RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 CTAGE5O15320 804 aa13.43□□□□□ -0.26
HLCS-202ENST00000399120 PRC1O43663 620 aa13.43□□□□□ -0.26
HLCS-202ENST00000399120 SPTY2D1Q68D10 685 aaPredicted RBP13.43□□□□□ -0.26
HLCS-202ENST00000399120 CNNM3Q8NE01 707 aa13.43□□□□□ -0.26
HLCS-202ENST00000399120 SCAPERQ9BY12 1400 aa13.43□□□□□ -0.26
HLCS-202ENST00000399120 CCDC40Q4G0X9 1142 aa13.43□□□□□ -0.26
HLCS-202ENST00000399120 A0A1W2PRG0 241 aa13.43□□□□□ -0.26
HLCS-202ENST00000399120 ZNF444Q8N0Y2 327 aaPredicted RBP13.43□□□□□ -0.26
HLCS-202ENST00000399120 LRRC45Q96CN5 670 aa13.43□□□□□ -0.26
HLCS-202ENST00000399120 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
HLCS-202ENST00000399120 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
HLCS-202ENST00000399120 NAPBQ9H115 298 aa13.43□□□□□ -0.26
HLCS-202ENST00000399120 TRMT1Q9NXH9 659 aaKnown RBP13.43□□□□□ -0.26
HLCS-202ENST00000399120 CCDC88BA6NC98 1476 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 TIGD1Q96MW7 591 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 MXRA7P84157 204 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 TCERG1LQ5VWI1 586 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 STXBP4Q6ZWJ1 553 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 TTC16Q8NEE8 873 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 PUF60Q9UHX1 559 aaKnown RBP13.42□□□□□ -0.26
HLCS-202ENST00000399120 CCDC194A0A1B0GVG4 234 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 NEMFO60524 1076 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 NLRP5P59047 1200 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 SSRP1Q08945 709 aaKnown RBP13.42□□□□□ -0.26
HLCS-202ENST00000399120 NUTM1Q86Y26 1132 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 CCDC155Q8N6L0 562 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 CCDC6Q16204 474 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 DZIP1Q86YF9 867 aaKnown RBP13.42□□□□□ -0.26
HLCS-202ENST00000399120 TTC21AQ8NDW8 1320 aa13.42□□□□□ -0.26
HLCS-202ENST00000399120 A0A087WZG4 1122 aa13.41□□□□□ -0.26
HLCS-202ENST00000399120 HSF2BPO75031 334 aa13.41□□□□□ -0.26
HLCS-202ENST00000399120 HMGB2P26583 209 aaKnown RBP13.41□□□□□ -0.26
HLCS-202ENST00000399120 ARL1P40616 181 aaPredicted RBP13.41□□□□□ -0.26
HLCS-202ENST00000399120 AMPD3Q01432 767 aa13.41□□□□□ -0.26
HLCS-202ENST00000399120 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.41□□□□□ -0.26
HLCS-202ENST00000399120 V9GYY5 206 aaPredicted RBP13.41□□□□□ -0.26
HLCS-202ENST00000399120 FAM114A1Q8IWE2 563 aa13.41□□□□□ -0.26
HLCS-202ENST00000399120 CALML4Q96GE6 196 aa13.41□□□□□ -0.26
HLCS-202ENST00000399120 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
HLCS-202ENST00000399120 IQCA1Q86XH1 822 aa13.41□□□□□ -0.26
HLCS-202ENST00000399120 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
HLCS-202ENST00000399120 GSDMDP57764 484 aa13.41□□□□□ -0.26
HLCS-202ENST00000399120 WDR63Q8IWG1 891 aa13.41□□□□□ -0.26
HLCS-202ENST00000399120 BACH2Q9BYV9 841 aa13.41□□□□□ -0.26
HLCS-202ENST00000399120 TTLL12Q14166 644 aaPredicted RBP13.4□□□□□ -0.26
HLCS-202ENST00000399120 IFI16Q16666 785 aaKnown RBP13.4□□□□□ -0.26
HLCS-202ENST00000399120 APBB1IPQ7Z5R6 666 aaPredicted RBP13.4□□□□□ -0.26
HLCS-202ENST00000399120 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
HLCS-202ENST00000399120 RANBP6O60518 1105 aaKnown RBP13.4□□□□□ -0.26
HLCS-202ENST00000399120 CKAP4Q07065 602 aaKnown RBP13.4□□□□□ -0.26
HLCS-202ENST00000399120 PRPF40BQ6NWY9 871 aaKnown RBP13.4□□□□□ -0.26
HLCS-202ENST00000399120 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
HLCS-202ENST00000399120 GOLGA6L9A6NEM1 432 aa13.4□□□□□ -0.26
HLCS-202ENST00000399120 CCDC160A6NGH7 325 aa13.4□□□□□ -0.26
HLCS-202ENST00000399120 GUCY1B3Q02153 619 aa13.4□□□□□ -0.26
HLCS-202ENST00000399120 SYCP3Q8IZU3 236 aa13.4□□□□□ -0.26
HLCS-202ENST00000399120 HSPA4P34932 840 aa13.4□□□□□ -0.26
HLCS-202ENST00000399120 IQCGQ9H095 443 aaKnown RBP13.4□□□□□ -0.26
HLCS-202ENST00000399120 CECR2Q9BXF3 1484 aa13.4□□□□□ -0.26
HLCS-202ENST00000399120 KIAA0753Q2KHM9 967 aa13.4□□□□□ -0.26
HLCS-202ENST00000399120 RPAP2Q8IXW5 612 aaPredicted RBP13.4□□□□□ -0.26
HLCS-202ENST00000399120 NSRP1Q9H0G5 558 aaKnown RBP13.4□□□□□ -0.26
HLCS-202ENST00000399120 SH2B1Q9NRF2 756 aaPredicted RBP13.4□□□□□ -0.26
HLCS-202ENST00000399120 STARD3NLO95772 234 aa13.39□□□□□ -0.27
HLCS-202ENST00000399120 HMGB1P09429 215 aaKnown RBP13.39□□□□□ -0.27
HLCS-202ENST00000399120 TXNDC2Q86VQ3 553 aa13.39□□□□□ -0.27
HLCS-202ENST00000399120 MYOM3Q5VTT5 1437 aa13.39□□□□□ -0.27
HLCS-202ENST00000399120 TMC6Q7Z403 805 aa13.39□□□□□ -0.27
HLCS-202ENST00000399120 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
HLCS-202ENST00000399120 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
HLCS-202ENST00000399120 JADE2Q9NQC1 790 aa13.39□□□□□ -0.27
HLCS-202ENST00000399120 ATP2C2O75185 946 aa13.39□□□□□ -0.27
HLCS-202ENST00000399120 NAP1L3Q99457 506 aaPredicted RBP13.39□□□□□ -0.27
HLCS-202ENST00000399120 GLRX3O76003 335 aaKnown RBP13.39□□□□□ -0.27
HLCS-202ENST00000399120 C16orf45Q96MC5 204 aaPredicted RBP13.39□□□□□ -0.27
HLCS-202ENST00000399120 PRAM1Q96QH2 718 aa13.39□□□□□ -0.27
HLCS-202ENST00000399120 MNAT1P51948 309 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 RAB11FIP3O75154 756 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 FAM69CQ0P6D2 419 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 TCP11L1Q9NUJ3 509 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 CCDC82Q8N4S0 544 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 DNAAF4Q8WXU2 420 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 ANAPC4Q9UJX5 808 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 PAXIP1Q6ZW49 1069 aaPredicted RBP13.38□□□□□ -0.27
HLCS-202ENST00000399120 ZNF354CQ86Y25 554 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 PLVAPQ9BX97 442 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 GOLGA8AA7E2F4 631 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
HLCS-202ENST00000399120 RNF41Q9H4P4 317 aaPredicted RBP13.38□□□□□ -0.27
HLCS-202ENST00000399120 PLEKHH1Q9ULM0 1364 aa13.37□□□□□ -0.27
HLCS-202ENST00000399120 NDC80O14777 642 aa13.37□□□□□ -0.27
HLCS-202ENST00000399120 PAIP2Q9BPZ3 127 aaKnown RBP13.37□□□□□ -0.27
HLCS-202ENST00000399120 ZNF213O14771 459 aa13.37□□□□□ -0.27
HLCS-202ENST00000399120 CATIPQ7Z7H3 387 aa13.37□□□□□ -0.27
HLCS-202ENST00000399120 FSIP1Q8NA03 581 aa13.37□□□□□ -0.27
HLCS-202ENST00000399120 MYO1BO43795 1136 aa13.37□□□□□ -0.27
HLCS-202ENST00000399120 KIF4AO95239 1232 aa13.37□□□□□ -0.27
HLCS-202ENST00000399120 SNW1Q13573 536 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms