPEL1Q9HAV7 217 aa28.53■■■□□ 2.16
SPIRE1-203ENST00000410092 FERMT3Q86UX7 667 aa28.53■■■□□ 2.16
SPIRE1-203ENST00000410092 SCAND2PQ9GZW5 306 aaPredicted RBP28.52■■■□□ 2.16
SPIRE1-203ENST00000410092 ANKRD13DQ6ZTN6 518 aa28.51■■■□□ 2.16
SPIRE1-203ENST00000410092 ERLIN2O94905 339 aa28.51■■■□□ 2.15
SPIRE1-203ENST00000410092 RFC4P35249 363 aa28.51■■■□□ 2.15
SPIRE1-203ENST00000410092 CCDC96Q2M329 555 aa28.51■■■□□ 2.15
SPIRE1-203ENST00000410092 LIMCH1Q9UPQ0 1083 aa28.51■■■□□ 2.15
SPIRE1-203ENST00000410092 ASXL1Q8IXJ9 1541 aa28.5■■■□□ 2.15
SPIRE1-203ENST00000410092 ARHGAP45Q92619 1136 aa28.5■■■□□ 2.15
SPIRE1-203ENST00000410092 IFIT3O14879 490 aaKnown RBP28.5■■■□□ 2.15
SPIRE1-203ENST00000410092 MTERF4Q7Z6M4 381 aaKnown RBP28.5■■■□□ 2.15
SPIRE1-203ENST00000410092 GOLIM4O00461 696 aa28.5■■■□□ 2.15
SPIRE1-203ENST00000410092 MATR3P43243 847 aaKnown RBP eCLIP28.5■■■□□ 2.15
SPIRE1-203ENST00000410092 CCDC181Q5TID7 509 aa28.49■■■□□ 2.15
SPIRE1-203ENST00000410092 TOM1O60784 492 aa28.49■■■□□ 2.15
SPIRE1-203ENST00000410092 GOLGA8AA7E2F4 631 aa28.49■■■□□ 2.15
SPIRE1-203ENST00000410092 GOLGA8BA8MQT2 603 aa28.49■■■□□ 2.15
SPIRE1-203ENST00000410092 SSRP1Q08945 709 aaKnown RBP28.49■■■□□ 2.15
SPIRE1-203ENST00000410092 SPTY2D1Q68D10 685 aaPredicted RBP28.48■■■□□ 2.15
SPIRE1-203ENST00000410092 CATIPQ7Z7H3 387 aa28.48■■■□□ 2.15
SPIRE1-203ENST00000410092 CUL5Q93034 780 aa28.47■■■□□ 2.15
SPIRE1-203ENST00000410092 WDHD1O75717 1129 aaPredicted RBP28.47■■■□□ 2.15
SPIRE1-203ENST00000410092 RAB34Q9BZG1 259 aa28.47■■■□□ 2.15
SPIRE1-203ENST00000410092 PPP1R12BO60237 982 aaPredicted RBP28.47■■■□□ 2.15
SPIRE1-203ENST00000410092 BAG3O95817 575 aa28.47■■■□□ 2.15
SPIRE1-203ENST00000410092 UQCRFS1P1P0C7P4 283 aa28.47■■■□□ 2.15
SPIRE1-203ENST00000410092 ABCC10Q5T3U5 1492 aa28.47■■■□□ 2.15
SPIRE1-203ENST00000410092 EIF5P55010 431 aaKnown RBP28.47■■■□□ 2.15
SPIRE1-203ENST00000410092 CCDC152Q4G0S7 254 aa28.47■■■□□ 2.15
SPIRE1-203ENST00000410092 AKAP4Q5JQC9 854 aa28.47■■■□□ 2.15
SPIRE1-203ENST00000410092 FBXO3Q9UK99 471 aa28.46■■■□□ 2.15
SPIRE1-203ENST00000410092 ST5P78524 1137 aa28.45■■■□□ 2.15
SPIRE1-203ENST00000410092 BMP2KLQ5H9B9 411 aa28.45■■■□□ 2.15
SPIRE1-203ENST00000410092 SEPT11Q9NVA2 429 aaKnown RBP28.45■■■□□ 2.14
SPIRE1-203ENST00000410092 ZNF219Q9P2Y4 722 aaPredicted RBP28.45■■■□□ 2.14
SPIRE1-203ENST00000410092 PUS7Q96PZ0 661 aaKnown RBP28.44■■■□□ 2.14
SPIRE1-203ENST00000410092 PRAG1Q86YV5 1406 aa28.44■■■□□ 2.14
SPIRE1-203ENST00000410092 TRAPPC8Q9Y2L5 1435 aa28.44■■■□□ 2.14
SPIRE1-203ENST00000410092 FBLN1P23142 703 aa28.44■■■□□ 2.14
SPIRE1-203ENST00000410092 TMEM266Q2M3C6 531 aa28.44■■■□□ 2.14
SPIRE1-203ENST00000410092 NBPF6Q5VWK0 638 aa28.44■■■□□ 2.14
SPIRE1-203ENST00000410092 NBPF5PQ86XG9 351 aaPredicted RBP28.44■■■□□ 2.14
SPIRE1-203ENST00000410092 NBPF4Q96M43 638 aa28.44■■■□□ 2.14
SPIRE1-203ENST00000410092 EHMT1Q9H9B1 1298 aa28.43■■■□□ 2.14
SPIRE1-203ENST00000410092 CHPF2Q9P2E5 772 aa28.43■■■□□ 2.14
SPIRE1-203ENST00000410092 CCDC194A0A1B0GVG4 234 aa28.43■■■□□ 2.14
SPIRE1-203ENST00000410092 MAP7D2Q96T17 732 aa28.43■■■□□ 2.14
SPIRE1-203ENST00000410092 DESP17661 470 aa28.43■■■□□ 2.14
SPIRE1-203ENST00000410092 SMARCC1Q92922 1105 aaPredicted RBP28.42■■■□□ 2.14
SPIRE1-203ENST00000410092 PDE4BQ07343 736 aa28.42■■■□□ 2.14
SPIRE1-203ENST00000410092 SNRKQ9NRH2 765 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms