RNA–Protein interactions for RNA: ENST00000404616.2

AC007249.1-201, humanhuman

TSL 5 BASIC

Gene AC007249.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007249.1-201ENST00000404616 KCNQ3O43525 872 aa15.35■□□□□ 0.05
AC007249.1-201ENST00000404616 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
AC007249.1-201ENST00000404616 FHDC1Q9C0D6 1143 aaPredicted RBP15.35■□□□□ 0.05
AC007249.1-201ENST00000404616 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
AC007249.1-201ENST00000404616 KDM3BQ7LBC6 1761 aa15.34■□□□□ 0.05
AC007249.1-201ENST00000404616 A0A087WZG4 1122 aa15.34■□□□□ 0.05
AC007249.1-201ENST00000404616 MSL1Q68DK7 614 aa15.34■□□□□ 0.05
AC007249.1-201ENST00000404616 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
AC007249.1-201ENST00000404616 ZPR1O75312 459 aa15.33■□□□□ 0.04
AC007249.1-201ENST00000404616 GYS1P13807 737 aa15.33■□□□□ 0.04
AC007249.1-201ENST00000404616 IL6STP40189 918 aaPredicted RBP15.33■□□□□ 0.04
AC007249.1-201ENST00000404616 EIF5P55010 431 aaKnown RBP15.33■□□□□ 0.04
AC007249.1-201ENST00000404616 NEUROD2Q15784 382 aa15.33■□□□□ 0.04
AC007249.1-201ENST00000404616 NPM2Q86SE8 214 aaKnown RBP15.33■□□□□ 0.04
AC007249.1-201ENST00000404616 ZBTB1Q9Y2K1 713 aa15.33■□□□□ 0.04
AC007249.1-201ENST00000404616 CD2APQ9Y5K6 639 aa15.33■□□□□ 0.04
AC007249.1-201ENST00000404616 USP42Q9H9J4 1324 aaKnown RBP15.33■□□□□ 0.04
AC007249.1-201ENST00000404616 CANXP27824 592 aaKnown RBP15.32■□□□□ 0.04
AC007249.1-201ENST00000404616 THUMPD2Q9BTF0 503 aaKnown RBP15.32■□□□□ 0.04
AC007249.1-201ENST00000404616 MIS18AQ9NYP9 233 aa15.32■□□□□ 0.04
AC007249.1-201ENST00000404616 NARFQ9UHQ1 456 aa15.32■□□□□ 0.04
AC007249.1-201ENST00000404616 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
AC007249.1-201ENST00000404616 COL15A1P39059 1388 aa15.32■□□□□ 0.04
AC007249.1-201ENST00000404616 APAF1O14727 1248 aa15.31■□□□□ 0.04
AC007249.1-201ENST00000404616 EIF4A1P60842 406 aaKnown RBP15.31■□□□□ 0.04
AC007249.1-201ENST00000404616 CALD1Q05682 793 aaKnown RBP15.31■□□□□ 0.04
AC007249.1-201ENST00000404616 CCDC184Q52MB2 194 aa15.31■□□□□ 0.04
AC007249.1-201ENST00000404616 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
AC007249.1-201ENST00000404616 TSPYL4Q9UJ04 414 aa15.31■□□□□ 0.04
AC007249.1-201ENST00000404616 RRP7AQ9Y3A4 280 aaKnown RBP15.31■□□□□ 0.04
AC007249.1-201ENST00000404616 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
AC007249.1-201ENST00000404616 GIGYF1O75420 1035 aaPredicted RBP15.3■□□□□ 0.04
AC007249.1-201ENST00000404616 MMP10P09238 476 aa15.3■□□□□ 0.04
AC007249.1-201ENST00000404616 CHL1O00533 1208 aa15.29■□□□□ 0.04
AC007249.1-201ENST00000404616 A1BGP04217 495 aa15.29■□□□□ 0.04
AC007249.1-201ENST00000404616 PARP3Q9Y6F1 533 aa15.29■□□□□ 0.04
AC007249.1-201ENST00000404616 RGL2O15211 777 aa15.28■□□□□ 0.04
AC007249.1-201ENST00000404616 SRP68Q9UHB9 627 aaKnown RBP15.28■□□□□ 0.04
AC007249.1-201ENST00000404616 LAMB4A4D0S4 1761 aa15.28■□□□□ 0.04
AC007249.1-201ENST00000404616 TM4SF1P30408 202 aa15.27■□□□□ 0.04
AC007249.1-201ENST00000404616 FKBP8Q14318 412 aa15.27■□□□□ 0.04
AC007249.1-201ENST00000404616 CCDC27Q2M243 656 aa15.27■□□□□ 0.04
AC007249.1-201ENST00000404616 USPL1Q5W0Q7 1092 aa15.27■□□□□ 0.04
AC007249.1-201ENST00000404616 KLHL34Q8N239 644 aa15.27■□□□□ 0.04
AC007249.1-201ENST00000404616 CFAP44Q96MT7 982 aa15.27■□□□□ 0.04
AC007249.1-201ENST00000404616 ERBB4Q15303 1308 aa15.26■□□□□ 0.03
AC007249.1-201ENST00000404616 PRAMEF22A3QJZ6 481 aa15.26■□□□□ 0.03
AC007249.1-201ENST00000404616 KIF13BQ9NQT8 1826 aa15.26■□□□□ 0.03
AC007249.1-201ENST00000404616 NGEFQ8N5V2 710 aa15.25■□□□□ 0.03
AC007249.1-201ENST00000404616 TGFB2P61812 414 aa15.24■□□□□ 0.03
AC007249.1-201ENST00000404616 GNAI1P63096 354 aa15.24■□□□□ 0.03
AC007249.1-201ENST00000404616 CLEC4GQ6UXB4 293 aa15.24■□□□□ 0.03
AC007249.1-201ENST00000404616 DZIP3Q86Y13 1208 aaKnown RBP15.24■□□□□ 0.03
AC007249.1-201ENST00000404616 IFT57Q9NWB7 429 aa15.24■□□□□ 0.03
AC007249.1-201ENST00000404616 ZNF330Q9Y3S2 320 aaPredicted RBP15.24■□□□□ 0.03
AC007249.1-201ENST00000404616 NBPF26B4DH59 902 aa15.23■□□□□ 0.03
AC007249.1-201ENST00000404616 HOXB7P09629 217 aa15.23■□□□□ 0.03
AC007249.1-201ENST00000404616 ZNF853P0CG23 659 aa15.23■□□□□ 0.03
AC007249.1-201ENST00000404616 NBPF10Q6P3W6 841 aaKnown RBP15.23■□□□□ 0.03
AC007249.1-201ENST00000404616 NBPF15Q8N660 670 aa15.23■□□□□ 0.03
AC007249.1-201ENST00000404616 NLGN2Q8NFZ4 835 aa15.23■□□□□ 0.03
AC007249.1-201ENST00000404616 BCL2L12Q9HB09 334 aa15.23■□□□□ 0.03
AC007249.1-201ENST00000404616 TBC1D2BQ9UPU7 963 aa15.23■□□□□ 0.03
AC007249.1-201ENST00000404616 ZNF652Q9Y2D9 606 aa15.23■□□□□ 0.03
AC007249.1-201ENST00000404616 LAS1LQ9Y4W2 734 aaKnown RBP15.23■□□□□ 0.03
AC007249.1-201ENST00000404616 POLRMTO00411 1230 aaKnown RBP15.22■□□□□ 0.03
AC007249.1-201ENST00000404616 NFIXQ14938 502 aa15.22■□□□□ 0.03
AC007249.1-201ENST00000404616 CHMP4AQ9BY43 222 aa15.22■□□□□ 0.03
AC007249.1-201ENST00000404616 SCN7AQ01118 1682 aa15.22■□□□□ 0.03
AC007249.1-201ENST00000404616 C10orf71Q711Q0 1435 aa15.21■□□□□ 0.03
AC007249.1-201ENST00000404616 CAMTA2O94983 1202 aa15.21■□□□□ 0.03
AC007249.1-201ENST00000404616 DDR1Q08345 913 aa15.21■□□□□ 0.03
AC007249.1-201ENST00000404616 GPR162Q16538 588 aa15.21■□□□□ 0.03
AC007249.1-201ENST00000404616 AFDNP55196 1824 aaKnown RBP15.2■□□□□ 0.02
AC007249.1-201ENST00000404616 CHD4Q14839 1912 aa15.2■□□□□ 0.02
AC007249.1-201ENST00000404616 ERVV-1B6SEH8 477 aa15.2■□□□□ 0.02
AC007249.1-201ENST00000404616 CCER2I3L3R5 266 aa15.2■□□□□ 0.02
AC007249.1-201ENST00000404616 GRIN3BO60391 1043 aa15.2■□□□□ 0.02
AC007249.1-201ENST00000404616 WWC1Q8IX03 1113 aa15.2■□□□□ 0.02
AC007249.1-201ENST00000404616 SETDB2Q96T68 719 aa15.2■□□□□ 0.02
AC007249.1-201ENST00000404616 BCORQ6W2J9 1755 aa15.2■□□□□ 0.02
AC007249.1-201ENST00000404616 NRXN2Q9P2S2 1712 aa15.2■□□□□ 0.02
AC007249.1-201ENST00000404616 IL16Q14005 1332 aa15.19■□□□□ 0.02
AC007249.1-201ENST00000404616 SERPINB2P05120 415 aa15.19■□□□□ 0.02
AC007249.1-201ENST00000404616 PIP4K2AP48426 406 aaPredicted RBP15.19■□□□□ 0.02
AC007249.1-201ENST00000404616 FAM9BQ8IZU0 186 aa15.19■□□□□ 0.02
AC007249.1-201ENST00000404616 MBIPQ9NS73 344 aa15.19■□□□□ 0.02
AC007249.1-201ENST00000404616 EIF2S2P20042 333 aaKnown RBP15.18■□□□□ 0.02
AC007249.1-201ENST00000404616 TBC1D9BQ66K14 1250 aa15.18■□□□□ 0.02
AC007249.1-201ENST00000404616 WDR63Q8IWG1 891 aa15.18■□□□□ 0.02
AC007249.1-201ENST00000404616 PDZRN3Q9UPQ7 1066 aa15.18■□□□□ 0.02
AC007249.1-201ENST00000404616 CARMIL3Q8ND23 1372 aa15.18■□□□□ 0.02
AC007249.1-201ENST00000404616 KIF6Q6ZMV9 814 aa15.17■□□□□ 0.02
AC007249.1-201ENST00000404616 DDX21Q9NR30 783 aaKnown RBP eCLIP15.17■□□□□ 0.02
AC007249.1-201ENST00000404616 NUP98P52948 1817 aa15.17■□□□□ 0.02
AC007249.1-201ENST00000404616 MAP3K15Q6ZN16 1313 aa15.17■□□□□ 0.02
AC007249.1-201ENST00000404616 MYL6BP14649 208 aa15.16■□□□□ 0.02
AC007249.1-201ENST00000404616 PDIA6Q15084 440 aa15.16■□□□□ 0.02
AC007249.1-201ENST00000404616 DUSP27Q5VZP5 1158 aa15.16■□□□□ 0.02
AC007249.1-201ENST00000404616 BICDL1Q6ZP65 573 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms