RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 SPATA31A5Q5VU36 1347 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 SPATA31A7Q8IWB4 1347 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 BCL9LQ86UU0 1499 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 BCORQ6W2J9 1755 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 ZBTB7CA1YPR0 619 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 GNAI3P08754 354 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 MTX1Q13505 466 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 FAM161AQ3B820 660 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 C8orf34Q49A92 452 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 CEP85Q6P2H3 762 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 PDZRN3Q9UPQ7 1066 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 SNRPA1P09661 255 aaKnown RBP8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 PDE4AP27815 886 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 BEND3Q5T5X7 828 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 FMNL2Q96PY5 1086 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 LAMB2P55268 1798 aa8.6□□□□□ -1.03
CX3CR1-202ENST00000399220 LY75O60449 1722 aa8.59□□□□□ -1.03
CX3CR1-202ENST00000399220 BTG4Q9NY30 223 aa8.59□□□□□ -1.03
CX3CR1-202ENST00000399220 SBF2Q86WG5 1849 aa8.59□□□□□ -1.03
CX3CR1-202ENST00000399220 KSR2Q6VAB6 950 aa8.59□□□□□ -1.03
CX3CR1-202ENST00000399220 FNBP4Q8N3X1 1017 aaPredicted RBP8.58□□□□□ -1.04
CX3CR1-202ENST00000399220 NFATC2IPQ8NCF5 419 aa8.58□□□□□ -1.04
CX3CR1-202ENST00000399220 POLA2Q14181 598 aa8.58□□□□□ -1.04
CX3CR1-202ENST00000399220 CHPF2Q9P2E5 772 aa8.58□□□□□ -1.04
CX3CR1-202ENST00000399220 DNAAF4Q8WXU2 420 aa8.58□□□□□ -1.04
CX3CR1-202ENST00000399220 HDAC5Q9UQL6 1122 aa8.58□□□□□ -1.04
CX3CR1-202ENST00000399220 GNAI2P04899 355 aa8.57□□□□□ -1.04
CX3CR1-202ENST00000399220 CABP4P57796 275 aa8.57□□□□□ -1.04
CX3CR1-202ENST00000399220 EVA1CP58658 441 aa8.57□□□□□ -1.04
CX3CR1-202ENST00000399220 ATP8B2P98198 1209 aa8.57□□□□□ -1.04
CX3CR1-202ENST00000399220 CHD1LQ86WJ1 897 aa8.57□□□□□ -1.04
CX3CR1-202ENST00000399220 USP44Q9H0E7 712 aa8.57□□□□□ -1.04
CX3CR1-202ENST00000399220 OSBPL3Q9H4L5 887 aa8.57□□□□□ -1.04
CX3CR1-202ENST00000399220 ZNF496Q96IT1 587 aaPredicted RBP8.57□□□□□ -1.04
CX3CR1-202ENST00000399220 TEX13AQ9BXU3 409 aaPredicted RBP8.57□□□□□ -1.04
CX3CR1-202ENST00000399220 SALL3Q9BXA9 1300 aa8.57□□□□□ -1.04
CX3CR1-202ENST00000399220 FKBP5Q13451 457 aaPredicted RBP8.56□□□□□ -1.04
CX3CR1-202ENST00000399220 VPS72Q15906 364 aa8.56□□□□□ -1.04
CX3CR1-202ENST00000399220 SSH3Q8TE77 659 aa8.56□□□□□ -1.04
CX3CR1-202ENST00000399220 MEIS3Q99687 375 aa8.56□□□□□ -1.04
CX3CR1-202ENST00000399220 PHAXQ9H814 394 aaKnown RBP8.56□□□□□ -1.04
CX3CR1-202ENST00000399220 RGL2O15211 777 aa8.56□□□□□ -1.04
CX3CR1-202ENST00000399220 HMMRO75330 724 aa8.56□□□□□ -1.04
CX3CR1-202ENST00000399220 DDX58O95786 925 aaKnown RBP8.56□□□□□ -1.04
CX3CR1-202ENST00000399220 SRCIN1Q9C0H9 1055 aa8.56□□□□□ -1.04
CX3CR1-202ENST00000399220 LINS1Q8NG48 757 aa8.56□□□□□ -1.04
CX3CR1-202ENST00000399220 AOX1Q06278 1338 aa8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 ATRNO75882 1429 aa8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 BMP2KLQ5H9B9 411 aa8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 TTC5Q8N0Z6 440 aa8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 CERKQ8TCT0 537 aa8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 NUP98P52948 1817 aa8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 TAF1LQ8IZX4 1826 aa8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 EIF5BO60841 1220 aaKnown RBP8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 PRKCSHP14314 528 aaPredicted RBP8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 NOP58Q9Y2X3 529 aaKnown RBP8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 SCN7AQ01118 1682 aa8.55□□□□□ -1.04
CX3CR1-202ENST00000399220 UNC5CLQ8IV45 518 aa8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 METTL22Q9BUU2 404 aaPredicted RBP8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 F6X3S4 739 aa8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 USP42Q9H9J4 1324 aaKnown RBP8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 BTAF1O14981 1849 aa8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 MYH3P11055 1940 aa8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 PI4KAP2A4QPH2 592 aa8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 RAB11FIP3O75154 756 aa8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 PROSER3Q2NL68 480 aa8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 PI4KAP1Q8N8J0 262 aa8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 PLBD2Q8NHP8 589 aa8.54□□□□□ -1.04
CX3CR1-202ENST00000399220 LRP5O75197 1615 aa8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 PRAMEF22A3QJZ6 481 aa8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 RGPD3A6NKT7 1758 aaPredicted RBP8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 ONECUT3O60422 494 aaPredicted RBP8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 COL24A1Q17RW2 1714 aa8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 RGPD4Q7Z3J3 1758 aa8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 STRN4Q9NRL3 753 aa8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 EXOC5O00471 708 aa8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 TRIM28Q13263 835 aaKnown RBP8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 STAP2Q9UGK3 403 aa8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 CASZ1Q86V15 1759 aa8.53□□□□□ -1.04
CX3CR1-202ENST00000399220 CASP7P55210 303 aa8.52□□□□□ -1.05
CX3CR1-202ENST00000399220 SLC39A6Q13433 755 aa8.52□□□□□ -1.05
CX3CR1-202ENST00000399220 ATG3Q9NT62 314 aa8.52□□□□□ -1.05
CX3CR1-202ENST00000399220 MAP3K2Q9Y2U5 619 aa8.52□□□□□ -1.05
CX3CR1-202ENST00000399220 USP16Q9Y5T5 823 aa8.52□□□□□ -1.05
CX3CR1-202ENST00000399220 AK9Q5TCS8 1911 aa8.52□□□□□ -1.05
CX3CR1-202ENST00000399220 RABL6Q3YEC7 729 aaPredicted RBP8.52□□□□□ -1.05
CX3CR1-202ENST00000399220 PIGBQ92521 554 aa8.52□□□□□ -1.05
CX3CR1-202ENST00000399220 TMOD3Q9NYL9 352 aa8.52□□□□□ -1.05
CX3CR1-202ENST00000399220 ARAP2Q8WZ64 1704 aa8.52□□□□□ -1.05
CX3CR1-202ENST00000399220 NBPF26B4DH59 902 aa8.51□□□□□ -1.05
CX3CR1-202ENST00000399220 UBAP1LF5GYI3 381 aa8.51□□□□□ -1.05
CX3CR1-202ENST00000399220 IGKV5-2P06315 115 aa8.51□□□□□ -1.05
CX3CR1-202ENST00000399220 UBTFL1P0CB47 393 aaPredicted RBP8.51□□□□□ -1.05
CX3CR1-202ENST00000399220 EIF2S2P20042 333 aaKnown RBP8.51□□□□□ -1.05
CX3CR1-202ENST00000399220 NBPF14Q5TI25 921 aa8.51□□□□□ -1.05
CX3CR1-202ENST00000399220 NBPF10Q6P3W6 841 aaKnown RBP8.51□□□□□ -1.05
CX3CR1-202ENST00000399220 NBPF15Q8N660 670 aa8.51□□□□□ -1.05
CX3CR1-202ENST00000399220 SPEF2Q9C093 1822 aa8.51□□□□□ -1.05
CX3CR1-202ENST00000399220 NEURL1BA8MQ27 555 aa8.51□□□□□ -1.05
CX3CR1-202ENST00000399220 PLEKHM2Q8IWE5 1019 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms