RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 BCL11AQ9H165 835 aa20.65■□□□□ 0.9
NUP50-202ENST00000396096 PPP1R42Q7Z4L9 355 aa20.64■□□□□ 0.9
NUP50-202ENST00000396096 ALDH1L1O75891 902 aa20.64■□□□□ 0.89
NUP50-202ENST00000396096 RAPGEF4Q8WZA2 1011 aa20.64■□□□□ 0.89
NUP50-202ENST00000396096 PKD1L3Q7Z443 1732 aa20.64■□□□□ 0.89
NUP50-202ENST00000396096 XIRP1Q702N8 1843 aaKnown RBP20.64■□□□□ 0.89
NUP50-202ENST00000396096 KDM6AO15550 1401 aaPredicted RBP20.63■□□□□ 0.89
NUP50-202ENST00000396096 MRC1P22897 1456 aa20.63■□□□□ 0.89
NUP50-202ENST00000396096 NBPF7P0C2Y1 421 aaPredicted RBP20.62■□□□□ 0.89
NUP50-202ENST00000396096 HYPKQ9NX55 129 aa20.62■□□□□ 0.89
NUP50-202ENST00000396096 CPDO75976 1380 aa20.62■□□□□ 0.89
NUP50-202ENST00000396096 TATP17735 454 aaPredicted RBP20.62■□□□□ 0.89
NUP50-202ENST00000396096 MTX1Q13505 466 aa20.62■□□□□ 0.89
NUP50-202ENST00000396096 KSR2Q6VAB6 950 aa20.62■□□□□ 0.89
NUP50-202ENST00000396096 MEGF6O75095 1541 aa20.61■□□□□ 0.89
NUP50-202ENST00000396096 C5P01031 1676 aa20.61■□□□□ 0.89
NUP50-202ENST00000396096 ANXA1P04083 346 aa20.61■□□□□ 0.89
NUP50-202ENST00000396096 SPG7Q9UQ90 795 aa20.61■□□□□ 0.89
NUP50-202ENST00000396096 SPATA31A3Q5VYP0 1347 aa20.61■□□□□ 0.89
NUP50-202ENST00000396096 NLRP2Q9NX02 1062 aa20.6■□□□□ 0.89
NUP50-202ENST00000396096 PHKG2P15735 406 aa20.6■□□□□ 0.89
NUP50-202ENST00000396096 RAB3GAP1Q15042 981 aa20.6■□□□□ 0.89
NUP50-202ENST00000396096 DDX17Q92841 729 aaKnown RBP20.6■□□□□ 0.89
NUP50-202ENST00000396096 SLC52A2Q9HAB3 445 aa20.6■□□□□ 0.89
NUP50-202ENST00000396096 HDAC5Q9UQL6 1122 aa20.6■□□□□ 0.89
NUP50-202ENST00000396096 SRGAP3O43295 1099 aa20.59■□□□□ 0.89
NUP50-202ENST00000396096 SURF6O75683 361 aaKnown RBP20.59■□□□□ 0.89
NUP50-202ENST00000396096 PROSER3Q2NL68 480 aa20.59■□□□□ 0.89
NUP50-202ENST00000396096 HSP90AB4PQ58FF6 505 aa20.59■□□□□ 0.89
NUP50-202ENST00000396096 KIF1BPQ96EK5 621 aa20.59■□□□□ 0.89
NUP50-202ENST00000396096 DDX21Q9NR30 783 aaKnown RBP eCLIP20.59■□□□□ 0.89
NUP50-202ENST00000396096 MAP3K2Q9Y2U5 619 aa20.59■□□□□ 0.89
NUP50-202ENST00000396096 RHPN1Q8TCX5 695 aa20.58■□□□□ 0.89
NUP50-202ENST00000396096 ESYT1Q9BSJ8 1104 aa20.58■□□□□ 0.89
NUP50-202ENST00000396096 TSHZ3Q63HK5 1081 aa20.58■□□□□ 0.88
NUP50-202ENST00000396096 ZNF790Q6PG37 636 aa20.58■□□□□ 0.88
NUP50-202ENST00000396096 PARP4Q9UKK3 1724 aaKnown RBP20.58■□□□□ 0.88
NUP50-202ENST00000396096 AK9Q5TCS8 1911 aa20.57■□□□□ 0.88
NUP50-202ENST00000396096 DDX11L8A8MPP1 907 aa20.57■□□□□ 0.88
NUP50-202ENST00000396096 CHMLP26374 656 aa20.57■□□□□ 0.88
NUP50-202ENST00000396096 PDIA6Q15084 440 aa20.57■□□□□ 0.88
NUP50-202ENST00000396096 IFNL2Q8IZJ0 200 aa20.57■□□□□ 0.88
NUP50-202ENST00000396096 UTYO14607 1347 aa20.57■□□□□ 0.88
NUP50-202ENST00000396096 PRAMEF22A3QJZ6 481 aa20.56■□□□□ 0.88
NUP50-202ENST00000396096 EPB41L2O43491 1005 aaKnown RBP20.56■□□□□ 0.88
NUP50-202ENST00000396096 HSP90AA1P07900 732 aaKnown RBP20.56■□□□□ 0.88
NUP50-202ENST00000396096 USP42Q9H9J4 1324 aaKnown RBP20.56■□□□□ 0.88
NUP50-202ENST00000396096 DDX58O95786 925 aaKnown RBP20.56■□□□□ 0.88
NUP50-202ENST00000396096 LINS1Q8NG48 757 aa20.56■□□□□ 0.88
NUP50-202ENST00000396096 IL17RAQ96F46 866 aa20.56■□□□□ 0.88
NUP50-202ENST00000396096 TNPO1Q92973 898 aaKnown RBP20.55■□□□□ 0.88
NUP50-202ENST00000396096 IL1RAPL2Q9NP60 686 aa20.55■□□□□ 0.88
NUP50-202ENST00000396096 ST18O60284 1047 aa20.54■□□□□ 0.88
NUP50-202ENST00000396096 PI4K2BQ8TCG2 481 aa20.54■□□□□ 0.88
NUP50-202ENST00000396096 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
NUP50-202ENST00000396096 DCAF5Q96JK2 942 aa20.54■□□□□ 0.88
NUP50-202ENST00000396096 TRIM6-TRIM34B2RNG4 842 aa20.53■□□□□ 0.88
NUP50-202ENST00000396096 CSB-PGBD3P0DP91 1061 aa20.53■□□□□ 0.88
NUP50-202ENST00000396096 C9orf78Q9NZ63 289 aaPredicted RBP20.53■□□□□ 0.88
NUP50-202ENST00000396096 ANAPC15P60006 121 aa20.52■□□□□ 0.88
NUP50-202ENST00000396096 CLEC17AQ6ZS10 378 aa20.52■□□□□ 0.88
NUP50-202ENST00000396096 NUTM1Q86Y26 1132 aa20.52■□□□□ 0.88
NUP50-202ENST00000396096 RILPL2Q969X0 211 aa20.52■□□□□ 0.88
NUP50-202ENST00000396096 GBP4Q96PP9 640 aa20.52■□□□□ 0.88
NUP50-202ENST00000396096 UNC5CLQ8IV45 518 aa20.52■□□□□ 0.87
NUP50-202ENST00000396096 NFATC2IPQ8NCF5 419 aa20.52■□□□□ 0.87
NUP50-202ENST00000396096 PTMSP20962 102 aa20.51■□□□□ 0.87
NUP50-202ENST00000396096 SLC39A6Q13433 755 aa20.51■□□□□ 0.87
NUP50-202ENST00000396096 TTC41PQ6P2S7 1318 aa20.51■□□□□ 0.87
NUP50-202ENST00000396096 LAMB4A4D0S4 1761 aa20.51■□□□□ 0.87
NUP50-202ENST00000396096 GRM8O00222 908 aa20.5■□□□□ 0.87
NUP50-202ENST00000396096 CYP27B1O15528 508 aa20.5■□□□□ 0.87
NUP50-202ENST00000396096 TRAK2O60296 914 aa20.5■□□□□ 0.87
NUP50-202ENST00000396096 MCCP23508 829 aa20.5■□□□□ 0.87
NUP50-202ENST00000396096 CHRNA2Q15822 529 aa20.5■□□□□ 0.87
NUP50-202ENST00000396096 STRCQ7RTU9 1775 aa20.5■□□□□ 0.87
NUP50-202ENST00000396096 GLI3P10071 1580 aa20.5■□□□□ 0.87
NUP50-202ENST00000396096 CWF19L2Q2TBE0 894 aaKnown RBP20.5■□□□□ 0.87
NUP50-202ENST00000396096 LARP1Q6PKG0 1096 aaKnown RBP20.5■□□□□ 0.87
NUP50-202ENST00000396096 BRINP3Q76B58 766 aa20.5■□□□□ 0.87
NUP50-202ENST00000396096 ERC1Q8IUD2 1116 aa20.5■□□□□ 0.87
NUP50-202ENST00000396096 IL27Q8NEV9 243 aa20.5■□□□□ 0.87
NUP50-202ENST00000396096 HSPA2P54652 639 aa20.49■□□□□ 0.87
NUP50-202ENST00000396096 CWC22Q9HCG8 908 aaKnown RBP20.49■□□□□ 0.87
NUP50-202ENST00000396096 FOXD4L1Q9NU39 408 aa20.49■□□□□ 0.87
NUP50-202ENST00000396096 ZNF496Q96IT1 587 aaPredicted RBP20.48■□□□□ 0.87
NUP50-202ENST00000396096 SNRPA1P09661 255 aaKnown RBP20.47■□□□□ 0.87
NUP50-202ENST00000396096 LRP10Q7Z4F1 713 aa20.47■□□□□ 0.87
NUP50-202ENST00000396096 MCM2P49736 904 aa20.47■□□□□ 0.87
NUP50-202ENST00000396096 KAZALD1Q96I82 304 aa20.47■□□□□ 0.87
NUP50-202ENST00000396096 IGKV5-2P06315 115 aa20.46■□□□□ 0.87
NUP50-202ENST00000396096 NUCB2P80303 420 aa20.46■□□□□ 0.87
NUP50-202ENST00000396096 SOS2Q07890 1332 aaPredicted RBP20.46■□□□□ 0.87
NUP50-202ENST00000396096 CNTROBQ8N137 903 aa20.46■□□□□ 0.87
NUP50-202ENST00000396096 SUCLG2Q96I99 432 aa20.46■□□□□ 0.87
NUP50-202ENST00000396096 ABCA3Q99758 1704 aa20.46■□□□□ 0.87
NUP50-202ENST00000396096 GLRX3O76003 335 aaKnown RBP20.45■□□□□ 0.86
NUP50-202ENST00000396096 CYP2E1P05181 493 aaPredicted RBP20.45■□□□□ 0.86
NUP50-202ENST00000396096 OS9Q13438 667 aaPredicted RBP20.45■□□□□ 0.86
NUP50-202ENST00000396096 RIC3Q7Z5B4 369 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms