RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 AKAP4Q5JQC9 854 aa24.33■■□□□ 1.49
HDAC11-204ENST00000404040 DNAJC10Q8IXB1 793 aa24.33■■□□□ 1.49
HDAC11-204ENST00000404040 C16orf71Q8IYS4 520 aaPredicted RBP24.33■■□□□ 1.49
HDAC11-204ENST00000404040 SLC52A2Q9HAB3 445 aa24.33■■□□□ 1.49
HDAC11-204ENST00000404040 ANKRD31Q8N7Z5 1873 aa24.32■■□□□ 1.48
HDAC11-204ENST00000404040 COL15A1P39059 1388 aa24.31■■□□□ 1.48
HDAC11-204ENST00000404040 SCN7AQ01118 1682 aa24.31■■□□□ 1.48
HDAC11-204ENST00000404040 ZPR1O75312 459 aa24.31■■□□□ 1.48
HDAC11-204ENST00000404040 USPL1Q5W0Q7 1092 aa24.31■■□□□ 1.48
HDAC11-204ENST00000404040 SIPA1L3O60292 1781 aaPredicted RBP24.3■■□□□ 1.48
HDAC11-204ENST00000404040 FSTL1Q12841 308 aa24.3■■□□□ 1.48
HDAC11-204ENST00000404040 KNSTRNQ9Y448 316 aa24.3■■□□□ 1.48
HDAC11-204ENST00000404040 DICER1Q9UPY3 1922 aaKnown RBP24.29■■□□□ 1.48
HDAC11-204ENST00000404040 CYP19A1P11511 503 aaPredicted RBP24.29■■□□□ 1.48
HDAC11-204ENST00000404040 PCNTO95613 3336 aa24.28■■□□□ 1.48
HDAC11-204ENST00000404040 LGR6Q9HBX8 967 aa24.28■■□□□ 1.48
HDAC11-204ENST00000404040 ZC3H4Q9UPT8 1303 aaKnown RBP24.28■■□□□ 1.48
HDAC11-204ENST00000404040 COL11A2P13942 1736 aaPredicted RBP24.27■■□□□ 1.48
HDAC11-204ENST00000404040 NFIXQ14938 502 aa24.27■■□□□ 1.48
HDAC11-204ENST00000404040 NARFQ9UHQ1 456 aa24.27■■□□□ 1.48
HDAC11-204ENST00000404040 RNMTO43148 476 aaKnown RBP24.26■■□□□ 1.47
HDAC11-204ENST00000404040 HTRA3P83110 453 aa24.26■■□□□ 1.47
HDAC11-204ENST00000404040 SLC39A6Q13433 755 aa24.26■■□□□ 1.47
HDAC11-204ENST00000404040 AMER1Q5JTC6 1135 aaPredicted RBP24.26■■□□□ 1.47
HDAC11-204ENST00000404040 KLRG1Q96E93 195 aa24.26■■□□□ 1.47
HDAC11-204ENST00000404040 ZBTB1Q9Y2K1 713 aa24.26■■□□□ 1.47
HDAC11-204ENST00000404040 CACNA1SQ13698 1873 aa24.26■■□□□ 1.47
HDAC11-204ENST00000404040 RASSF7Q02833 373 aa24.25■■□□□ 1.47
HDAC11-204ENST00000404040 RRAGCQ9HB90 399 aa24.25■■□□□ 1.47
HDAC11-204ENST00000404040 KIF7Q2M1P5 1343 aa24.25■■□□□ 1.47
HDAC11-204ENST00000404040 FER1L6Q2WGJ9 1857 aa24.25■■□□□ 1.47
HDAC11-204ENST00000404040 HMOX1P09601 288 aa24.23■■□□□ 1.47
HDAC11-204ENST00000404040 JMYQ8N9B5 988 aa24.23■■□□□ 1.47
HDAC11-204ENST00000404040 BCL2L12Q9HB09 334 aa24.23■■□□□ 1.47
HDAC11-204ENST00000404040 CARMIL3Q8ND23 1372 aa24.23■■□□□ 1.47
HDAC11-204ENST00000404040 VSIG10Q8N0Z9 540 aa24.22■■□□□ 1.47
HDAC11-204ENST00000404040 ARFGEF2Q9Y6D5 1785 aa24.21■■□□□ 1.47
HDAC11-204ENST00000404040 SMC1BQ8NDV3 1235 aa24.21■■□□□ 1.47
HDAC11-204ENST00000404040 BCORQ6W2J9 1755 aa24.21■■□□□ 1.47
HDAC11-204ENST00000404040 SERPINB2P05120 415 aa24.2■■□□□ 1.46
HDAC11-204ENST00000404040 LMNB1P20700 586 aa24.2■■□□□ 1.46
HDAC11-204ENST00000404040 MTHFSDQ2M296 383 aaKnown RBP24.2■■□□□ 1.46
HDAC11-204ENST00000404040 PRELPP51888 382 aa24.19■■□□□ 1.46
HDAC11-204ENST00000404040 COL3A1P02461 1466 aaPredicted RBP24.19■■□□□ 1.46
HDAC11-204ENST00000404040 TTLL6Q8N841 843 aa24.18■■□□□ 1.46
HDAC11-204ENST00000404040 GLTPD2A6NH11 291 aa24.16■■□□□ 1.46
HDAC11-204ENST00000404040 C2CD5Q86YS7 1000 aa24.16■■□□□ 1.46
HDAC11-204ENST00000404040 CANXP27824 592 aaKnown RBP24.15■■□□□ 1.46
HDAC11-204ENST00000404040 NFKBIEO00221 500 aa24.14■■□□□ 1.45
HDAC11-204ENST00000404040 DIAPH1O60610 1272 aaKnown RBP24.14■■□□□ 1.45
HDAC11-204ENST00000404040 EIF5P55010 431 aaKnown RBP24.14■■□□□ 1.45
HDAC11-204ENST00000404040 SLX4Q8IY92 1834 aa24.13■■□□□ 1.45
HDAC11-204ENST00000404040 H0YIN7 160 aa24.13■■□□□ 1.45
HDAC11-204ENST00000404040 STARD3NLO95772 234 aa24.13■■□□□ 1.45
HDAC11-204ENST00000404040 VEGFAP15692 232 aaPredicted RBP24.13■■□□□ 1.45
HDAC11-204ENST00000404040 TTC5Q8N0Z6 440 aa24.13■■□□□ 1.45
HDAC11-204ENST00000404040 A0A087WZG4 1122 aa24.12■■□□□ 1.45
HDAC11-204ENST00000404040 BICDL1Q6ZP65 573 aa24.12■■□□□ 1.45
HDAC11-204ENST00000404040 COL13A1Q5TAT6 717 aaPredicted RBP24.11■■□□□ 1.45
HDAC11-204ENST00000404040 HEG1Q9ULI3 1381 aa24.11■■□□□ 1.45
HDAC11-204ENST00000404040 TBC1D9BQ66K14 1250 aa24.1■■□□□ 1.45
HDAC11-204ENST00000404040 ZNF496Q96IT1 587 aaPredicted RBP24.09■■□□□ 1.45
HDAC11-204ENST00000404040 PER1O15534 1290 aaPredicted RBP24.08■■□□□ 1.45
HDAC11-204ENST00000404040 CC2D1BQ5T0F9 858 aaKnown RBP24.08■■□□□ 1.45
HDAC11-204ENST00000404040 ZNF790Q6PG37 636 aa24.07■■□□□ 1.44
HDAC11-204ENST00000404040 BRIP1Q9BX63 1249 aa24.07■■□□□ 1.44
HDAC11-204ENST00000404040 PDZRN3Q9UPQ7 1066 aa24.07■■□□□ 1.44
HDAC11-204ENST00000404040 ZNF316A6NFI3 1004 aaPredicted RBP24.06■■□□□ 1.44
HDAC11-204ENST00000404040 PDE6BP35913 854 aa24.06■■□□□ 1.44
HDAC11-204ENST00000404040 TEFQ10587 303 aa24.06■■□□□ 1.44
HDAC11-204ENST00000404040 PRR5LQ6MZQ0 368 aa24.06■■□□□ 1.44
HDAC11-204ENST00000404040 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
HDAC11-204ENST00000404040 GNAT3A8MTJ3 354 aa24.05■■□□□ 1.44
HDAC11-204ENST00000404040 POTECB2RU33 542 aa24.05■■□□□ 1.44
HDAC11-204ENST00000404040 GAS2L2Q8NHY3 880 aa24.05■■□□□ 1.44
HDAC11-204ENST00000404040 ZNF622Q969S3 477 aaKnown RBP eCLIP24.05■■□□□ 1.44
HDAC11-204ENST00000404040 TEX13AQ9BXU3 409 aaPredicted RBP24.05■■□□□ 1.44
HDAC11-204ENST00000404040 NPC1L1Q9UHC9 1359 aa24.04■■□□□ 1.44
HDAC11-204ENST00000404040 IL6STP40189 918 aaPredicted RBP24.04■■□□□ 1.44
HDAC11-204ENST00000404040 TBC1D2BQ9UPU7 963 aa24.04■■□□□ 1.44
HDAC11-204ENST00000404040 ZNF330Q9Y3S2 320 aaPredicted RBP24.04■■□□□ 1.44
HDAC11-204ENST00000404040 SCN4AP35499 1836 aa24.04■■□□□ 1.44
HDAC11-204ENST00000404040 CEMIPQ8WUJ3 1361 aa24.03■■□□□ 1.44
HDAC11-204ENST00000404040 C21orf2O43822 256 aa24.03■■□□□ 1.44
HDAC11-204ENST00000404040 CCDC24Q8N4L8 307 aa24.03■■□□□ 1.44
HDAC11-204ENST00000404040 LTBP3Q9NS15 1303 aa24.03■■□□□ 1.44
HDAC11-204ENST00000404040 U2SURPO15042 1029 aaKnown RBP24.02■■□□□ 1.44
HDAC11-204ENST00000404040 ERFEQ4G0M1 354 aa24.02■■□□□ 1.44
HDAC11-204ENST00000404040 DPY19L2Q6NUT2 758 aa24.02■■□□□ 1.44
HDAC11-204ENST00000404040 TNS4Q8IZW8 715 aa24.01■■□□□ 1.43
HDAC11-204ENST00000404040 CNBD1Q8NA66 436 aa24.01■■□□□ 1.43
HDAC11-204ENST00000404040 FMNL2Q96PY5 1086 aa24.01■■□□□ 1.43
HDAC11-204ENST00000404040 ZNF219Q9P2Y4 722 aaPredicted RBP24.01■■□□□ 1.43
HDAC11-204ENST00000404040 CAMTA2O94983 1202 aa24■■□□□ 1.43
HDAC11-204ENST00000404040 TAOK3Q9H2K8 898 aa24■■□□□ 1.43
HDAC11-204ENST00000404040 LAMB4A4D0S4 1761 aa23.99■■□□□ 1.43
HDAC11-204ENST00000404040 A1BGP04217 495 aa23.99■■□□□ 1.43
HDAC11-204ENST00000404040 HSPA1AP0DMV8 641 aaKnown RBP23.99■■□□□ 1.43
HDAC11-204ENST00000404040 HSPA1BP0DMV9 641 aaKnown RBP23.99■■□□□ 1.43
HDAC11-204ENST00000404040 SETDB2Q96T68 719 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms