RNA–Protein interactions for RNA: ENST00000396856.5

GAPDH-202, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-202ENST00000396856 C4AP0C0L4 1744 aa16.22■□□□□ 0.19
GAPDH-202ENST00000396856 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
GAPDH-202ENST00000396856 SBF1O95248 1867 aa16.21■□□□□ 0.19
GAPDH-202ENST00000396856 LGR6Q9HBX8 967 aa16.21■□□□□ 0.19
GAPDH-202ENST00000396856 CCDC87Q9NVE4 849 aa16.21■□□□□ 0.19
GAPDH-202ENST00000396856 RNF181Q9P0P0 153 aa16.21■□□□□ 0.19
GAPDH-202ENST00000396856 PIM2Q9P1W9 311 aa16.21■□□□□ 0.19
GAPDH-202ENST00000396856 RFC4P35249 363 aa16.2■□□□□ 0.18
GAPDH-202ENST00000396856 GAS2L2Q8NHY3 880 aa16.2■□□□□ 0.18
GAPDH-202ENST00000396856 NUDCQ9Y266 331 aa16.2■□□□□ 0.18
GAPDH-202ENST00000396856 TNRC6CQ9HCJ0 1690 aaKnown RBP16.2■□□□□ 0.18
GAPDH-202ENST00000396856 CRKLP46109 303 aaKnown RBP16.19■□□□□ 0.18
GAPDH-202ENST00000396856 ADAMTS7Q9UKP4 1686 aa16.18■□□□□ 0.18
GAPDH-202ENST00000396856 DALRD3Q5D0E6 543 aaKnown RBP16.18■□□□□ 0.18
GAPDH-202ENST00000396856 GNAT3A8MTJ3 354 aa16.17■□□□□ 0.18
GAPDH-202ENST00000396856 PPP2R1AP30153 589 aa16.17■□□□□ 0.18
GAPDH-202ENST00000396856 PARP3Q9Y6F1 533 aa16.17■□□□□ 0.18
GAPDH-202ENST00000396856 POTECB2RU33 542 aa16.16■□□□□ 0.18
GAPDH-202ENST00000396856 VSIG10Q8N0Z9 540 aa16.16■□□□□ 0.18
GAPDH-202ENST00000396856 TJP1Q07157 1748 aa16.16■□□□□ 0.18
GAPDH-202ENST00000396856 VEGFAP15692 232 aaPredicted RBP16.15■□□□□ 0.18
GAPDH-202ENST00000396856 CHRNA5P30532 468 aa16.15■□□□□ 0.18
GAPDH-202ENST00000396856 TEFQ10587 303 aa16.15■□□□□ 0.18
GAPDH-202ENST00000396856 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
GAPDH-202ENST00000396856 TTC5Q8N0Z6 440 aa16.15■□□□□ 0.18
GAPDH-202ENST00000396856 ZC3H4Q9UPT8 1303 aaKnown RBP16.15■□□□□ 0.18
GAPDH-202ENST00000396856 GLTPD2A6NH11 291 aa16.14■□□□□ 0.17
GAPDH-202ENST00000396856 PRKAR2BP31323 418 aa16.14■□□□□ 0.17
GAPDH-202ENST00000396856 DDR1Q08345 913 aa16.14■□□□□ 0.17
GAPDH-202ENST00000396856 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
GAPDH-202ENST00000396856 DNAJC10Q8IXB1 793 aa16.14■□□□□ 0.17
GAPDH-202ENST00000396856 RSPH6AQ9H0K4 717 aa16.14■□□□□ 0.17
GAPDH-202ENST00000396856 USP42Q9H9J4 1324 aaKnown RBP16.14■□□□□ 0.17
GAPDH-202ENST00000396856 MYH14Q7Z406 1995 aaKnown RBP16.13■□□□□ 0.17
GAPDH-202ENST00000396856 U2AF1L5P0DN76 240 aaPredicted RBP16.13■□□□□ 0.17
GAPDH-202ENST00000396856 CYP19A1P11511 503 aaPredicted RBP16.13■□□□□ 0.17
GAPDH-202ENST00000396856 U2AF1Q01081 240 aaKnown RBP eCLIP16.13■□□□□ 0.17
GAPDH-202ENST00000396856 TM4SF1P30408 202 aa16.12■□□□□ 0.17
GAPDH-202ENST00000396856 FKBP8Q14318 412 aa16.12■□□□□ 0.17
GAPDH-202ENST00000396856 IL17REQ8NFR9 667 aa16.12■□□□□ 0.17
GAPDH-202ENST00000396856 VIRMAQ69YN4 1812 aaKnown RBP16.12■□□□□ 0.17
GAPDH-202ENST00000396856 RASSF7Q02833 373 aa16.11■□□□□ 0.17
GAPDH-202ENST00000396856 SRP68Q9UHB9 627 aaKnown RBP16.11■□□□□ 0.17
GAPDH-202ENST00000396856 SOS1Q07889 1333 aaPredicted RBP16.11■□□□□ 0.17
GAPDH-202ENST00000396856 CEMIPQ8WUJ3 1361 aa16.11■□□□□ 0.17
GAPDH-202ENST00000396856 ZPR1O75312 459 aa16.1■□□□□ 0.17
GAPDH-202ENST00000396856 STARD3NLO95772 234 aa16.1■□□□□ 0.17
GAPDH-202ENST00000396856 ZNF790Q6PG37 636 aa16.1■□□□□ 0.17
GAPDH-202ENST00000396856 PHACTR3Q96KR7 559 aa16.1■□□□□ 0.17
GAPDH-202ENST00000396856 TEX13AQ9BXU3 409 aaPredicted RBP16.1■□□□□ 0.17
GAPDH-202ENST00000396856 UBR2Q8IWV8 1755 aa16.09■□□□□ 0.17
GAPDH-202ENST00000396856 POLRMTO00411 1230 aaKnown RBP16.09■□□□□ 0.17
GAPDH-202ENST00000396856 FOXN1O15353 648 aa16.09■□□□□ 0.17
GAPDH-202ENST00000396856 LMNB1P20700 586 aa16.09■□□□□ 0.17
GAPDH-202ENST00000396856 ZEB1P37275 1124 aaPredicted RBP16.09■□□□□ 0.17
GAPDH-202ENST00000396856 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
GAPDH-202ENST00000396856 RTF1Q92541 710 aaKnown RBP16.08■□□□□ 0.16
GAPDH-202ENST00000396856 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.16
GAPDH-202ENST00000396856 COL15A1P39059 1388 aa16.08■□□□□ 0.16
GAPDH-202ENST00000396856 HEG1Q9ULI3 1381 aa16.08■□□□□ 0.16
GAPDH-202ENST00000396856 NEFMP07197 916 aa16.07■□□□□ 0.16
GAPDH-202ENST00000396856 USPL1Q5W0Q7 1092 aa16.07■□□□□ 0.16
GAPDH-202ENST00000396856 ZNF496Q96IT1 587 aaPredicted RBP16.07■□□□□ 0.16
GAPDH-202ENST00000396856 FMNL2Q96PY5 1086 aa16.07■□□□□ 0.16
GAPDH-202ENST00000396856 CREBZFQ9NS37 354 aa16.07■□□□□ 0.16
GAPDH-202ENST00000396856 NARFQ9UHQ1 456 aa16.07■□□□□ 0.16
GAPDH-202ENST00000396856 BTBD11A6QL63 1104 aa16.06■□□□□ 0.16
GAPDH-202ENST00000396856 HTATSF1O43719 755 aaKnown RBP16.06■□□□□ 0.16
GAPDH-202ENST00000396856 SIPA1L3O60292 1781 aaPredicted RBP16.05■□□□□ 0.16
GAPDH-202ENST00000396856 A0A087WZG4 1122 aa16.05■□□□□ 0.16
GAPDH-202ENST00000396856 NFKBIEO00221 500 aa16.05■□□□□ 0.16
GAPDH-202ENST00000396856 MKRN1Q9UHC7 482 aaKnown RBP16.05■□□□□ 0.16
GAPDH-202ENST00000396856 CANXP27824 592 aaKnown RBP16.04■□□□□ 0.16
GAPDH-202ENST00000396856 EIF5P55010 431 aaKnown RBP16.03■□□□□ 0.16
GAPDH-202ENST00000396856 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
GAPDH-202ENST00000396856 PNNQ9H307 717 aaKnown RBP16.03■□□□□ 0.16
GAPDH-202ENST00000396856 PCDH10Q9P2E7 1040 aa16.03■□□□□ 0.16
GAPDH-202ENST00000396856 POTEIP0CG38 1075 aa16.02■□□□□ 0.16
GAPDH-202ENST00000396856 POTEJP0CG39 1038 aa16.02■□□□□ 0.16
GAPDH-202ENST00000396856 RALBP1Q15311 655 aa16.02■□□□□ 0.16
GAPDH-202ENST00000396856 MCM10Q7L590 875 aa16.02■□□□□ 0.16
GAPDH-202ENST00000396856 CNTNAP1P78357 1384 aa16.01■□□□□ 0.15
GAPDH-202ENST00000396856 IL6STP40189 918 aaPredicted RBP16.01■□□□□ 0.15
GAPDH-202ENST00000396856 NFIXQ14938 502 aa16.01■□□□□ 0.15
GAPDH-202ENST00000396856 NRXN2Q9P2S2 1712 aa16.01■□□□□ 0.15
GAPDH-202ENST00000396856 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
GAPDH-202ENST00000396856 PASKQ96RG2 1323 aa16■□□□□ 0.15
GAPDH-202ENST00000396856 CHADLQ6NUI6 762 aa16■□□□□ 0.15
GAPDH-202ENST00000396856 TTLL6Q8N841 843 aa16■□□□□ 0.15
GAPDH-202ENST00000396856 BCL2L12Q9HB09 334 aa16■□□□□ 0.15
GAPDH-202ENST00000396856 WBP1LQ9NX94 342 aa16■□□□□ 0.15
GAPDH-202ENST00000396856 TIAM2Q8IVF5 1701 aa15.99■□□□□ 0.15
GAPDH-202ENST00000396856 KCNQ3O43525 872 aa15.99■□□□□ 0.15
GAPDH-202ENST00000396856 SNRPA1P09661 255 aaKnown RBP15.99■□□□□ 0.15
GAPDH-202ENST00000396856 CTCFP49711 727 aaPredicted RBP15.99■□□□□ 0.15
GAPDH-202ENST00000396856 TAF7Q15545 349 aaPredicted RBP15.99■□□□□ 0.15
GAPDH-202ENST00000396856 FAM161AQ3B820 660 aa15.99■□□□□ 0.15
GAPDH-202ENST00000396856 DPY19L2Q6NUT2 758 aa15.99■□□□□ 0.15
GAPDH-202ENST00000396856 DLEC1Q9Y238 1755 aa15.99■□□□□ 0.15
GAPDH-202ENST00000396856 AFDNP55196 1824 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms