RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 TCHHQ07283 1943 aa23.81■■□□□ 1.4
AGAP3-202ENST00000397238 ATP2B3Q16720 1220 aa23.81■■□□□ 1.4
AGAP3-202ENST00000397238 UVSSAQ2YD98 709 aa23.81■■□□□ 1.4
AGAP3-202ENST00000397238 BCL2L12Q9HB09 334 aa23.81■■□□□ 1.4
AGAP3-202ENST00000397238 CAMK4Q16566 473 aa23.8■■□□□ 1.4
AGAP3-202ENST00000397238 AP5Z1O43299 807 aa23.8■■□□□ 1.4
AGAP3-202ENST00000397238 HDGFP51858 240 aaKnown RBP23.8■■□□□ 1.4
AGAP3-202ENST00000397238 ATP8B2P98198 1209 aa23.8■■□□□ 1.4
AGAP3-202ENST00000397238 EDC4Q6P2E9 1401 aaKnown RBP23.8■■□□□ 1.4
AGAP3-202ENST00000397238 CDK12Q9NYV4 1490 aaPredicted RBP23.8■■□□□ 1.4
AGAP3-202ENST00000397238 GNAI3P08754 354 aa23.79■■□□□ 1.4
AGAP3-202ENST00000397238 UBE2HP62256 183 aa23.79■■□□□ 1.4
AGAP3-202ENST00000397238 CPSF1Q10570 1443 aaKnown RBP23.79■■□□□ 1.4
AGAP3-202ENST00000397238 RPAP1Q9BWH6 1393 aaPredicted RBP23.78■■□□□ 1.4
AGAP3-202ENST00000397238 LARGE1O95461 756 aa23.78■■□□□ 1.4
AGAP3-202ENST00000397238 CASTP20810 708 aaKnown RBP23.78■■□□□ 1.4
AGAP3-202ENST00000397238 FERMT3Q86UX7 667 aa23.78■■□□□ 1.4
AGAP3-202ENST00000397238 SNX14Q9Y5W7 946 aa23.78■■□□□ 1.4
AGAP3-202ENST00000397238 SALL3Q9BXA9 1300 aa23.78■■□□□ 1.4
AGAP3-202ENST00000397238 HSPA4P34932 840 aa23.78■■□□□ 1.4
AGAP3-202ENST00000397238 LTKP29376 864 aa23.77■■□□□ 1.4
AGAP3-202ENST00000397238 CHAF1AQ13111 956 aaPredicted RBP23.77■■□□□ 1.4
AGAP3-202ENST00000397238 RUFY3Q7L099 469 aa23.77■■□□□ 1.4
AGAP3-202ENST00000397238 A0A0U1RQG5 324 aaPredicted RBP23.77■■□□□ 1.4
AGAP3-202ENST00000397238 F13A1P00488 732 aa23.77■■□□□ 1.4
AGAP3-202ENST00000397238 UBTFL1P0CB47 393 aaPredicted RBP23.77■■□□□ 1.4
AGAP3-202ENST00000397238 FAM173BQ6P4H8 233 aa23.77■■□□□ 1.4
AGAP3-202ENST00000397238 CPS1P31327 1500 aa23.77■■□□□ 1.4
AGAP3-202ENST00000397238 RIOK3O14730 519 aaKnown RBP23.76■■□□□ 1.39
AGAP3-202ENST00000397238 DRC7Q8IY82 874 aa23.76■■□□□ 1.39
AGAP3-202ENST00000397238 KIAA0232Q92628 1395 aa23.76■■□□□ 1.39
AGAP3-202ENST00000397238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.76■■□□□ 1.39
AGAP3-202ENST00000397238 ZSCAN20P17040 1043 aaPredicted RBP23.76■■□□□ 1.39
AGAP3-202ENST00000397238 GJB2P29033 226 aa23.76■■□□□ 1.39
AGAP3-202ENST00000397238 PDCL2Q8N4E4 241 aa23.76■■□□□ 1.39
AGAP3-202ENST00000397238 TNRQ92752 1358 aa23.76■■□□□ 1.39
AGAP3-202ENST00000397238 NECAB1Q8N987 351 aa23.75■■□□□ 1.39
AGAP3-202ENST00000397238 LIMCH1Q9UPQ0 1083 aa23.75■■□□□ 1.39
AGAP3-202ENST00000397238 ATP7BP35670 1465 aa23.75■■□□□ 1.39
AGAP3-202ENST00000397238 U2AF2P26368 475 aaKnown RBP eCLIP23.75■■□□□ 1.391e-5■□□□□ 9.3
AGAP3-202ENST00000397238 KCNF1Q9H3M0 494 aa23.75■■□□□ 1.39
AGAP3-202ENST00000397238 AATKQ6ZMQ8 1374 aa23.75■■□□□ 1.39
AGAP3-202ENST00000397238 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.74■■□□□ 1.39
AGAP3-202ENST00000397238 OS9Q13438 667 aaPredicted RBP23.74■■□□□ 1.39
AGAP3-202ENST00000397238 PLEKHG5O94827 1062 aa23.73■■□□□ 1.39
AGAP3-202ENST00000397238 LETM1O95202 739 aaPredicted RBP23.73■■□□□ 1.39
AGAP3-202ENST00000397238 PPP1R42Q7Z4L9 355 aa23.73■■□□□ 1.39
AGAP3-202ENST00000397238 CKAP2LQ8IYA6 745 aa23.73■■□□□ 1.39
AGAP3-202ENST00000397238 MAP3K19Q56UN5 1328 aa23.73■■□□□ 1.39
AGAP3-202ENST00000397238 EIF2S2P20042 333 aaKnown RBP23.73■■□□□ 1.39
AGAP3-202ENST00000397238 PTGS1P23219 599 aa23.72■■□□□ 1.39
AGAP3-202ENST00000397238 PRR36Q9H6K5 1346 aa23.72■■□□□ 1.39
AGAP3-202ENST00000397238 TRHP20396 242 aaPredicted RBP23.72■■□□□ 1.39
AGAP3-202ENST00000397238 DMTNQ08495 405 aa23.72■■□□□ 1.39
AGAP3-202ENST00000397238 JAKMIP1Q96N16 626 aaKnown RBP23.72■■□□□ 1.39
AGAP3-202ENST00000397238 SRGAP3O43295 1099 aa23.72■■□□□ 1.39
AGAP3-202ENST00000397238 USP44Q9H0E7 712 aa23.72■■□□□ 1.39
AGAP3-202ENST00000397238 PHAXQ9H814 394 aaKnown RBP23.71■■□□□ 1.39
AGAP3-202ENST00000397238 CCDC30Q5VVM6 783 aa23.71■■□□□ 1.39
AGAP3-202ENST00000397238 PRPF40BQ6NWY9 871 aaKnown RBP23.71■■□□□ 1.39
AGAP3-202ENST00000397238 KIAA1524Q8TCG1 905 aa23.71■■□□□ 1.39
AGAP3-202ENST00000397238 LTV1Q96GA3 475 aaPredicted RBP23.71■■□□□ 1.39
AGAP3-202ENST00000397238 ATP6V1DQ9Y5K8 247 aa23.71■■□□□ 1.39
AGAP3-202ENST00000397238 SGSM2O43147 1006 aa23.71■■□□□ 1.39
AGAP3-202ENST00000397238 LUZP1Q86V48 1076 aa23.71■■□□□ 1.39
AGAP3-202ENST00000397238 STAP2Q9UGK3 403 aa23.71■■□□□ 1.39
AGAP3-202ENST00000397238 ADCK5Q3MIX3 580 aa23.7■■□□□ 1.38
AGAP3-202ENST00000397238 TCEANC2Q96MN5 208 aa23.7■■□□□ 1.38
AGAP3-202ENST00000397238 KCNJ4P48050 445 aa23.69■■□□□ 1.38
AGAP3-202ENST00000397238 RHPN1Q8TCX5 695 aa23.69■■□□□ 1.38
AGAP3-202ENST00000397238 C16orf45Q96MC5 204 aaPredicted RBP23.69■■□□□ 1.38
AGAP3-202ENST00000397238 SPTLC3Q9NUV7 552 aa23.69■■□□□ 1.38
AGAP3-202ENST00000397238 TTC21BQ7Z4L5 1316 aa23.69■■□□□ 1.38
AGAP3-202ENST00000397238 RAD50Q92878 1312 aa23.69■■□□□ 1.38
AGAP3-202ENST00000397238 LRMPQ12912 555 aa23.69■■□□□ 1.38
AGAP3-202ENST00000397238 DIAPH3Q9NSV4 1193 aa23.69■■□□□ 1.38
AGAP3-202ENST00000397238 CRB1P82279 1406 aa23.68■■□□□ 1.38
AGAP3-202ENST00000397238 ROBO2Q9HCK4 1378 aa23.68■■□□□ 1.38
AGAP3-202ENST00000397238 TMEM87AQ8NBN3 555 aa23.68■■□□□ 1.38
AGAP3-202ENST00000397238 PDRG1Q9NUG6 133 aa23.68■■□□□ 1.38
AGAP3-202ENST00000397238 CCDC192P0DO97 292 aa23.68■■□□□ 1.38
AGAP3-202ENST00000397238 CNTROBQ8N137 903 aa23.68■■□□□ 1.38
AGAP3-202ENST00000397238 TTC14Q96N46 770 aa23.68■■□□□ 1.38
AGAP3-202ENST00000397238 TFIP11Q9UBB9 837 aaKnown RBP23.68■■□□□ 1.38
AGAP3-202ENST00000397238 ACEP12821 1306 aa23.67■■□□□ 1.38
AGAP3-202ENST00000397238 AMPHP49418 695 aa23.67■■□□□ 1.38
AGAP3-202ENST00000397238 NUTM2GQ5VZR2 741 aa23.67■■□□□ 1.38
AGAP3-202ENST00000397238 LSG1Q9H089 658 aaKnown RBP23.67■■□□□ 1.38
AGAP3-202ENST00000397238 AGLP35573 1532 aa23.67■■□□□ 1.38
AGAP3-202ENST00000397238 MTMR6Q9Y217 621 aa23.67■■□□□ 1.38
AGAP3-202ENST00000397238 PTH1RQ03431 593 aa23.67■■□□□ 1.38
AGAP3-202ENST00000397238 CCDC186Q7Z3E2 898 aa23.67■■□□□ 1.38
AGAP3-202ENST00000397238 RBM33Q96EV2 1170 aaKnown RBP23.67■■□□□ 1.38
AGAP3-202ENST00000397238 PODXL2Q9NZ53 605 aa23.67■■□□□ 1.38
AGAP3-202ENST00000397238 NRBP1Q9UHY1 535 aa23.67■■□□□ 1.38
AGAP3-202ENST00000397238 EID1Q9Y6B2 187 aa23.67■■□□□ 1.38
AGAP3-202ENST00000397238 GOLGA6L6A8MZA4 724 aa23.66■■□□□ 1.38
AGAP3-202ENST00000397238 GTF2F1P35269 517 aaKnown RBP eCLIP23.66■■□□□ 1.382e-6■■■■□ 21.5
AGAP3-202ENST00000397238 ZNF592Q92610 1267 aa23.66■■□□□ 1.38
AGAP3-202ENST00000397238 GOLGA6L4A6NEF3 574 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms