RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
SH3D19-202ENST00000409252 GJD4Q96KN9 370 aaPredicted RBP10.35□□□□□ -0.75
SH3D19-202ENST00000409252 MFAP1P55081 439 aaKnown RBP10.34□□□□□ -0.75
SH3D19-202ENST00000409252 DNAJC10Q8IXB1 793 aa10.34□□□□□ -0.75
SH3D19-202ENST00000409252 BABAM1Q9NWV8 329 aa10.34□□□□□ -0.75
SH3D19-202ENST00000409252 PARP3Q9Y6F1 533 aa10.34□□□□□ -0.75
SH3D19-202ENST00000409252 TTC39AQ5SRH9 613 aa10.34□□□□□ -0.75
SH3D19-202ENST00000409252 ZNF622Q969S3 477 aaKnown RBP eCLIP10.34□□□□□ -0.75
SH3D19-202ENST00000409252 CCDC87Q9NVE4 849 aa10.34□□□□□ -0.75
SH3D19-202ENST00000409252 CRB1P82279 1406 aa10.34□□□□□ -0.75
SH3D19-202ENST00000409252 IFIT5Q13325 482 aaKnown RBP10.34□□□□□ -0.75
SH3D19-202ENST00000409252 CEP126Q9P2H0 1117 aa10.34□□□□□ -0.75
SH3D19-202ENST00000409252 CCDC158Q5M9N0 1113 aa10.33□□□□□ -0.76
SH3D19-202ENST00000409252 UBE3BQ7Z3V4 1068 aa10.33□□□□□ -0.76
SH3D19-202ENST00000409252 DNAJC2Q99543 621 aaKnown RBP10.33□□□□□ -0.76
SH3D19-202ENST00000409252 TSPYL6Q8N831 410 aa10.33□□□□□ -0.76
SH3D19-202ENST00000409252 ZNF496Q96IT1 587 aaPredicted RBP10.33□□□□□ -0.76
SH3D19-202ENST00000409252 APPP05067 770 aa10.33□□□□□ -0.76
SH3D19-202ENST00000409252 METTL24Q5JXM2 366 aa10.33□□□□□ -0.76
SH3D19-202ENST00000409252 ANKRD18BA2A2Z9 1011 aa10.32□□□□□ -0.76
SH3D19-202ENST00000409252 DDX46Q7L014 1031 aaKnown RBP10.32□□□□□ -0.76
SH3D19-202ENST00000409252 ANKIB1Q9P2G1 1089 aa10.32□□□□□ -0.76
SH3D19-202ENST00000409252 TRIM35Q9UPQ4 493 aa10.32□□□□□ -0.76
SH3D19-202ENST00000409252 IL17REQ8NFR9 667 aa10.32□□□□□ -0.76
SH3D19-202ENST00000409252 RUFY2Q8WXA3 655 aa10.32□□□□□ -0.76
SH3D19-202ENST00000409252 ARHGEF28Q8N1W1 1705 aaKnown RBP10.32□□□□□ -0.76
SH3D19-202ENST00000409252 TRIM27P14373 513 aa10.32□□□□□ -0.76
SH3D19-202ENST00000409252 KSR2Q6VAB6 950 aa10.32□□□□□ -0.76
SH3D19-202ENST00000409252 JARID2Q92833 1246 aaPredicted RBP10.32□□□□□ -0.76
SH3D19-202ENST00000409252 VPS72Q15906 364 aa10.32□□□□□ -0.76
SH3D19-202ENST00000409252 WASHC4Q2M389 1173 aa10.32□□□□□ -0.76
SH3D19-202ENST00000409252 FBXO41Q8TF61 875 aa10.31□□□□□ -0.76
SH3D19-202ENST00000409252 NYXQ9GZU5 481 aa10.31□□□□□ -0.76
SH3D19-202ENST00000409252 LRRFIP2Q9Y608 721 aaKnown RBP10.31□□□□□ -0.76
SH3D19-202ENST00000409252 SOS1Q07889 1333 aaPredicted RBP10.31□□□□□ -0.76
SH3D19-202ENST00000409252 UTP14AQ9BVJ6 771 aaKnown RBP10.31□□□□□ -0.76
SH3D19-202ENST00000409252 LRRCC1Q9C099 1032 aa10.31□□□□□ -0.76
SH3D19-202ENST00000409252 DDX21Q9NR30 783 aaKnown RBP eCLIP10.31□□□□□ -0.76
SH3D19-202ENST00000409252 ITSN1Q15811 1721 aa10.31□□□□□ -0.76
SH3D19-202ENST00000409252 A1BGP04217 495 aa10.31□□□□□ -0.76
SH3D19-202ENST00000409252 RPAP2Q8IXW5 612 aaPredicted RBP10.31□□□□□ -0.76
SH3D19-202ENST00000409252 GCC1Q96CN9 775 aa10.31□□□□□ -0.76
SH3D19-202ENST00000409252 CDC5LQ99459 802 aaKnown RBP10.31□□□□□ -0.76
SH3D19-202ENST00000409252 PNPLA6Q8IY17 1366 aa10.31□□□□□ -0.76
SH3D19-202ENST00000409252 CHL1O00533 1208 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 USP19O94966 1318 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 TPTE2Q6XPS3 522 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 FSD1Q9BTV5 496 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 OVOS2A0A0J9YW53 1432 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 OVOS2Q6IE36 1432 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 LOC102724428A0A0B4J2F2 783 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 HOXB7P09629 217 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 SIK1P57059 783 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 AACSQ86V21 672 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 HSCBQ8IWL3 235 aa10.3□□□□□ -0.76
SH3D19-202ENST00000409252 SPINK5Q9NQ38 1064 aaPredicted RBP10.3□□□□□ -0.76
SH3D19-202ENST00000409252 VAMP4O75379 141 aa10.29□□□□□ -0.76
SH3D19-202ENST00000409252 CCDC152Q4G0S7 254 aa10.29□□□□□ -0.76
SH3D19-202ENST00000409252 MRPL50Q8N5N7 158 aaKnown RBP10.29□□□□□ -0.76
SH3D19-202ENST00000409252 NLRP3Q96P20 1036 aa10.29□□□□□ -0.76
SH3D19-202ENST00000409252 ASAP1Q9ULH1 1129 aa10.29□□□□□ -0.76
SH3D19-202ENST00000409252 EIF4A1P60842 406 aaKnown RBP10.29□□□□□ -0.76
SH3D19-202ENST00000409252 SSH2Q76I76 1423 aa10.29□□□□□ -0.76
SH3D19-202ENST00000409252 KCNQ3O43525 872 aa10.29□□□□□ -0.76
SH3D19-202ENST00000409252 PHAXQ9H814 394 aaKnown RBP10.28□□□□□ -0.76
SH3D19-202ENST00000409252 IL1RAPL2Q9NP60 686 aa10.28□□□□□ -0.76
SH3D19-202ENST00000409252 FAM161AQ3B820 660 aa10.28□□□□□ -0.76
SH3D19-202ENST00000409252 EXOC6BQ9Y2D4 811 aa10.28□□□□□ -0.76
SH3D19-202ENST00000409252 C6orf229H3BNL8 230 aa10.28□□□□□ -0.76
SH3D19-202ENST00000409252 IFIT1P09914 478 aaKnown RBP10.28□□□□□ -0.76
SH3D19-202ENST00000409252 CNTROBQ8N137 903 aa10.28□□□□□ -0.76
SH3D19-202ENST00000409252 CNBD1Q8NA66 436 aa10.28□□□□□ -0.76
SH3D19-202ENST00000409252 PLEKHF1Q96S99 279 aa10.28□□□□□ -0.76
SH3D19-202ENST00000409252 WWC3Q9ULE0 1092 aa10.28□□□□□ -0.76
SH3D19-202ENST00000409252 ALDH1L1O75891 902 aa10.28□□□□□ -0.76
SH3D19-202ENST00000409252 OVOS2A0A0G2JMS6 1433 aa10.28□□□□□ -0.76
SH3D19-202ENST00000409252 RBM5P52756 815 aaKnown RBP eCLIP10.27□□□□□ -0.76
SH3D19-202ENST00000409252 AKAP2Q9Y2D5 859 aa10.27□□□□□ -0.76
SH3D19-202ENST00000409252 SPATA31A1Q5TZJ5 1347 aa10.27□□□□□ -0.76
SH3D19-202ENST00000409252 CHAF1AQ13111 956 aaPredicted RBP10.27□□□□□ -0.77
SH3D19-202ENST00000409252 ARHGAP45Q92619 1136 aa10.27□□□□□ -0.77
SH3D19-202ENST00000409252 CYP27B1O15528 508 aa10.27□□□□□ -0.77
SH3D19-202ENST00000409252 CAVIN4Q5BKX8 364 aa10.27□□□□□ -0.77
SH3D19-202ENST00000409252 LINS1Q8NG48 757 aa10.27□□□□□ -0.77
SH3D19-202ENST00000409252 GRM8O00222 908 aa10.27□□□□□ -0.77
SH3D19-202ENST00000409252 RAD21O60216 631 aa10.27□□□□□ -0.77
SH3D19-202ENST00000409252 C20orf194Q5TEA3 1177 aa10.27□□□□□ -0.77
SH3D19-202ENST00000409252 LDHAL6AQ6ZMR3 332 aa10.27□□□□□ -0.77
SH3D19-202ENST00000409252 FLAD1Q8NFF5 587 aa10.27□□□□□ -0.77
SH3D19-202ENST00000409252 PLBD2Q8NHP8 589 aa10.27□□□□□ -0.77
SH3D19-202ENST00000409252 CWF19L2Q2TBE0 894 aaKnown RBP10.26□□□□□ -0.77
SH3D19-202ENST00000409252 FKBP4Q02790 459 aaKnown RBP eCLIP10.26□□□□□ -0.77
SH3D19-202ENST00000409252 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.26□□□□□ -0.77
SH3D19-202ENST00000409252 PDZRN3Q9UPQ7 1066 aa10.26□□□□□ -0.77
SH3D19-202ENST00000409252 SLC5A1P13866 664 aa10.26□□□□□ -0.77
SH3D19-202ENST00000409252 MSL1Q68DK7 614 aa10.26□□□□□ -0.77
SH3D19-202ENST00000409252 ANKRD18AQ8IVF6 992 aa10.26□□□□□ -0.77
SH3D19-202ENST00000409252 PIGBQ92521 554 aa10.26□□□□□ -0.77
SH3D19-202ENST00000409252 POLR1AO95602 1720 aaPredicted RBP10.26□□□□□ -0.77
SH3D19-202ENST00000409252 PALLDQ8WX93 1383 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms