RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 KCNQ4P56696 695 aa23.26■■□□□ 1.31
MBD1-208ENST00000398493 TWISTNBQ3B726 338 aaPredicted RBP23.26■■□□□ 1.31
MBD1-208ENST00000398493 TNNQ9UQP3 1299 aa23.26■■□□□ 1.31
MBD1-208ENST00000398493 PLSCR1O15162 318 aa23.24■■□□□ 1.31
MBD1-208ENST00000398493 SF3B2Q13435 895 aaKnown RBP23.24■■□□□ 1.31
MBD1-208ENST00000398493 CCDC125Q86Z20 511 aa23.24■■□□□ 1.31
MBD1-208ENST00000398493 ARHGAP45Q92619 1136 aa23.24■■□□□ 1.31
MBD1-208ENST00000398493 ZNF496Q96IT1 587 aaPredicted RBP23.24■■□□□ 1.31
MBD1-208ENST00000398493 TTC5Q8N0Z6 440 aa23.24■■□□□ 1.31
MBD1-208ENST00000398493 SMARCC1Q92922 1105 aaPredicted RBP23.24■■□□□ 1.31
MBD1-208ENST00000398493 RBM42Q9BTD8 480 aaKnown RBP23.24■■□□□ 1.31
MBD1-208ENST00000398493 RWDD1Q9H446 243 aaPredicted RBP23.24■■□□□ 1.31
MBD1-208ENST00000398493 EZH2Q15910 746 aaKnown RBP23.23■■□□□ 1.31
MBD1-208ENST00000398493 CAMKK2Q96RR4 588 aa23.23■■□□□ 1.31
MBD1-208ENST00000398493 CHMP4BQ9H444 224 aaKnown RBP23.23■■□□□ 1.31
MBD1-208ENST00000398493 PAPPAQ13219 1627 aa23.23■■□□□ 1.31
MBD1-208ENST00000398493 KCPQ6ZWJ8 1503 aa23.22■■□□□ 1.31
MBD1-208ENST00000398493 EIF4A1P60842 406 aaKnown RBP23.22■■□□□ 1.31
MBD1-208ENST00000398493 KRT24Q2M2I5 525 aa23.22■■□□□ 1.31
MBD1-208ENST00000398493 BABAM1Q9NWV8 329 aa23.22■■□□□ 1.31
MBD1-208ENST00000398493 LOC102724428A0A0B4J2F2 783 aa23.22■■□□□ 1.31
MBD1-208ENST00000398493 IGHDP01880 384 aa23.22■■□□□ 1.31
MBD1-208ENST00000398493 SIK1P57059 783 aa23.22■■□□□ 1.31
MBD1-208ENST00000398493 MRPL50Q8N5N7 158 aaKnown RBP23.22■■□□□ 1.31
MBD1-208ENST00000398493 LRRC4BQ9NT99 713 aa23.22■■□□□ 1.31
MBD1-208ENST00000398493 PRAMEF22A3QJZ6 481 aa23.21■■□□□ 1.31
MBD1-208ENST00000398493 PDE4AP27815 886 aa23.21■■□□□ 1.31
MBD1-208ENST00000398493 ITPRIPQ8IWB1 547 aa23.21■■□□□ 1.31
MBD1-208ENST00000398493 TSPYL6Q8N831 410 aa23.21■■□□□ 1.31
MBD1-208ENST00000398493 TXNRD1Q16881 649 aa23.2■■□□□ 1.3
MBD1-208ENST00000398493 KDM3BQ7LBC6 1761 aa23.19■■□□□ 1.3
MBD1-208ENST00000398493 ELL2O00472 640 aaPredicted RBP23.19■■□□□ 1.3
MBD1-208ENST00000398493 BAG6P46379 1132 aa23.19■■□□□ 1.3
MBD1-208ENST00000398493 C8orf58Q8NAV2 365 aa23.19■■□□□ 1.3
MBD1-208ENST00000398493 ANP32EQ9BTT0 268 aa23.19■■□□□ 1.3
MBD1-208ENST00000398493 ITPK1Q13572 414 aa23.19■■□□□ 1.3
MBD1-208ENST00000398493 ATP6V1AP38606 617 aa23.18■■□□□ 1.3
MBD1-208ENST00000398493 FMNL2Q96PY5 1086 aa23.18■■□□□ 1.3
MBD1-208ENST00000398493 BACH2Q9BYV9 841 aa23.18■■□□□ 1.3
MBD1-208ENST00000398493 CCNL1Q9UK58 526 aaPredicted RBP23.18■■□□□ 1.3
MBD1-208ENST00000398493 PCDHB15Q9Y5E8 787 aa23.17■■□□□ 1.3
MBD1-208ENST00000398493 HEG1Q9ULI3 1381 aa23.17■■□□□ 1.3
MBD1-208ENST00000398493 TMEM57Q8N5G2 664 aa23.17■■□□□ 1.3
MBD1-208ENST00000398493 UBR2Q8IWV8 1755 aa23.16■■□□□ 1.3
MBD1-208ENST00000398493 API5Q9BZZ5 524 aaKnown RBP23.16■■□□□ 1.3
MBD1-208ENST00000398493 LY75O60449 1722 aa23.15■■□□□ 1.3
MBD1-208ENST00000398493 DNAJC10Q8IXB1 793 aa23.15■■□□□ 1.3
MBD1-208ENST00000398493 GIGYF1O75420 1035 aaPredicted RBP23.15■■□□□ 1.3
MBD1-208ENST00000398493 USP16Q9Y5T5 823 aa23.15■■□□□ 1.3
MBD1-208ENST00000398493 ANP32AP39687 249 aaKnown RBP23.14■■□□□ 1.29
MBD1-208ENST00000398493 SLC27A3Q5K4L6 730 aa23.13■■□□□ 1.29
MBD1-208ENST00000398493 VSIG10Q8N0Z9 540 aa23.13■■□□□ 1.29
MBD1-208ENST00000398493 LINC00116Q8NCU8 138 aa23.13■■□□□ 1.29
MBD1-208ENST00000398493 SNRPA1P09661 255 aaKnown RBP23.12■■□□□ 1.29
MBD1-208ENST00000398493 RGS3P49796 1198 aa23.12■■□□□ 1.29
MBD1-208ENST00000398493 SKAP1Q86WV1 359 aa23.11■■□□□ 1.29
MBD1-208ENST00000398493 ZBTB40Q9NUA8 1239 aa23.1■■□□□ 1.29
MBD1-208ENST00000398493 HDAC1Q13547 482 aaPredicted RBP23.1■■□□□ 1.29
MBD1-208ENST00000398493 RGPD3A6NKT7 1758 aaPredicted RBP23.09■■□□□ 1.29
MBD1-208ENST00000398493 RGPD4Q7Z3J3 1758 aa23.09■■□□□ 1.29
MBD1-208ENST00000398493 CYP19A1P11511 503 aaPredicted RBP23.09■■□□□ 1.29
MBD1-208ENST00000398493 FAM161AQ3B820 660 aa23.08■■□□□ 1.29
MBD1-208ENST00000398493 TJP1Q07157 1748 aa23.08■■□□□ 1.29
MBD1-208ENST00000398493 NECTIN2Q92692 538 aa23.08■■□□□ 1.28
MBD1-208ENST00000398493 EIF2S2P20042 333 aaKnown RBP23.07■■□□□ 1.28
MBD1-208ENST00000398493 PIP4K2AP48426 406 aaPredicted RBP23.07■■□□□ 1.28
MBD1-208ENST00000398493 ANO8Q9HCE9 1232 aaPredicted RBP23.07■■□□□ 1.28
MBD1-208ENST00000398493 ABCC4O15439 1325 aa23.07■■□□□ 1.28
MBD1-208ENST00000398493 C5P01031 1676 aa23.06■■□□□ 1.28
MBD1-208ENST00000398493 SMIM5Q71RC9 77 aa23.06■■□□□ 1.28
MBD1-208ENST00000398493 SOS1Q07889 1333 aaPredicted RBP23.06■■□□□ 1.28
MBD1-208ENST00000398493 A1BGP04217 495 aa23.05■■□□□ 1.28
MBD1-208ENST00000398493 CRKLP46109 303 aaKnown RBP23.05■■□□□ 1.28
MBD1-208ENST00000398493 ZNF827Q17R98 1081 aa23.05■■□□□ 1.28
MBD1-208ENST00000398493 INTS5Q6P9B9 1019 aaKnown RBP23.05■■□□□ 1.28
MBD1-208ENST00000398493 AMIGO3Q86WK7 504 aa23.05■■□□□ 1.28
MBD1-208ENST00000398493 TEX13AQ9BXU3 409 aaPredicted RBP23.05■■□□□ 1.28
MBD1-208ENST00000398493 ZNF831Q5JPB2 1677 aa23.05■■□□□ 1.28
MBD1-208ENST00000398493 RREB1Q92766 1687 aa23.05■■□□□ 1.28
MBD1-208ENST00000398493 PTPRCP08575 1304 aa23.05■■□□□ 1.28
MBD1-208ENST00000398493 ZBTB7BO15156 539 aaPredicted RBP23.04■■□□□ 1.28
MBD1-208ENST00000398493 ZBTB1Q9Y2K1 713 aa23.04■■□□□ 1.28
MBD1-208ENST00000398493 STARD3NLO95772 234 aa23.03■■□□□ 1.28
MBD1-208ENST00000398493 AKT1S1Q96B36 256 aa23.03■■□□□ 1.28
MBD1-208ENST00000398493 PDZRN3Q9UPQ7 1066 aa23.03■■□□□ 1.28
MBD1-208ENST00000398493 CICQ96RK0 1608 aaPredicted RBP23.03■■□□□ 1.28
MBD1-208ENST00000398493 TAF1LQ8IZX4 1826 aa23.03■■□□□ 1.28
MBD1-208ENST00000398493 HOXB7P09629 217 aa23.03■■□□□ 1.28
MBD1-208ENST00000398493 NBPF26B4DH59 902 aa23.02■■□□□ 1.28
MBD1-208ENST00000398493 HDGFL1Q5TGJ6 251 aa23.02■■□□□ 1.28
MBD1-208ENST00000398493 NBPF14Q5TI25 921 aa23.02■■□□□ 1.28
MBD1-208ENST00000398493 NBPF10Q6P3W6 841 aaKnown RBP23.02■■□□□ 1.28
MBD1-208ENST00000398493 NBPF15Q8N660 670 aa23.02■■□□□ 1.28
MBD1-208ENST00000398493 MYH14Q7Z406 1995 aaKnown RBP23.02■■□□□ 1.27
MBD1-208ENST00000398493 COL5A3P25940 1745 aaPredicted RBP23.02■■□□□ 1.27
MBD1-208ENST00000398493 NUP188Q5SRE5 1749 aa23.02■■□□□ 1.27
MBD1-208ENST00000398493 CNTNAP4Q9C0A0 1308 aa23.01■■□□□ 1.27
MBD1-208ENST00000398493 ANXA1P04083 346 aa23.01■■□□□ 1.27
MBD1-208ENST00000398493 PDIA6Q15084 440 aa23.01■■□□□ 1.27
MBD1-208ENST00000398493 PROSER3Q2NL68 480 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms