RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 USP32Q8NFA0 1604 aa15.29■□□□□ 0.04
PPP4R1-202ENST00000400555 PRAMEF22A3QJZ6 481 aa15.28■□□□□ 0.04
PPP4R1-202ENST00000400555 KLHDC4Q8TBB5 520 aa15.28■□□□□ 0.04
PPP4R1-202ENST00000400555 PREX1Q8TCU6 1659 aa15.28■□□□□ 0.04
PPP4R1-202ENST00000400555 SLC39A6Q13433 755 aa15.28■□□□□ 0.04
PPP4R1-202ENST00000400555 BOLA2Q9H3K6 86 aa15.28■□□□□ 0.04
PPP4R1-202ENST00000400555 CNPY2Q9Y2B0 182 aa15.28■□□□□ 0.04
PPP4R1-202ENST00000400555 THEMISQ8N1K5 641 aaPredicted RBP15.28■□□□□ 0.04
PPP4R1-202ENST00000400555 MAP3K2Q9Y2U5 619 aa15.28■□□□□ 0.04
PPP4R1-202ENST00000400555 SOS1Q07889 1333 aaPredicted RBP15.28■□□□□ 0.04
PPP4R1-202ENST00000400555 USP48Q86UV5 1035 aa15.27■□□□□ 0.04
PPP4R1-202ENST00000400555 PHF8Q9UPP1 1060 aa15.27■□□□□ 0.04
PPP4R1-202ENST00000400555 KIAA0232Q92628 1395 aa15.27■□□□□ 0.04
PPP4R1-202ENST00000400555 SYAP1Q96A49 352 aaPredicted RBP15.27■□□□□ 0.04
PPP4R1-202ENST00000400555 RIC3Q7Z5B4 369 aa15.27■□□□□ 0.03
PPP4R1-202ENST00000400555 KIF1BPQ96EK5 621 aa15.27■□□□□ 0.03
PPP4R1-202ENST00000400555 NLRP2Q9NX02 1062 aa15.27■□□□□ 0.03
PPP4R1-202ENST00000400555 USP6P35125 1406 aa15.26■□□□□ 0.03
PPP4R1-202ENST00000400555 TSPY26PQ9H489 355 aa15.26■□□□□ 0.03
PPP4R1-202ENST00000400555 G3BP1Q13283 466 aaKnown RBP eCLIP15.26■□□□□ 0.03
PPP4R1-202ENST00000400555 GOLGA6L4A6NEF3 574 aa15.26■□□□□ 0.03
PPP4R1-202ENST00000400555 RASEFQ8IZ41 740 aa15.26■□□□□ 0.03
PPP4R1-202ENST00000400555 NDUFB9Q9Y6M9 179 aa15.26■□□□□ 0.03
PPP4R1-202ENST00000400555 MCM2P49736 904 aa15.25■□□□□ 0.03
PPP4R1-202ENST00000400555 AK2P54819 239 aa15.25■□□□□ 0.03
PPP4R1-202ENST00000400555 FAM173BQ6P4H8 233 aa15.25■□□□□ 0.03
PPP4R1-202ENST00000400555 USP25Q9UHP3 1055 aa15.25■□□□□ 0.03
PPP4R1-202ENST00000400555 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
PPP4R1-202ENST00000400555 VIRMAQ69YN4 1812 aaKnown RBP15.25■□□□□ 0.03
PPP4R1-202ENST00000400555 GLIPR1L2Q4G1C9 344 aa15.25■□□□□ 0.03
PPP4R1-202ENST00000400555 MBD3O95983 291 aa15.24■□□□□ 0.03
PPP4R1-202ENST00000400555 PROSER3Q2NL68 480 aa15.24■□□□□ 0.03
PPP4R1-202ENST00000400555 FSD1Q9BTV5 496 aa15.24■□□□□ 0.03
PPP4R1-202ENST00000400555 SBNO1A3KN83 1393 aa15.24■□□□□ 0.03
PPP4R1-202ENST00000400555 SPC24Q8NBT2 197 aa15.24■□□□□ 0.03
PPP4R1-202ENST00000400555 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
PPP4R1-202ENST00000400555 TTC21AQ8NDW8 1320 aa15.24■□□□□ 0.03
PPP4R1-202ENST00000400555 CLTCQ00610 1675 aaKnown RBP15.24■□□□□ 0.03
PPP4R1-202ENST00000400555 A0A0G2JS52 829 aa15.23■□□□□ 0.03
PPP4R1-202ENST00000400555 WDR33Q9C0J8 1336 aaKnown RBP15.23■□□□□ 0.03
PPP4R1-202ENST00000400555 HCLS1P14317 486 aaPredicted RBP15.23■□□□□ 0.03
PPP4R1-202ENST00000400555 HSP90B1P14625 803 aaKnown RBP15.23■□□□□ 0.03
PPP4R1-202ENST00000400555 CEBPZQ03701 1054 aaKnown RBP15.23■□□□□ 0.03
PPP4R1-202ENST00000400555 CAMK4Q16566 473 aa15.23■□□□□ 0.03
PPP4R1-202ENST00000400555 LRSAM1Q6UWE0 723 aa15.23■□□□□ 0.03
PPP4R1-202ENST00000400555 CRB1P82279 1406 aa15.23■□□□□ 0.03
PPP4R1-202ENST00000400555 MAP3K5Q99683 1374 aa15.23■□□□□ 0.03
PPP4R1-202ENST00000400555 PLEKHO1Q53GL0 409 aaPredicted RBP15.23■□□□□ 0.03
PPP4R1-202ENST00000400555 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
PPP4R1-202ENST00000400555 GIMAP6Q6P9H5 292 aa15.22■□□□□ 0.03
PPP4R1-202ENST00000400555 FBXW7Q969H0 707 aa15.22■□□□□ 0.03
PPP4R1-202ENST00000400555 DNAJC2Q99543 621 aaKnown RBP15.22■□□□□ 0.03
PPP4R1-202ENST00000400555 PDRG1Q9NUG6 133 aa15.22■□□□□ 0.03
PPP4R1-202ENST00000400555 EDC3Q96F86 508 aaKnown RBP15.22■□□□□ 0.03
PPP4R1-202ENST00000400555 RGS12O14924 1447 aa15.22■□□□□ 0.03
PPP4R1-202ENST00000400555 IGSF1Q8N6C5 1336 aa15.22■□□□□ 0.03
PPP4R1-202ENST00000400555 TFIP11Q9UBB9 837 aaKnown RBP15.22■□□□□ 0.03
PPP4R1-202ENST00000400555 C17orf53Q8N3J3 647 aaPredicted RBP15.21■□□□□ 0.03
PPP4R1-202ENST00000400555 RUFY2Q8WXA3 655 aa15.21■□□□□ 0.03
PPP4R1-202ENST00000400555 ORAI2Q96SN7 254 aa15.21■□□□□ 0.03
PPP4R1-202ENST00000400555 SNX14Q9Y5W7 946 aa15.21■□□□□ 0.03
PPP4R1-202ENST00000400555 DRC7Q8IY82 874 aa15.21■□□□□ 0.03
PPP4R1-202ENST00000400555 ZNF445P59923 1031 aa15.21■□□□□ 0.03
PPP4R1-202ENST00000400555 PTH1RQ03431 593 aa15.21■□□□□ 0.03
PPP4R1-202ENST00000400555 KIF24Q5T7B8 1368 aa15.21■□□□□ 0.02
PPP4R1-202ENST00000400555 IBTKQ9P2D0 1353 aaPredicted RBP15.21■□□□□ 0.02
PPP4R1-202ENST00000400555 DNM1Q05193 864 aaKnown RBP15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 FAM227BQ96M60 508 aa15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 BRD1O95696 1058 aa15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 GJB2P29033 226 aa15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 OSBPL3Q9H4L5 887 aa15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 CYP46A1Q9Y6A2 500 aa15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 ATP5J2-PTCD1G3V325 749 aa15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 PTCD1O75127 700 aaKnown RBP15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 EIF4A1P60842 406 aaKnown RBP15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 ADCK5Q3MIX3 580 aa15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 LIMCH1Q9UPQ0 1083 aa15.2■□□□□ 0.02
PPP4R1-202ENST00000400555 STX6O43752 255 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 GLRX3O76003 335 aaKnown RBP15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 SYT1P21579 422 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 NEUROD6Q96NK8 337 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 RAB11FIP3O75154 756 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 CYP2E1P05181 493 aaPredicted RBP15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 KIAA2012Q0VF49 1180 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 HSP90AB4PQ58FF6 505 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 DDX11Q96FC9 970 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 SGSM2O43147 1006 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 LARGE1O95461 756 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 LARP1BQ659C4 914 aaKnown RBP15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 SSH3Q8TE77 659 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 SIRT1Q96EB6 747 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 LRRC2Q9BYS8 371 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 TTC12Q9H892 705 aaPredicted RBP15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 ARHGEF10O15013 1369 aa15.19■□□□□ 0.02
PPP4R1-202ENST00000400555 FAM177BA6PVY3 158 aa15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 PHF14O94880 888 aa15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 ECHDC1Q9NTX5 307 aa15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 DBF4Q9UBU7 674 aaPredicted RBP15.18■□□□□ 0.02
PPP4R1-202ENST00000400555 KIF20BQ96Q89 1820 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms