RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 RTEL1-TNFRSF6BF6WH68 1400 aa15.07■□□□□ 0
ERBB2-202ENST00000406381 FAM193AP78312 1265 aa15.07■□□□□ 0
ERBB2-202ENST00000406381 TYRO3Q06418 890 aa15.07■□□□□ 0
ERBB2-202ENST00000406381 MEIS3Q99687 375 aa15.07■□□□□ 0
ERBB2-202ENST00000406381 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.07■□□□□ 08e-7■□□□□ 9.9
ERBB2-202ENST00000406381 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
ERBB2-202ENST00000406381 V9GYY5 206 aaPredicted RBP15.07■□□□□ 0
ERBB2-202ENST00000406381 GOLGA6L9A6NEM1 432 aa15.06■□□□□ 0
ERBB2-202ENST00000406381 HSP90AB3PQ58FF7 597 aa15.06■□□□□ 0
ERBB2-202ENST00000406381 DMRT2Q9Y5R5 561 aa15.06■□□□□ 0
ERBB2-202ENST00000406381 PLB1Q6P1J6 1458 aa15.06■□□□□ 0
ERBB2-202ENST00000406381 RIOK3O14730 519 aaKnown RBP15.06■□□□□ 0
ERBB2-202ENST00000406381 IQCEQ6IPM2 695 aa15.06■□□□□ 0
ERBB2-202ENST00000406381 FAM107BQ9H098 131 aa15.06■□□□□ 0
ERBB2-202ENST00000406381 MAP9Q49MG5 647 aa15.05■□□□□ 0
ERBB2-202ENST00000406381 CTNNA3Q9UI47 895 aa15.05■□□□□ 0
ERBB2-202ENST00000406381 EMILIN1Q9Y6C2 1016 aa15.05■□□□□ 0
ERBB2-202ENST00000406381 GOLGA6L10A6NI86 522 aa15.05■□□□□ 0
ERBB2-202ENST00000406381 CDKL5O76039 1030 aa15.05■□□□□ 0
ERBB2-202ENST00000406381 TUBB4AP04350 444 aa15.05■□□□□ 0
ERBB2-202ENST00000406381 SLC3A2P08195 630 aaKnown RBP15.05■□□□□ 0
ERBB2-202ENST00000406381 TRIM22Q8IYM9 498 aa15.05■□□□□ 0
ERBB2-202ENST00000406381 ARFGAP3Q9NP61 516 aa15.05■□□□□ 0
ERBB2-202ENST00000406381 COL17A1Q9UMD9 1497 aaPredicted RBP15.05■□□□□ 0
ERBB2-202ENST00000406381 U2AF2P26368 475 aaKnown RBP eCLIP15.05■□□□□ -01e-6■□□□□ 10.6
ERBB2-202ENST00000406381 FAM69CQ0P6D2 419 aa15.05■□□□□ -0
ERBB2-202ENST00000406381 GABPB1Q06547 395 aaPredicted RBP15.05■□□□□ -0
ERBB2-202ENST00000406381 CCDC181Q5TID7 509 aa15.05■□□□□ -0
ERBB2-202ENST00000406381 NUTM2GQ5VZR2 741 aa15.05■□□□□ -0
ERBB2-202ENST00000406381 POTEB2H3BUK9 544 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 CCAR1Q8IX12 1150 aaKnown RBP15.04■□□□□ -0
ERBB2-202ENST00000406381 CCDC148Q8NFR7 591 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 ECHDC1Q9NTX5 307 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 NPC1L1Q9UHC9 1359 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 TXLNAP40222 546 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 PLEKHO1Q53GL0 409 aaPredicted RBP15.04■□□□□ -0
ERBB2-202ENST00000406381 DNAJC25Q9H1X3 360 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 BOLA2Q9H3K6 86 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 TMEM63CQ9P1W3 806 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 SHTN1A0MZ66 631 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 ZBTB7BO15156 539 aaPredicted RBP15.04■□□□□ -0
ERBB2-202ENST00000406381 FLIIQ13045 1269 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 TXNDC2Q86VQ3 553 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 CARD14Q9BXL6 1004 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 ZSCAN16Q9H4T2 348 aaPredicted RBP15.04■□□□□ -0
ERBB2-202ENST00000406381 CCDC61Q9Y6R9 512 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 IFT140Q96RY7 1462 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 BICRAQ9NZM4 1560 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 NPHP3Q7Z494 1330 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 VAMP4O75379 141 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 RAPGEF4Q8WZA2 1011 aa15.04■□□□□ -0
ERBB2-202ENST00000406381 HMGB1P09429 215 aaKnown RBP15.03■□□□□ -0
ERBB2-202ENST00000406381 GNG11P61952 73 aa15.03■□□□□ -0
ERBB2-202ENST00000406381 DNAI1Q9UI46 699 aa15.03■□□□□ -0
ERBB2-202ENST00000406381 TBC1D2BQ9UPU7 963 aa15.03■□□□□ -0
ERBB2-202ENST00000406381 NECAB1Q8N987 351 aa15.03■□□□□ -0
ERBB2-202ENST00000406381 EVI5LQ96CN4 794 aa15.03■□□□□ -0
ERBB2-202ENST00000406381 U3KPZ7 1027 aaPredicted RBP15.03■□□□□ -0
ERBB2-202ENST00000406381 SRRTQ9BXP5 876 aaKnown RBP15.03■□□□□ -0
ERBB2-202ENST00000406381 ANKRD36BQ8N2N9 1353 aa15.02■□□□□ -0
ERBB2-202ENST00000406381 BIN1O00499 593 aa15.02■□□□□ -0
ERBB2-202ENST00000406381 MCM3P25205 808 aa15.02■□□□□ -0
ERBB2-202ENST00000406381 GUCY1B3Q02153 619 aa15.02■□□□□ -0
ERBB2-202ENST00000406381 C8orf76Q96K31 380 aa15.02■□□□□ -0
ERBB2-202ENST00000406381 PSME1Q06323 249 aa15.02■□□□□ -0
ERBB2-202ENST00000406381 CCDC158Q5M9N0 1113 aa15.02■□□□□ -0
ERBB2-202ENST00000406381 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
ERBB2-202ENST00000406381 C17orf53Q8N3J3 647 aaPredicted RBP15.02□□□□□ -0.01
ERBB2-202ENST00000406381 DNAJC5BQ9UF47 199 aa15.02□□□□□ -0.01
ERBB2-202ENST00000406381 C14orf93Q9H972 538 aaKnown RBP15.02□□□□□ -0.01
ERBB2-202ENST00000406381 PZPP20742 1482 aa15.01□□□□□ -0.01
ERBB2-202ENST00000406381 FAM83GA6ND36 823 aa15.01□□□□□ -0.01
ERBB2-202ENST00000406381 GNAT3A8MTJ3 354 aa15.01□□□□□ -0.01
ERBB2-202ENST00000406381 MYO6Q9UM54 1294 aa15.01□□□□□ -0.01
ERBB2-202ENST00000406381 SYT1P21579 422 aa15.01□□□□□ -0.01
ERBB2-202ENST00000406381 STIM1Q13586 685 aa15.01□□□□□ -0.01
ERBB2-202ENST00000406381 STK11IPQ8N1F8 1099 aa15.01□□□□□ -0.01
ERBB2-202ENST00000406381 C8orf58Q8NAV2 365 aa15.01□□□□□ -0.01
ERBB2-202ENST00000406381 SMARCC1Q92922 1105 aaPredicted RBP15.01□□□□□ -0.01
ERBB2-202ENST00000406381 BCL2L12Q9HB09 334 aa15.01□□□□□ -0.01
ERBB2-202ENST00000406381 TAF7Q15545 349 aaPredicted RBP15□□□□□ -0.01
ERBB2-202ENST00000406381 LUZP1Q86V48 1076 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 CCDC69A6NI79 296 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 GIMAP7Q8NHV1 300 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 ERO1AQ96HE7 468 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 FAM135AQ9P2D6 1515 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 IVLP07476 585 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 CEP85Q6P2H3 762 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 CENPHQ9H3R5 247 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 LUC7LQ9NQ29 371 aaKnown RBP15□□□□□ -0.01
ERBB2-202ENST00000406381 GTF2E1P29083 439 aaPredicted RBP15□□□□□ -0.01
ERBB2-202ENST00000406381 PPP1R42Q7Z4L9 355 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 ABTB2Q8N961 1025 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 TSC1Q92574 1164 aa15□□□□□ -0.01
ERBB2-202ENST00000406381 RHPN1Q8TCX5 695 aa14.99□□□□□ -0.01
ERBB2-202ENST00000406381 TRIM34Q9BYJ4 488 aa14.99□□□□□ -0.01
ERBB2-202ENST00000406381 NME9Q86XW9 330 aa14.99□□□□□ -0.01
ERBB2-202ENST00000406381 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.99□□□□□ -0.01
ERBB2-202ENST00000406381 RRP12Q5JTH9 1297 aaKnown RBP14.99□□□□□ -0.01
ERBB2-202ENST00000406381 VPS53Q5VIR6 699 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms