RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ARHGAP27Q6ZUM4 889 aa21.96■■□□□ 1.11
CLTA-203ENST00000396603 SLC39A6Q13433 755 aa21.95■■□□□ 1.1
CLTA-203ENST00000396603 USPL1Q5W0Q7 1092 aa21.95■■□□□ 1.1
CLTA-203ENST00000396603 TTC5Q8N0Z6 440 aa21.94■■□□□ 1.1
CLTA-203ENST00000396603 TEX13AQ9BXU3 409 aaPredicted RBP21.94■■□□□ 1.1
CLTA-203ENST00000396603 ZBTB1Q9Y2K1 713 aa21.94■■□□□ 1.1
CLTA-203ENST00000396603 VIRMAQ69YN4 1812 aaKnown RBP21.94■■□□□ 1.1
CLTA-203ENST00000396603 STARD3NLO95772 234 aa21.93■■□□□ 1.1
CLTA-203ENST00000396603 NRXN2Q9P2S2 1712 aa21.93■■□□□ 1.1
CLTA-203ENST00000396603 GNAT3A8MTJ3 354 aa21.92■■□□□ 1.1
CLTA-203ENST00000396603 TOMM70O94826 608 aa21.92■■□□□ 1.1
CLTA-203ENST00000396603 A0A087WZG4 1122 aa21.91■■□□□ 1.1
CLTA-203ENST00000396603 TEFQ10587 303 aa21.91■■□□□ 1.1
CLTA-203ENST00000396603 ZC3H4Q9UPT8 1303 aaKnown RBP21.9■■□□□ 1.1
CLTA-203ENST00000396603 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
CLTA-203ENST00000396603 NFIXQ14938 502 aa21.9■■□□□ 1.1
CLTA-203ENST00000396603 ZNF790Q6PG37 636 aa21.9■■□□□ 1.1
CLTA-203ENST00000396603 CEMIPQ8WUJ3 1361 aa21.89■■□□□ 1.1
CLTA-203ENST00000396603 HEG1Q9ULI3 1381 aa21.89■■□□□ 1.1
CLTA-203ENST00000396603 U2SURPO15042 1029 aaKnown RBP21.89■■□□□ 1.09
CLTA-203ENST00000396603 EIF5P55010 431 aaKnown RBP21.89■■□□□ 1.09
CLTA-203ENST00000396603 C9orf131Q5VYM1 1079 aa21.89■■□□□ 1.09
CLTA-203ENST00000396603 CFAP53Q96M91 514 aa21.89■■□□□ 1.09
CLTA-203ENST00000396603 IL17REQ8NFR9 667 aa21.88■■□□□ 1.09
CLTA-203ENST00000396603 BCL2L12Q9HB09 334 aa21.88■■□□□ 1.09
CLTA-203ENST00000396603 PDZRN3Q9UPQ7 1066 aa21.88■■□□□ 1.09
CLTA-203ENST00000396603 SIPA1L3O60292 1781 aaPredicted RBP21.87■■□□□ 1.09
CLTA-203ENST00000396603 KDM2BQ8NHM5 1336 aa21.86■■□□□ 1.09
CLTA-203ENST00000396603 SERPINB2P05120 415 aa21.86■■□□□ 1.09
CLTA-203ENST00000396603 CHRNA5P30532 468 aa21.86■■□□□ 1.09
CLTA-203ENST00000396603 APLP1P51693 650 aa21.86■■□□□ 1.09
CLTA-203ENST00000396603 ZNF496Q96IT1 587 aaPredicted RBP21.86■■□□□ 1.09
CLTA-203ENST00000396603 IL6STP40189 918 aaPredicted RBP21.85■■□□□ 1.09
CLTA-203ENST00000396603 FMNL2Q96PY5 1086 aa21.85■■□□□ 1.09
CLTA-203ENST00000396603 NUDCQ9Y266 331 aa21.85■■□□□ 1.09
CLTA-203ENST00000396603 DLEC1Q9Y238 1755 aa21.84■■□□□ 1.09
CLTA-203ENST00000396603 CANXP27824 592 aaKnown RBP21.84■■□□□ 1.09
CLTA-203ENST00000396603 RBM46Q8TBY0 533 aaKnown RBP21.84■■□□□ 1.09
CLTA-203ENST00000396603 AFDNP55196 1824 aaKnown RBP21.84■■□□□ 1.09
CLTA-203ENST00000396603 SCN7AQ01118 1682 aa21.83■■□□□ 1.09
CLTA-203ENST00000396603 RSPH6AQ9H0K4 717 aa21.83■■□□□ 1.09
CLTA-203ENST00000396603 RNF181Q9P0P0 153 aa21.83■■□□□ 1.09
CLTA-203ENST00000396603 NMRK2Q9NPI5 230 aa21.82■■□□□ 1.08
CLTA-203ENST00000396603 H0YIN7 160 aa21.81■■□□□ 1.08
CLTA-203ENST00000396603 TTLL6Q8N841 843 aa21.81■■□□□ 1.08
CLTA-203ENST00000396603 CARMIL3Q8ND23 1372 aa21.81■■□□□ 1.08
CLTA-203ENST00000396603 PRKAR2BP31323 418 aa21.8■■□□□ 1.08
CLTA-203ENST00000396603 FSTL1Q12841 308 aa21.8■■□□□ 1.08
CLTA-203ENST00000396603 NPM2Q86SE8 214 aaKnown RBP21.8■■□□□ 1.08
CLTA-203ENST00000396603 C16orf71Q8IYS4 520 aaPredicted RBP21.8■■□□□ 1.08
CLTA-203ENST00000396603 TNRC6CQ9HCJ0 1690 aaKnown RBP21.79■■□□□ 1.08
CLTA-203ENST00000396603 BTBD11A6QL63 1104 aa21.79■■□□□ 1.08
CLTA-203ENST00000396603 LMNB1P20700 586 aa21.79■■□□□ 1.08
CLTA-203ENST00000396603 BRIP1Q9BX63 1249 aa21.79■■□□□ 1.08
CLTA-203ENST00000396603 RGL2O15211 777 aa21.78■■□□□ 1.08
CLTA-203ENST00000396603 HTATSF1O43719 755 aaKnown RBP21.78■■□□□ 1.08
CLTA-203ENST00000396603 PDE6BP35913 854 aa21.78■■□□□ 1.08
CLTA-203ENST00000396603 C2CD5Q86YS7 1000 aa21.78■■□□□ 1.08
CLTA-203ENST00000396603 PHACTR3Q96KR7 559 aa21.78■■□□□ 1.08
CLTA-203ENST00000396603 SBF1O95248 1867 aa21.77■■□□□ 1.08
CLTA-203ENST00000396603 PPP2R1AP30153 589 aa21.76■■□□□ 1.07
CLTA-203ENST00000396603 TBC1D9BQ66K14 1250 aa21.76■■□□□ 1.07
CLTA-203ENST00000396603 RTF1Q92541 710 aaKnown RBP21.76■■□□□ 1.07
CLTA-203ENST00000396603 IFFO2Q5TF58 517 aa21.75■■□□□ 1.07
CLTA-203ENST00000396603 CAMTA2O94983 1202 aa21.74■■□□□ 1.07
CLTA-203ENST00000396603 U2AF1L5P0DN76 240 aaPredicted RBP21.74■■□□□ 1.07
CLTA-203ENST00000396603 U2AF1Q01081 240 aaKnown RBP eCLIP21.74■■□□□ 1.07
CLTA-203ENST00000396603 PRR5LQ6MZQ0 368 aa21.74■■□□□ 1.07
CLTA-203ENST00000396603 CLEC4GQ6UXB4 293 aa21.74■■□□□ 1.07
CLTA-203ENST00000396603 SETDB2Q96T68 719 aa21.74■■□□□ 1.07
CLTA-203ENST00000396603 BICDL1Q6ZP65 573 aa21.73■■□□□ 1.07
CLTA-203ENST00000396603 TBC1D2BQ9UPU7 963 aa21.73■■□□□ 1.07
CLTA-203ENST00000396603 BCORQ6W2J9 1755 aa21.72■■□□□ 1.07
CLTA-203ENST00000396603 GLTPD2A6NH11 291 aa21.72■■□□□ 1.07
CLTA-203ENST00000396603 A1BGP04217 495 aa21.72■■□□□ 1.07
CLTA-203ENST00000396603 SNRPA1P09661 255 aaKnown RBP21.72■■□□□ 1.07
CLTA-203ENST00000396603 RASSF7Q02833 373 aa21.72■■□□□ 1.07
CLTA-203ENST00000396603 CNGB1Q14028 1251 aaPredicted RBP21.72■■□□□ 1.07
CLTA-203ENST00000396603 DNAJC5GQ8N7S2 189 aa21.72■■□□□ 1.07
CLTA-203ENST00000396603 CNBD1Q8NA66 436 aa21.72■■□□□ 1.07
CLTA-203ENST00000396603 DZIP3Q86Y13 1208 aaKnown RBP21.71■■□□□ 1.07
CLTA-203ENST00000396603 RRAGCQ9HB90 399 aa21.71■■□□□ 1.07
CLTA-203ENST00000396603 ZNF652Q9Y2D9 606 aa21.71■■□□□ 1.07
CLTA-203ENST00000396603 ZNF330Q9Y3S2 320 aaPredicted RBP21.71■■□□□ 1.07
CLTA-203ENST00000396603 LTBP3Q9NS15 1303 aa21.71■■□□□ 1.07
CLTA-203ENST00000396603 ANKRD31Q8N7Z5 1873 aa21.71■■□□□ 1.07
CLTA-203ENST00000396603 WDR90Q96KV7 1748 aa21.7■■□□□ 1.06
CLTA-203ENST00000396603 NFKBIEO00221 500 aa21.7■■□□□ 1.06
CLTA-203ENST00000396603 ST5P78524 1137 aa21.7■■□□□ 1.06
CLTA-203ENST00000396603 SOGA3Q5TF21 947 aa21.7■■□□□ 1.06
CLTA-203ENST00000396603 SMC1BQ8NDV3 1235 aa21.7■■□□□ 1.06
CLTA-203ENST00000396603 KCNQ3O43525 872 aa21.69■■□□□ 1.06
CLTA-203ENST00000396603 VEGFAP15692 232 aaPredicted RBP21.69■■□□□ 1.06
CLTA-203ENST00000396603 STYK1Q6J9G0 422 aa21.69■■□□□ 1.06
CLTA-203ENST00000396603 CNKSR1Q969H4 720 aa21.69■■□□□ 1.06
CLTA-203ENST00000396603 USP16Q9Y5T5 823 aa21.69■■□□□ 1.06
CLTA-203ENST00000396603 ZNF622Q969S3 477 aaKnown RBP eCLIP21.68■■□□□ 1.063e-9■□□□□ 8.1
CLTA-203ENST00000396603 TIAM2Q8IVF5 1701 aa21.67■■□□□ 1.06
CLTA-203ENST00000396603 NEFMP07197 916 aa21.67■■□□□ 1.06
CLTA-203ENST00000396603 PRELPP51888 382 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms