RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 ZWINTO95229 277 aa13.24□□□□□ -0.29
SLC38A1-201ENST00000398637 EIF6P56537 245 aaKnown RBP13.24□□□□□ -0.29
SLC38A1-201ENST00000398637 ALS2CR12Q96Q35 445 aa13.24□□□□□ -0.29
SLC38A1-201ENST00000398637 NDC80O14777 642 aa13.24□□□□□ -0.29
SLC38A1-201ENST00000398637 CCP110O43303 1012 aa13.24□□□□□ -0.29
SLC38A1-201ENST00000398637 SP4Q02446 784 aa13.24□□□□□ -0.29
SLC38A1-201ENST00000398637 KRT28Q7Z3Y7 464 aa13.24□□□□□ -0.29
SLC38A1-201ENST00000398637 PANK1Q8TE04 598 aa13.24□□□□□ -0.29
SLC38A1-201ENST00000398637 KIF4AO95239 1232 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 GTF3C6Q969F1 213 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 FYCO1Q9BQS8 1478 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 TSPY2A6NKD2 308 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 TNNI2P48788 182 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 CCDC178Q5BJE1 867 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 HAUS7Q99871 368 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 CATIPQ7Z7H3 387 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 STXBP4Q6ZWJ1 553 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 DNA2P51530 1060 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 BBXQ8WY36 941 aaPredicted RBP13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
SLC38A1-201ENST00000398637 CEBPAP49715 358 aaPredicted RBP13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 CFAP70Q5T0N1 1121 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 CCDC194A0A1B0GVG4 234 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 GSTO1P78417 241 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 ACTN2P35609 894 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 PDE4BQ07343 736 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 STX6O43752 255 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 CCDC175P0C221 793 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 RNF214Q8ND24 703 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 ZBTB3Q9H5J0 574 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 SPC24Q8NBT2 197 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 ODF2LQ9ULJ1 636 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 KAT14Q9H8E8 782 aa13.22□□□□□ -0.29
SLC38A1-201ENST00000398637 FKBP15Q5T1M5 1219 aa13.21□□□□□ -0.29
SLC38A1-201ENST00000398637 CNTLNQ9NXG0 1405 aa13.21□□□□□ -0.29
SLC38A1-201ENST00000398637 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
SLC38A1-201ENST00000398637 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
SLC38A1-201ENST00000398637 TMOD4Q9NZQ9 345 aa13.21□□□□□ -0.29
SLC38A1-201ENST00000398637 BCAR3O75815 825 aa13.21□□□□□ -0.29
SLC38A1-201ENST00000398637 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
SLC38A1-201ENST00000398637 BLOC1S2Q6QNY1 142 aa13.21□□□□□ -0.29
SLC38A1-201ENST00000398637 MYCP01106 439 aaPredicted RBP13.21□□□□□ -0.3
SLC38A1-201ENST00000398637 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.3
SLC38A1-201ENST00000398637 IQCEQ6IPM2 695 aa13.21□□□□□ -0.3
SLC38A1-201ENST00000398637 KLHL10Q6JEL2 608 aa13.21□□□□□ -0.3
SLC38A1-201ENST00000398637 CCDC7Q96M83 1385 aa13.21□□□□□ -0.3
SLC38A1-201ENST00000398637 SERPINA10Q9UK55 444 aa13.21□□□□□ -0.3
SLC38A1-201ENST00000398637 GINS2Q9Y248 185 aa13.21□□□□□ -0.3
SLC38A1-201ENST00000398637 RTCBQ9Y3I0 505 aaKnown RBP13.21□□□□□ -0.3
SLC38A1-201ENST00000398637 SLC12A7Q9Y666 1083 aa13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 MAP2K1Q02750 393 aaPredicted RBP13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 PRPF31Q8WWY3 499 aaKnown RBP13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 DDB1Q16531 1140 aa13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 CNGA1P29973 690 aa13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 CCDC196A0A1B0GTZ2 297 aa13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 CADPS2Q86UW7 1296 aa13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 STX8Q9UNK0 236 aa13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 GAPVD1Q14C86 1478 aa13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 FGFR1OPO95684 399 aaKnown RBP13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 ZBTB21Q9ULJ3 1066 aa13.2□□□□□ -0.3
SLC38A1-201ENST00000398637 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 SNX16P57768 344 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 TSPY3P0CV98 308 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 TSPY8P0CW00 308 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 CCDC12Q8WUD4 166 aaPredicted RBP13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 NOB1Q9ULX3 412 aaKnown RBP13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 SPA17Q15506 151 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 LARP1BQ659C4 914 aaKnown RBP13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 DDX11Q96FC9 970 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 C22orf23Q9BZE7 217 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 TNMDQ9H2S6 317 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 CEP83Q9Y592 693 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 LETM1O95202 739 aaPredicted RBP13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 EXOC6Q8TAG9 804 aa13.19□□□□□ -0.3
SLC38A1-201ENST00000398637 CCDC152Q4G0S7 254 aa13.18□□□□□ -0.3
SLC38A1-201ENST00000398637 FAM200AQ8TCP9 573 aa13.18□□□□□ -0.3
SLC38A1-201ENST00000398637 KIAA0754O94854 1291 aa13.18□□□□□ -0.3
SLC38A1-201ENST00000398637 CCDC88BA6NC98 1476 aa13.18□□□□□ -0.3
SLC38A1-201ENST00000398637 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
SLC38A1-201ENST00000398637 ARID5AQ03989 594 aa13.18□□□□□ -0.3
SLC38A1-201ENST00000398637 AKNAD1Q5T1N1 836 aa13.18□□□□□ -0.3
SLC38A1-201ENST00000398637 ZBTB33Q86T24 672 aa13.18□□□□□ -0.3
SLC38A1-201ENST00000398637 IL1RAPL2Q9NP60 686 aa13.18□□□□□ -0.3
SLC38A1-201ENST00000398637 VPS8Q8N3P4 1428 aa13.18□□□□□ -0.3
SLC38A1-201ENST00000398637 EIF3JO75822 258 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 ZNF804AQ7Z570 1209 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 TRIM6Q9C030 488 aaPredicted RBP13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 RNF41Q9H4P4 317 aaPredicted RBP13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 FCHSD2O94868 740 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 KIF5BP33176 963 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 CCDC144CPQ8IYA2 1237 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 PPP1R14CQ8TAE6 165 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 SPC25Q9HBM1 224 aa13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 IFIT3O14879 490 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 TBCAO75347 108 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-201ENST00000398637 BAG6P46379 1132 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms