RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 STARD3NLO95772 234 aa23.29■■□□□ 1.32
TNFSF13-204ENST00000396542 ADRA2BP18089 450 aa23.29■■□□□ 1.32
TNFSF13-204ENST00000396542 CCDC27Q2M243 656 aa23.29■■□□□ 1.32
TNFSF13-204ENST00000396542 CHL1O00533 1208 aa23.28■■□□□ 1.32
TNFSF13-204ENST00000396542 SNRPA1P09661 255 aaKnown RBP23.28■■□□□ 1.32
TNFSF13-204ENST00000396542 PTGER2P43116 358 aa23.28■■□□□ 1.32
TNFSF13-204ENST00000396542 EIF4A1P60842 406 aaKnown RBP23.28■■□□□ 1.32
TNFSF13-204ENST00000396542 SGIP1Q9BQI5 828 aa23.28■■□□□ 1.32
TNFSF13-204ENST00000396542 TSPYL4Q9UJ04 414 aa23.28■■□□□ 1.32
TNFSF13-204ENST00000396542 MSH5O43196 834 aa23.27■■□□□ 1.32
TNFSF13-204ENST00000396542 TRAPPC3LQ5T215 181 aa23.27■■□□□ 1.32
TNFSF13-204ENST00000396542 ATF5Q9Y2D1 282 aaPredicted RBP23.27■■□□□ 1.32
TNFSF13-204ENST00000396542 ZBTB1Q9Y2K1 713 aa23.27■■□□□ 1.32
TNFSF13-204ENST00000396542 PRAMEF22A3QJZ6 481 aa23.26■■□□□ 1.31
TNFSF13-204ENST00000396542 ARHGEF1Q92888 912 aaKnown RBP23.26■■□□□ 1.31
TNFSF13-204ENST00000396542 SOS1Q07889 1333 aaPredicted RBP23.26■■□□□ 1.31
TNFSF13-204ENST00000396542 ZNF853P0CG23 659 aa23.25■■□□□ 1.31
TNFSF13-204ENST00000396542 CFAP44Q96MT7 982 aa23.25■■□□□ 1.31
TNFSF13-204ENST00000396542 USP16Q9Y5T5 823 aa23.25■■□□□ 1.31
TNFSF13-204ENST00000396542 GIGYF1O75420 1035 aaPredicted RBP23.24■■□□□ 1.31
TNFSF13-204ENST00000396542 CALD1Q05682 793 aaKnown RBP23.24■■□□□ 1.31
TNFSF13-204ENST00000396542 MIER1Q8N108 512 aa23.24■■□□□ 1.31
TNFSF13-204ENST00000396542 WWC1Q8IX03 1113 aa23.23■■□□□ 1.31
TNFSF13-204ENST00000396542 IFT57Q9NWB7 429 aa23.22■■□□□ 1.31
TNFSF13-204ENST00000396542 COL15A1P39059 1388 aa23.22■■□□□ 1.31
TNFSF13-204ENST00000396542 SENP3-EIF4A1A0A087X0R7 540 aa23.21■■□□□ 1.31
TNFSF13-204ENST00000396542 A1BGP04217 495 aa23.21■■□□□ 1.31
TNFSF13-204ENST00000396542 CANXP27824 592 aaKnown RBP23.21■■□□□ 1.31
TNFSF13-204ENST00000396542 EIF5P55010 431 aaKnown RBP23.21■■□□□ 1.31
TNFSF13-204ENST00000396542 RFC4P35249 363 aa23.2■■□□□ 1.3
TNFSF13-204ENST00000396542 IL6STP40189 918 aaPredicted RBP23.2■■□□□ 1.3
TNFSF13-204ENST00000396542 NGEFQ8N5V2 710 aa23.2■■□□□ 1.3
TNFSF13-204ENST00000396542 LAS1LQ9Y4W2 734 aaKnown RBP23.2■■□□□ 1.3
TNFSF13-204ENST00000396542 USP42Q9H9J4 1324 aaKnown RBP23.19■■□□□ 1.3
TNFSF13-204ENST00000396542 GNAI1P63096 354 aa23.19■■□□□ 1.3
TNFSF13-204ENST00000396542 MSL1Q68DK7 614 aa23.19■■□□□ 1.3
TNFSF13-204ENST00000396542 MBIPQ9NS73 344 aa23.19■■□□□ 1.3
TNFSF13-204ENST00000396542 GYS1P13807 737 aa23.18■■□□□ 1.3
TNFSF13-204ENST00000396542 SCN7AQ01118 1682 aa23.18■■□□□ 1.3
TNFSF13-204ENST00000396542 IL16Q14005 1332 aa23.17■■□□□ 1.3
TNFSF13-204ENST00000396542 POLD1P28340 1107 aa23.17■■□□□ 1.3
TNFSF13-204ENST00000396542 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
TNFSF13-204ENST00000396542 NBPF10Q6P3W6 841 aaKnown RBP23.16■■□□□ 1.3
TNFSF13-204ENST00000396542 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
TNFSF13-204ENST00000396542 SRP68Q9UHB9 627 aaKnown RBP23.16■■□□□ 1.3
TNFSF13-204ENST00000396542 NARFQ9UHQ1 456 aa23.16■■□□□ 1.3
TNFSF13-204ENST00000396542 BCORQ6W2J9 1755 aa23.16■■□□□ 1.3
TNFSF13-204ENST00000396542 A0A087WZG4 1122 aa23.15■■□□□ 1.3
TNFSF13-204ENST00000396542 NLGN1Q8N2Q7 840 aa23.15■■□□□ 1.3
TNFSF13-204ENST00000396542 ARXQ96QS3 562 aa23.15■■□□□ 1.3
TNFSF13-204ENST00000396542 PPP1R1BQ9UD71 204 aaPredicted RBP23.15■■□□□ 1.3
TNFSF13-204ENST00000396542 KRT24Q2M2I5 525 aa23.14■■□□□ 1.29
TNFSF13-204ENST00000396542 WDR63Q8IWG1 891 aa23.14■■□□□ 1.29
TNFSF13-204ENST00000396542 ERBB4Q15303 1308 aa23.13■■□□□ 1.29
TNFSF13-204ENST00000396542 PIP4K2AP48426 406 aaPredicted RBP23.13■■□□□ 1.29
TNFSF13-204ENST00000396542 SALL2Q9Y467 1007 aaPredicted RBP23.13■■□□□ 1.29
TNFSF13-204ENST00000396542 ZPR1O75312 459 aa23.12■■□□□ 1.29
TNFSF13-204ENST00000396542 HOXB7P09629 217 aa23.12■■□□□ 1.29
TNFSF13-204ENST00000396542 USPL1Q5W0Q7 1092 aa23.12■■□□□ 1.29
TNFSF13-204ENST00000396542 ZNF521Q96K83 1311 aa23.11■■□□□ 1.29
TNFSF13-204ENST00000396542 BCL2L12Q9HB09 334 aa23.11■■□□□ 1.29
TNFSF13-204ENST00000396542 FKBP8Q14318 412 aa23.1■■□□□ 1.29
TNFSF13-204ENST00000396542 ZNF330Q9Y3S2 320 aaPredicted RBP23.1■■□□□ 1.29
TNFSF13-204ENST00000396542 MMP10P09238 476 aa23.09■■□□□ 1.29
TNFSF13-204ENST00000396542 PDIA6Q15084 440 aa23.09■■□□□ 1.29
TNFSF13-204ENST00000396542 TBC1D2BQ9UPU7 963 aa23.09■■□□□ 1.29
TNFSF13-204ENST00000396542 DUSP27Q5VZP5 1158 aa23.08■■□□□ 1.29
TNFSF13-204ENST00000396542 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.29
TNFSF13-204ENST00000396542 TSR2Q969E8 191 aaKnown RBP23.08■■□□□ 1.29
TNFSF13-204ENST00000396542 FHDC1Q9C0D6 1143 aaPredicted RBP23.08■■□□□ 1.29
TNFSF13-204ENST00000396542 KIF13BQ9NQT8 1826 aa23.08■■□□□ 1.28
TNFSF13-204ENST00000396542 CAMTA2O94983 1202 aa23.07■■□□□ 1.28
TNFSF13-204ENST00000396542 EIF2S2P20042 333 aaKnown RBP23.07■■□□□ 1.28
TNFSF13-204ENST00000396542 LRP10Q7Z4F1 713 aa23.07■■□□□ 1.28
TNFSF13-204ENST00000396542 DZIP3Q86Y13 1208 aaKnown RBP23.07■■□□□ 1.28
TNFSF13-204ENST00000396542 NRXN2Q9P2S2 1712 aa23.06■■□□□ 1.28
TNFSF13-204ENST00000396542 TM4SF1P30408 202 aa23.06■■□□□ 1.28
TNFSF13-204ENST00000396542 C8orf58Q8NAV2 365 aa23.06■■□□□ 1.28
TNFSF13-204ENST00000396542 FANCIQ9NVI1 1328 aa23.06■■□□□ 1.28
TNFSF13-204ENST00000396542 RGL2O15211 777 aa23.05■■□□□ 1.28
TNFSF13-204ENST00000396542 SYT17Q9BSW7 474 aa23.05■■□□□ 1.28
TNFSF13-204ENST00000396542 SPINK5Q9NQ38 1064 aaPredicted RBP23.05■■□□□ 1.28
TNFSF13-204ENST00000396542 AFDNP55196 1824 aaKnown RBP23.04■■□□□ 1.28
TNFSF13-204ENST00000396542 MYL6BP14649 208 aa23.04■■□□□ 1.28
TNFSF13-204ENST00000396542 DDR1Q08345 913 aa23.04■■□□□ 1.28
TNFSF13-204ENST00000396542 HDGFL1Q5TGJ6 251 aa23.04■■□□□ 1.28
TNFSF13-204ENST00000396542 NFIXQ14938 502 aa23.03■■□□□ 1.28
TNFSF13-204ENST00000396542 PROSER3Q2NL68 480 aa23.03■■□□□ 1.28
TNFSF13-204ENST00000396542 DDX21Q9NR30 783 aaKnown RBP eCLIP23.03■■□□□ 1.28
TNFSF13-204ENST00000396542 NUP98P52948 1817 aa23.03■■□□□ 1.28
TNFSF13-204ENST00000396542 POLRMTO00411 1230 aaKnown RBP23.02■■□□□ 1.28
TNFSF13-204ENST00000396542 NECTIN2Q92692 538 aa23.02■■□□□ 1.28
TNFSF13-204ENST00000396542 PARP3Q9Y6F1 533 aa23.02■■□□□ 1.28
TNFSF13-204ENST00000396542 C10orf71Q711Q0 1435 aa23.01■■□□□ 1.27
TNFSF13-204ENST00000396542 ELL2O00472 640 aaPredicted RBP23.01■■□□□ 1.27
TNFSF13-204ENST00000396542 CLEC4GQ6UXB4 293 aa23.01■■□□□ 1.27
TNFSF13-204ENST00000396542 TSPYL6Q8N831 410 aa23.01■■□□□ 1.27
TNFSF13-204ENST00000396542 CHPF2Q9P2E5 772 aa23.01■■□□□ 1.27
TNFSF13-204ENST00000396542 CD2APQ9Y5K6 639 aa23.01■■□□□ 1.27
TNFSF13-204ENST00000396542 KIAA1551Q9HCM1 1747 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms