RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	ADAMTS13	Q76LX8	1427 aa		10.26	□□□□□ -0.77
CEACAM1-208	ENST00000403461	TNFRSF10A	O00220	468 aa		10.26	□□□□□ -0.77
CEACAM1-208	ENST00000403461	BRINP3	Q76B58	766 aa		10.26	□□□□□ -0.77
CEACAM1-208	ENST00000403461	ARMC2	Q8NEN0	867 aa		10.26	□□□□□ -0.77
CEACAM1-208	ENST00000403461	UNC93B1	Q9H1C4	597 aa		10.26	□□□□□ -0.77
CEACAM1-208	ENST00000403461	GDPD2	Q9HCC8	539 aa		10.26	□□□□□ -0.77
CEACAM1-208	ENST00000403461	TBC1D2B	Q9UPU7	963 aa		10.26	□□□□□ -0.77
CEACAM1-208	ENST00000403461	DCC	P43146	1447 aa		10.25	□□□□□ -0.77
CEACAM1-208	ENST00000403461		A6NJR5	290 aa		10.25	□□□□□ -0.77
CEACAM1-208	ENST00000403461	DGAT1	O75907	488 aa		10.25	□□□□□ -0.77
CEACAM1-208	ENST00000403461	PLA2G2C	Q5R387	149 aa		10.25	□□□□□ -0.77
CEACAM1-208	ENST00000403461	POM121	Q96HA1	1249 aa		10.25	□□□□□ -0.77
CEACAM1-208	ENST00000403461	ZMYND15	Q9H091	742 aa		10.25	□□□□□ -0.77
CEACAM1-208	ENST00000403461	FKBPL	Q9UIM3	349 aa		10.25	□□□□□ -0.77
CEACAM1-208	ENST00000403461	COL16A1	Q07092	1604 aa	Predicted RBP	10.25	□□□□□ -0.77
CEACAM1-208	ENST00000403461	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.25	□□□□□ -0.77
CEACAM1-208	ENST00000403461	CFAP65	Q6ZU64	1925 aa	Known RBP	10.25	□□□□□ -0.77
CEACAM1-208	ENST00000403461	TRPM2	O94759	1503 aa		10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	ZBTB24	O43167	697 aa	Predicted RBP	10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	PRR20E	P86478	221 aa		10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	PRR20C	P86479	221 aa		10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	PRR20D	P86480	221 aa		10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	PRR20B	P86481	221 aa		10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	PRR20A	P86496	221 aa		10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	LRRC59	Q96AG4	307 aa	Known RBP	10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	CLUAP1	Q96AJ1	413 aa		10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	NUP155	O75694	1391 aa		10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	ROCK1	Q13464	1354 aa		10.24	□□□□□ -0.77
CEACAM1-208	ENST00000403461	FAM187A	A6NFU0	413 aa		10.23	□□□□□ -0.77
CEACAM1-208	ENST00000403461	ZNF326	Q5BKZ1	582 aa	Known RBP	10.23	□□□□□ -0.77
CEACAM1-208	ENST00000403461	AFF2	P51816	1311 aa		10.23	□□□□□ -0.77
CEACAM1-208	ENST00000403461	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.23	□□□□□ -0.77
CEACAM1-208	ENST00000403461	TMEM131L	A2VDJ0	1609 aa		10.22	□□□□□ -0.77
CEACAM1-208	ENST00000403461	GPR37L1	O60883	481 aa		10.22	□□□□□ -0.77
CEACAM1-208	ENST00000403461	RPIA	P49247	311 aa		10.22	□□□□□ -0.77
CEACAM1-208	ENST00000403461	MYT1	Q01538	1121 aa		10.22	□□□□□ -0.77
CEACAM1-208	ENST00000403461	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.22	□□□□□ -0.77
CEACAM1-208	ENST00000403461	C8orf37	Q96NL8	207 aa		10.22	□□□□□ -0.77
CEACAM1-208	ENST00000403461	ABL2	P42684	1182 aa		10.21	□□□□□ -0.77
CEACAM1-208	ENST00000403461	NBPF14	Q5TI25	921 aa		10.21	□□□□□ -0.77
CEACAM1-208	ENST00000403461	NGLY1	Q96IV0	654 aa		10.21	□□□□□ -0.77
CEACAM1-208	ENST00000403461	SETD5	Q9C0A6	1442 aa		10.21	□□□□□ -0.78
CEACAM1-208	ENST00000403461	RBM6	P78332	1123 aa	Known RBP	10.2	□□□□□ -0.78
CEACAM1-208	ENST00000403461	ASXL1	Q8IXJ9	1541 aa		10.2	□□□□□ -0.78
CEACAM1-208	ENST00000403461	ZNF775	Q96BV0	537 aa	Predicted RBP	10.2	□□□□□ -0.78
CEACAM1-208	ENST00000403461	SETD1A	O15047	1707 aa	Known RBP	10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	UNC13B	O14795	1591 aa		10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	MST1R	Q04912	1400 aa		10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	GDF9	O60383	454 aa		10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	ITGAE	P38570	1179 aa		10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	FOXC1	Q12948	553 aa		10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	TRIM32	Q13049	653 aa		10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	PDXDC2P	Q6P474	469 aa		10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	WWC1	Q8IX03	1113 aa		10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	BAP1	Q92560	729 aa		10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	QTRT2	Q9H974	415 aa	Known RBP	10.19	□□□□□ -0.78
CEACAM1-208	ENST00000403461	GCC2	Q8IWJ2	1684 aa		10.18	□□□□□ -0.78
CEACAM1-208	ENST00000403461	PTPRU	Q92729	1446 aa		10.18	□□□□□ -0.78
CEACAM1-208	ENST00000403461	CD2BP2	O95400	341 aa	Known RBP	10.18	□□□□□ -0.78
CEACAM1-208	ENST00000403461	IRF5	Q13568	498 aa		10.18	□□□□□ -0.78
CEACAM1-208	ENST00000403461	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.18	□□□□□ -0.78
CEACAM1-208	ENST00000403461	CHD2	O14647	1828 aa	Known RBP	10.18	□□□□□ -0.78
CEACAM1-208	ENST00000403461	SHPRH	Q149N8	1683 aa		10.18	□□□□□ -0.78
CEACAM1-208	ENST00000403461	ADGRL3	Q9HAR2	1447 aa		10.17	□□□□□ -0.78
CEACAM1-208	ENST00000403461	ZNF511	Q8NB15	262 aa		10.17	□□□□□ -0.78
CEACAM1-208	ENST00000403461	GPSM3	Q9Y4H4	160 aa		10.17	□□□□□ -0.78
CEACAM1-208	ENST00000403461	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.16	□□□□□ -0.78
CEACAM1-208	ENST00000403461	MET	P08581	1390 aa		10.16	□□□□□ -0.78
CEACAM1-208	ENST00000403461	ATAD2	Q6PL18	1390 aa		10.16	□□□□□ -0.78
CEACAM1-208	ENST00000403461	PNPLA6	Q8IY17	1366 aa		10.16	□□□□□ -0.78
CEACAM1-208	ENST00000403461	ADAMTS2	O95450	1211 aa		10.16	□□□□□ -0.78
CEACAM1-208	ENST00000403461	WASHC4	Q2M389	1173 aa		10.16	□□□□□ -0.78
CEACAM1-208	ENST00000403461	LINC01559	Q495D7	138 aa		10.16	□□□□□ -0.78
CEACAM1-208	ENST00000403461	RGS12	O14924	1447 aa		10.16	□□□□□ -0.78
CEACAM1-208	ENST00000403461	SETBP1	Q9Y6X0	1596 aa		10.15	□□□□□ -0.78
CEACAM1-208	ENST00000403461	TRAK2	O60296	914 aa		10.15	□□□□□ -0.78
CEACAM1-208	ENST00000403461	WNT7B	P56706	349 aa		10.15	□□□□□ -0.78
CEACAM1-208	ENST00000403461	PTK2	Q05397	1052 aa		10.15	□□□□□ -0.78
CEACAM1-208	ENST00000403461	TRPC5	Q9UL62	973 aa	Predicted RBP	10.15	□□□□□ -0.78
CEACAM1-208	ENST00000403461	IQGAP3	Q86VI3	1631 aa		10.15	□□□□□ -0.79
CEACAM1-208	ENST00000403461	ZBBX	A8MT70	800 aa		10.14	□□□□□ -0.79
CEACAM1-208	ENST00000403461	POTEC	B2RU33	542 aa		10.14	□□□□□ -0.79
CEACAM1-208	ENST00000403461	SH3BP2	P78314	561 aa		10.14	□□□□□ -0.79
CEACAM1-208	ENST00000403461	SH3BP5L	Q7L8J4	393 aa		10.14	□□□□□ -0.79
CEACAM1-208	ENST00000403461	USP21	Q9UK80	565 aa		10.14	□□□□□ -0.79
CEACAM1-208	ENST00000403461		E9PCH4	1651 aa		10.13	□□□□□ -0.79
CEACAM1-208	ENST00000403461	C1orf167	Q5SNV9	1468 aa		10.13	□□□□□ -0.79
CEACAM1-208	ENST00000403461	ST8SIA5	O15466	376 aa		10.13	□□□□□ -0.79
CEACAM1-208	ENST00000403461	NR1H3	Q13133	447 aa		10.13	□□□□□ -0.79
CEACAM1-208	ENST00000403461	BPHL	Q86WA6	291 aa	Predicted RBP	10.13	□□□□□ -0.79
CEACAM1-208	ENST00000403461	DDX17	Q92841	729 aa	Known RBP	10.13	□□□□□ -0.79
CEACAM1-208	ENST00000403461	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.13	□□□□□ -0.79
CEACAM1-208	ENST00000403461	PTCH1	Q13635	1447 aa		10.13	□□□□□ -0.79
CEACAM1-208	ENST00000403461	FBXO45	P0C2W1	286 aa		10.12	□□□□□ -0.79
CEACAM1-208	ENST00000403461	SKOR1	P84550	965 aa		10.12	□□□□□ -0.79
CEACAM1-208	ENST00000403461	SH3RF1	Q7Z6J0	888 aa		10.12	□□□□□ -0.79
CEACAM1-208	ENST00000403461	FOXJ1	Q92949	421 aa		10.12	□□□□□ -0.79
CEACAM1-208	ENST00000403461	ARHGAP9	Q9BRR9	750 aa		10.12	□□□□□ -0.79
CEACAM1-208	ENST00000403461	PKD2L1	Q9P0L9	805 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms