RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 GNRH1P01148 92 aa6.35□□□□□ -1.39
CD47-203ENST00000398258 ATP4AP20648 1035 aa6.35□□□□□ -1.39
CD47-203ENST00000398258 EFHC2Q5JST6 749 aa6.35□□□□□ -1.39
CD47-203ENST00000398258 FAM229AH3BQW9 127 aa6.34□□□□□ -1.39
CD47-203ENST00000398258 SPATA31C1P0DKV0 1188 aa6.34□□□□□ -1.39
CD47-203ENST00000398258 CSB-PGBD3P0DP91 1061 aa6.34□□□□□ -1.39
CD47-203ENST00000398258 CD33P20138 364 aa6.34□□□□□ -1.39
CD47-203ENST00000398258 RFC5P40937 340 aa6.34□□□□□ -1.39
CD47-203ENST00000398258 COL9A3Q14050 684 aaPredicted RBP6.34□□□□□ -1.39
CD47-203ENST00000398258 PGBD3Q8N328 593 aa6.34□□□□□ -1.39
CD47-203ENST00000398258 PNMA1Q8ND90 353 aa6.34□□□□□ -1.39
CD47-203ENST00000398258 CCDC85AQ96PX6 553 aaPredicted RBP6.34□□□□□ -1.39
CD47-203ENST00000398258 FAM117AQ9C073 453 aa6.34□□□□□ -1.39
CD47-203ENST00000398258 DCDC2BA2VCK2 349 aa6.33□□□□□ -1.4
CD47-203ENST00000398258 PCBP4P57723 403 aaKnown RBP6.33□□□□□ -1.4
CD47-203ENST00000398258 TMEM214Q6NUQ4 689 aaKnown RBP6.33□□□□□ -1.4
CD47-203ENST00000398258 ADH6P28332 368 aa6.32□□□□□ -1.4
CD47-203ENST00000398258 TNP2Q05952 138 aa6.32□□□□□ -1.4
CD47-203ENST00000398258 TSGA10IPQ3SY00 556 aa6.32□□□□□ -1.4
CD47-203ENST00000398258 GNASQ5JWF2 1037 aa6.32□□□□□ -1.4
CD47-203ENST00000398258 RNF20Q5VTR2 975 aa6.32□□□□□ -1.4
CD47-203ENST00000398258 MDFIQ99750 246 aa6.32□□□□□ -1.4
CD47-203ENST00000398258 GPBP1L1Q9HC44 474 aaPredicted RBP6.32□□□□□ -1.4
CD47-203ENST00000398258 STRN4Q9NRL3 753 aa6.32□□□□□ -1.4
CD47-203ENST00000398258 PCDHGC4Q9Y5F7 938 aa6.32□□□□□ -1.4
CD47-203ENST00000398258 MAPTP10636 758 aaKnown RBP6.31□□□□□ -1.4
CD47-203ENST00000398258 PPARGC1BQ86YN6 1023 aaKnown RBP6.31□□□□□ -1.4
CD47-203ENST00000398258 CCDC125Q86Z20 511 aa6.31□□□□□ -1.4
CD47-203ENST00000398258 ETNK1Q9HBU6 452 aa6.31□□□□□ -1.4
CD47-203ENST00000398258 PLA2G4AP47712 749 aa6.3□□□□□ -1.4
CD47-203ENST00000398258 RHBDD1Q8TEB9 315 aa6.3□□□□□ -1.4
CD47-203ENST00000398258 TRIM52Q96A61 297 aa6.3□□□□□ -1.4
CD47-203ENST00000398258 ATXN7O15265 892 aaPredicted RBP6.29□□□□□ -1.4
CD47-203ENST00000398258 FAM182BQ5T319 152 aa6.29□□□□□ -1.4
CD47-203ENST00000398258 C8orf86Q6ZUL3 223 aa6.29□□□□□ -1.4
CD47-203ENST00000398258 ZNF295-AS1Q8N0V1 137 aa6.29□□□□□ -1.4
CD47-203ENST00000398258 ATP1B4Q9UN42 357 aaPredicted RBP6.28□□□□□ -1.4
CD47-203ENST00000398258 PRKCSHP14314 528 aaPredicted RBP6.27□□□□□ -1.41
CD47-203ENST00000398258 NR1H3Q13133 447 aa6.27□□□□□ -1.41
CD47-203ENST00000398258 GRIK4Q16099 956 aa6.27□□□□□ -1.41
CD47-203ENST00000398258 ZNF468Q5VIY5 522 aaPredicted RBP6.27□□□□□ -1.41
CD47-203ENST00000398258 AVENQ9NQS1 362 aaPredicted RBP6.27□□□□□ -1.41
CD47-203ENST00000398258 STARD13Q9Y3M8 1113 aa6.27□□□□□ -1.41
CD47-203ENST00000398258 A0A1W2PNR3 127 aa6.26□□□□□ -1.41
CD47-203ENST00000398258 KHNYNO15037 678 aaKnown RBP6.26□□□□□ -1.41
CD47-203ENST00000398258 TLR1Q15399 786 aa6.26□□□□□ -1.41
CD47-203ENST00000398258 FIGNL1Q6PIW4 674 aa6.26□□□□□ -1.41
CD47-203ENST00000398258 NLRP8Q86W28 1048 aa6.26□□□□□ -1.41
CD47-203ENST00000398258 CCER1Q8TC90 406 aaPredicted RBP6.26□□□□□ -1.41
CD47-203ENST00000398258 KDM4CQ9H3R0 1056 aa6.26□□□□□ -1.41
CD47-203ENST00000398258 USP3Q9Y6I4 520 aa6.26□□□□□ -1.41
CD47-203ENST00000398258 SCNN1DP51172 638 aa6.25□□□□□ -1.41
CD47-203ENST00000398258 TBC1D9Q6ZT07 1266 aa6.25□□□□□ -1.41
CD47-203ENST00000398258 ELOA3CA0A087WX78 387 aaPredicted RBP6.24□□□□□ -1.41
CD47-203ENST00000398258 ELOA3DA6NLF2 546 aaPredicted RBP6.24□□□□□ -1.41
CD47-203ENST00000398258 JAG1P78504 1218 aa6.24□□□□□ -1.41
CD47-203ENST00000398258 ELOA3BQ3SY89 546 aa6.24□□□□□ -1.41
CD47-203ENST00000398258 TPRNQ4KMQ1 711 aa6.24□□□□□ -1.41
CD47-203ENST00000398258 ELOA3Q8NG57 546 aa6.24□□□□□ -1.41
CD47-203ENST00000398258 CEP126Q9P2H0 1117 aa6.24□□□□□ -1.41
CD47-203ENST00000398258 EFSO43281 561 aa6.23□□□□□ -1.41
CD47-203ENST00000398258 ALBP02768 609 aa6.23□□□□□ -1.41
CD47-203ENST00000398258 NID1P14543 1247 aa6.23□□□□□ -1.41
CD47-203ENST00000398258 LCE5AQ5TCM9 118 aa6.23□□□□□ -1.41
CD47-203ENST00000398258 ESF1Q9H501 851 aaKnown RBP6.23□□□□□ -1.41
CD47-203ENST00000398258 M0R082 166 aa6.22□□□□□ -1.41
CD47-203ENST00000398258 APBA3O96018 575 aa6.22□□□□□ -1.41
CD47-203ENST00000398258 MYCP01106 439 aaPredicted RBP6.22□□□□□ -1.41
CD47-203ENST00000398258 FAM157BP0CG42 384 aa6.22□□□□□ -1.41
CD47-203ENST00000398258 GTF2E1P29083 439 aaPredicted RBP6.22□□□□□ -1.41
CD47-203ENST00000398258 PRRT3Q5FWE3 981 aa6.22□□□□□ -1.41
CD47-203ENST00000398258 SYT9Q86SS6 491 aa6.22□□□□□ -1.41
CD47-203ENST00000398258 ZNF417Q8TAU3 575 aa6.22□□□□□ -1.41
CD47-203ENST00000398258 AIDAQ96BJ3 306 aa6.22□□□□□ -1.41
CD47-203ENST00000398258 ZNF587Q96SQ5 575 aaPredicted RBP6.22□□□□□ -1.41
CD47-203ENST00000398258 ZIC5Q96T25 663 aa6.22□□□□□ -1.41
CD47-203ENST00000398258 H2AFB1P0C5Y9 115 aa6.21□□□□□ -1.42
CD47-203ENST00000398258 H2AFB2P0C5Z0 115 aa6.21□□□□□ -1.42
CD47-203ENST00000398258 SELPP16109 830 aa6.21□□□□□ -1.42
CD47-203ENST00000398258 MCCD1P59942 119 aaPredicted RBP6.21□□□□□ -1.42
CD47-203ENST00000398258 ADGRE1Q14246 886 aa6.21□□□□□ -1.42
CD47-203ENST00000398258 MBTPS1Q14703 1052 aa6.21□□□□□ -1.42
CD47-203ENST00000398258 ESCO1Q5FWF5 840 aa6.21□□□□□ -1.42
CD47-203ENST00000398258 PHTF2Q8N3S3 785 aa6.21□□□□□ -1.42
CD47-203ENST00000398258 C1orf216Q8TAB5 229 aa6.21□□□□□ -1.42
CD47-203ENST00000398258 MICALL1Q8N3F8 863 aa6.2□□□□□ -1.42
CD47-203ENST00000398258 DDRGK1Q96HY6 314 aa6.2□□□□□ -1.42
CD47-203ENST00000398258 PRR12Q9ULL5 1215 aa6.2□□□□□ -1.42
CD47-203ENST00000398258 IQSEC3Q9UPP2 1182 aaPredicted RBP6.2□□□□□ -1.42
CD47-203ENST00000398258 ARSJQ5FYB0 599 aaPredicted RBP6.19□□□□□ -1.42
CD47-203ENST00000398258 SHISA2Q6UWI4 295 aa6.19□□□□□ -1.42
CD47-203ENST00000398258 SLC30A3Q99726 388 aa6.19□□□□□ -1.42
CD47-203ENST00000398258 MARK1Q9P0L2 795 aa6.19□□□□□ -1.42
CD47-203ENST00000398258 ADARB2-AS1A8MUL3 147 aa6.18□□□□□ -1.42
CD47-203ENST00000398258 INHAP05111 366 aa6.18□□□□□ -1.42
CD47-203ENST00000398258 TMEM259Q4ZIN3 620 aa6.18□□□□□ -1.42
CD47-203ENST00000398258 C20orf204Q6ZNR8 217 aa6.18□□□□□ -1.42
CD47-203ENST00000398258 SSBP4Q9BWG4 385 aaPredicted RBP6.18□□□□□ -1.42
CD47-203ENST00000398258 NIFKQ9BYG3 293 aaKnown RBP6.18□□□□□ -1.42
CD47-203ENST00000398258 PRDM6Q9NQX0 595 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms