RNA–Protein interactions for RNA: ENST00000409704.6

ITM2C-204, Transcript of integral membrane protein 2C, humanhuman

TSL 5 BASIC

Gene ITM2C, Length 1,106 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-204ENST00000409704 N4BP2Q86UW6 1770 aaPredicted RBP23.83■■□□□ 1.4
ITM2C-204ENST00000409704 PXDNLA1KZ92 1463 aa23.82■■□□□ 1.4
ITM2C-204ENST00000409704 BTBD11A6QL63 1104 aa23.81■■□□□ 1.4
ITM2C-204ENST00000409704 HTATSF1O43719 755 aaKnown RBP23.81■■□□□ 1.4
ITM2C-204ENST00000409704 NEFMP07197 916 aa23.81■■□□□ 1.4
ITM2C-204ENST00000409704 YBX3P16989 372 aaKnown RBP eCLIP23.81■■□□□ 1.47e-7■□□□□ 10.9
ITM2C-204ENST00000409704 DCTN1Q14203 1278 aa23.81■■□□□ 1.4
ITM2C-204ENST00000409704 FMNL2Q96PY5 1086 aa23.81■■□□□ 1.4
ITM2C-204ENST00000409704 BRCA1P38398 1863 aaKnown RBP23.81■■□□□ 1.4
ITM2C-204ENST00000409704 BCORQ6W2J9 1755 aa23.8■■□□□ 1.4
ITM2C-204ENST00000409704 NRXN2Q9P2S2 1712 aa23.79■■□□□ 1.4
ITM2C-204ENST00000409704 KCNQ3O43525 872 aa23.79■■□□□ 1.4
ITM2C-204ENST00000409704 ZEB1P37275 1124 aaPredicted RBP23.79■■□□□ 1.4
ITM2C-204ENST00000409704 AFDNP55196 1824 aaKnown RBP23.78■■□□□ 1.4
ITM2C-204ENST00000409704 STARD3NLO95772 234 aa23.78■■□□□ 1.4
ITM2C-204ENST00000409704 FKBP8Q14318 412 aa23.78■■□□□ 1.4
ITM2C-204ENST00000409704 MAPK8IP3Q9UPT6 1336 aa23.78■■□□□ 1.4
ITM2C-204ENST00000409704 NFE2L2Q16236 605 aa23.77■■□□□ 1.4
ITM2C-204ENST00000409704 USPL1Q5W0Q7 1092 aa23.77■■□□□ 1.4
ITM2C-204ENST00000409704 TEX13AQ9BXU3 409 aaPredicted RBP23.77■■□□□ 1.4
ITM2C-204ENST00000409704 PARP3Q9Y6F1 533 aa23.77■■□□□ 1.4
ITM2C-204ENST00000409704 ZPR1O75312 459 aa23.76■■□□□ 1.39
ITM2C-204ENST00000409704 CANXP27824 592 aaKnown RBP23.76■■□□□ 1.39
ITM2C-204ENST00000409704 PNNQ9H307 717 aaKnown RBP23.76■■□□□ 1.39
ITM2C-204ENST00000409704 DDR1Q08345 913 aa23.75■■□□□ 1.39
ITM2C-204ENST00000409704 NARFQ9UHQ1 456 aa23.75■■□□□ 1.39
ITM2C-204ENST00000409704 GRIN3BO60391 1043 aa23.74■■□□□ 1.39
ITM2C-204ENST00000409704 EIF5P55010 431 aaKnown RBP23.73■■□□□ 1.39
ITM2C-204ENST00000409704 POLRMTO00411 1230 aaKnown RBP23.72■■□□□ 1.39
ITM2C-204ENST00000409704 PRKRIP1Q9H875 184 aaPredicted RBP23.72■■□□□ 1.39
ITM2C-204ENST00000409704 TAF7Q15545 349 aaPredicted RBP23.71■■□□□ 1.39
ITM2C-204ENST00000409704 BCL2L12Q9HB09 334 aa23.71■■□□□ 1.39
ITM2C-204ENST00000409704 WWC3Q9ULE0 1092 aa23.71■■□□□ 1.39
ITM2C-204ENST00000409704 DLEC1Q9Y238 1755 aa23.7■■□□□ 1.39
ITM2C-204ENST00000409704 TM4SF1P30408 202 aa23.7■■□□□ 1.38
ITM2C-204ENST00000409704 IL6STP40189 918 aaPredicted RBP23.7■■□□□ 1.38
ITM2C-204ENST00000409704 TGFB2P61812 414 aa23.7■■□□□ 1.38
ITM2C-204ENST00000409704 ARFGEF1Q9Y6D6 1849 aa23.7■■□□□ 1.38
ITM2C-204ENST00000409704 A0A087WZG4 1122 aa23.69■■□□□ 1.38
ITM2C-204ENST00000409704 PRAMEF22A3QJZ6 481 aa23.69■■□□□ 1.38
ITM2C-204ENST00000409704 A1BGP04217 495 aa23.68■■□□□ 1.38
ITM2C-204ENST00000409704 SNRPA1P09661 255 aaKnown RBP23.68■■□□□ 1.38
ITM2C-204ENST00000409704 NFIXQ14938 502 aa23.68■■□□□ 1.38
ITM2C-204ENST00000409704 THUMPD2Q9BTF0 503 aaKnown RBP23.68■■□□□ 1.38
ITM2C-204ENST00000409704 ZNF330Q9Y3S2 320 aaPredicted RBP23.68■■□□□ 1.38
ITM2C-204ENST00000409704 USP16Q9Y5T5 823 aa23.68■■□□□ 1.38
ITM2C-204ENST00000409704 ZNF784Q8NCA9 323 aaPredicted RBP23.67■■□□□ 1.38
ITM2C-204ENST00000409704 PNISRQ8TF01 805 aaKnown RBP23.67■■□□□ 1.38
ITM2C-204ENST00000409704 MIS18AQ9NYP9 233 aa23.66■■□□□ 1.38
ITM2C-204ENST00000409704 ANKRD31Q8N7Z5 1873 aa23.65■■□□□ 1.38
ITM2C-204ENST00000409704 A0A0G2JLW4 131 aa23.65■■□□□ 1.38
ITM2C-204ENST00000409704 DPEP1P16444 411 aa23.65■■□□□ 1.38
ITM2C-204ENST00000409704 WDR43Q15061 677 aaKnown RBP eCLIP23.65■■□□□ 1.38
ITM2C-204ENST00000409704 TMPOP42166 694 aaKnown RBP23.63■■□□□ 1.37
ITM2C-204ENST00000409704 PIP4K2AP48426 406 aaPredicted RBP23.63■■□□□ 1.37
ITM2C-204ENST00000409704 CCDC146Q8IYE0 955 aa23.63■■□□□ 1.37
ITM2C-204ENST00000409704 TBC1D2BQ9UPU7 963 aa23.63■■□□□ 1.37
ITM2C-204ENST00000409704 COL11A2P13942 1736 aaPredicted RBP23.62■■□□□ 1.37
ITM2C-204ENST00000409704 CAMTA2O94983 1202 aa23.62■■□□□ 1.37
ITM2C-204ENST00000409704 RIPK4P57078 832 aa23.62■■□□□ 1.37
ITM2C-204ENST00000409704 ADCY9O60503 1353 aa23.62■■□□□ 1.37
ITM2C-204ENST00000409704 CARMIL3Q8ND23 1372 aa23.62■■□□□ 1.37
ITM2C-204ENST00000409704 LMOD3Q0VAK6 560 aa23.61■■□□□ 1.37
ITM2C-204ENST00000409704 NPM2Q86SE8 214 aaKnown RBP23.61■■□□□ 1.37
ITM2C-204ENST00000409704 SERPINB2P05120 415 aa23.6■■□□□ 1.37
ITM2C-204ENST00000409704 KCNA3P22001 575 aa23.6■■□□□ 1.37
ITM2C-204ENST00000409704 EIF4A1P60842 406 aaKnown RBP23.6■■□□□ 1.37
ITM2C-204ENST00000409704 TBC1D9BQ66K14 1250 aa23.6■■□□□ 1.37
ITM2C-204ENST00000409704 DZIP3Q86Y13 1208 aaKnown RBP23.6■■□□□ 1.37
ITM2C-204ENST00000409704 RUNDC1Q96C34 613 aa23.6■■□□□ 1.37
ITM2C-204ENST00000409704 BCS1LQ9Y276 419 aa23.6■■□□□ 1.37
ITM2C-204ENST00000409704 NBPF26B4DH59 902 aa23.59■■□□□ 1.37
ITM2C-204ENST00000409704 NBPF10Q6P3W6 841 aaKnown RBP23.59■■□□□ 1.37
ITM2C-204ENST00000409704 BICDL1Q6ZP65 573 aa23.59■■□□□ 1.37
ITM2C-204ENST00000409704 NBPF15Q8N660 670 aa23.59■■□□□ 1.37
ITM2C-204ENST00000409704 RRP7AQ9Y3A4 280 aaKnown RBP23.59■■□□□ 1.37
ITM2C-204ENST00000409704 GIGYF1O75420 1035 aaPredicted RBP23.58■■□□□ 1.37
ITM2C-204ENST00000409704 ADAMTS8Q9UP79 889 aa23.58■■□□□ 1.37
ITM2C-204ENST00000409704 CHRNA5P30532 468 aa23.57■■□□□ 1.36
ITM2C-204ENST00000409704 TSPYL4Q9UJ04 414 aa23.57■■□□□ 1.36
ITM2C-204ENST00000409704 ATP10DQ9P241 1426 aa23.57■■□□□ 1.36
ITM2C-204ENST00000409704 PIM2Q9P1W9 311 aa23.55■■□□□ 1.36
ITM2C-204ENST00000409704 ZNF316A6NFI3 1004 aaPredicted RBP23.54■■□□□ 1.36
ITM2C-204ENST00000409704 BABAM1Q9NWV8 329 aa23.54■■□□□ 1.36
ITM2C-204ENST00000409704 NEUROD2Q15784 382 aa23.53■■□□□ 1.36
ITM2C-204ENST00000409704 TRIM35Q9UPQ4 493 aa23.53■■□□□ 1.36
ITM2C-204ENST00000409704 NUP98P52948 1817 aa23.53■■□□□ 1.36
ITM2C-204ENST00000409704 ARFGEF2Q9Y6D5 1785 aa23.52■■□□□ 1.36
ITM2C-204ENST00000409704 RGL2O15211 777 aa23.52■■□□□ 1.36
ITM2C-204ENST00000409704 DALRD3Q5D0E6 543 aaKnown RBP23.52■■□□□ 1.36
ITM2C-204ENST00000409704 PRR5LQ6MZQ0 368 aa23.52■■□□□ 1.36
ITM2C-204ENST00000409704 ZNF652Q9Y2D9 606 aa23.52■■□□□ 1.36
ITM2C-204ENST00000409704 CACNA1SQ13698 1873 aa23.51■■□□□ 1.35
ITM2C-204ENST00000409704 CLEC4GQ6UXB4 293 aa23.51■■□□□ 1.35
ITM2C-204ENST00000409704 SETDB2Q96T68 719 aa23.51■■□□□ 1.35
ITM2C-204ENST00000409704 CNBD1Q8NA66 436 aa23.5■■□□□ 1.35
ITM2C-204ENST00000409704 ERBB4Q15303 1308 aa23.5■■□□□ 1.35
ITM2C-204ENST00000409704 C2CD5Q86YS7 1000 aa23.48■■□□□ 1.35
ITM2C-204ENST00000409704 TNRC6CQ9HCJ0 1690 aaKnown RBP23.48■■□□□ 1.35
ITM2C-204ENST00000409704 SBF1O95248 1867 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms